Neodiprion virginianus: 124301001
Help
Entry
124301001 CDS
T09046
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
nvg
Neodiprion virginianus
Pathway
nvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124301001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124301001
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124301001
U7-dependent histone pre-mRNA processing factors
124301001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
DUF908
Motif
Other DBs
NCBI-GeneID:
124301001
NCBI-ProteinID:
XP_046611537
LinkDB
All DBs
Position
1:5983022..5986001
Genome browser
AA seq
439 aa
AA seq
DB search
MSNSTISDQSLMDKSMRSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGY
GFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQSLLQGQNTENPYGEAVQ
ADKAPEAISKAVASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMR
IVDPQTAVNMLHKANPIPGVILPNDKPPLHPIVPRIEEPWTPRPAPTPVNPPAPIFAGQD
VDLRTLDRQIDPRLARMDQDLRGPPQVPPVPVSAPVIAPPSDPRAVSQSFALPEPTLPAE
GIESFGRDPRADRFGREPRDPRDPRMPVDPRIPKINPPAPGVTSVAPRPIVATPVPPPTT
SGINPTNPLSLSTPSTATSRLMAGMSPAGNIPSGASDQEKAALIMQVLQLSDEQIAMLPP
EQRQSILVLKEQIAKSTQR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcaactatttcagatcaatccctgatggataaatcaatgcggagtgttttt
gtcggaaatattccgtatgaagcaacagaggagaatttaaaggacatattcagcgaagtt
ggaccagttctctcattcaagctggtttttgacagagaaactggaaagccgaaaggatat
ggattttgcgagtataaggatcaagagacagcgcttagcgcaatgcgtaacctgaatggc
tatgaaataggtggaaggacactgagagtggacaatgcttgcacagaaaaaagtcggatg
gaaatgcaaagcctgcttcagggacagaacactgaaaatccttatggcgaggcagttcaa
gcagacaaggcaccagaggctataagcaaagcagttgcatcgttacctcctgaacagatg
tttgaattgatgaagcagatgaagctatgcgtgcaaaataatccaaacgaagcacgacaa
atgctactacagaacccgcagcttgcttatgccttgcttcaggcccaagttgtgatgaga
attgtcgaccctcaaactgcagtcaatatgctacataaagccaacccgattcctggtgtt
attttaccaaatgataagccaccgctgcatcctattgttccaagaatcgaagaaccctgg
actcctagacctgcaccaacaccagttaatccacctgctccaatttttgcagggcaggat
gtggatctgcgtactttagatagacaaattgatccaaggctggctagaatggatcaagac
ttacgagggccaccccaagtccctcctgttcctgtcagcgctccagttatagctcctcca
tcagatcccagagctgtatcacagagctttgctcttccagaacccactcttccagcggag
ggtatagagagtttcggtcgtgatccgagagctgacagattcggacgagaaccacgagac
ccacgtgaccctaggatgccagttgatcctcgaattcccaaaattaatccaccggctcct
ggggtcacgtctgtcgcacccagacccattgtggcaacaccggtgccaccccctacaaca
agtggtattaaccctactaatccactgagtctctcaacacccagtactgctacctcaagg
ttaatggcggggatgtcgcctgctggtaacattccaagtggtgcttctgaccaggaaaag
gcggcattgatcatgcaagtgttacaattatcagatgagcagattgctatgcttcctcca
gaacaaaggcagagtatcctagtgctcaaagaacaaatagcgaaaagcactcaacgttga
DBGET
integrated database retrieval system
