Neodiprion virginianus: 124301234
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Entry
124301234 CDS
T09046
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nvg
Neodiprion virginianus
Pathway
nvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124301234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124301234
Membrane trafficking [BR:
nvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
124301234
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Nbl1_Borealin_N
Motif
Other DBs
NCBI-GeneID:
124301234
NCBI-ProteinID:
XP_046611991
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Position
3:42453068..42462718
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AA seq
838 aa
AA seq
DB search
MMDWGWQFRSDSNVSLFFSQPMTPTMTGVEEQEKLLEDAVGVVKVQAFQMKHCLDKSRLM
DALKHASTMLGELRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVADLYELVQY
AGNIVPRLYLLITVGLVYIKTNPCLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNV
LPDVAEGVEQEGTVSTRERFPGMLLLQVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRER
REREREELRILVGTNLVRLSQLETVTLDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQ
VFPDEFHLQTLNAFLKSCAELQNGVNVKNIIISLIDRLAAFSQRSDGVGGPGSPSQLQGI
PTDVKLFDVFSDQVATIIQTRQDMPPEDIVSLQVALINLAHKCYPDRVDYIDKVLSTTVQ
IFQKLNIERLEYNSAVSRELSRLVKIPVDNYKNILTVLKLEHFAPLLEYFDYEGRKSLAV
YIITNILDNETLIPAQEQVDAVLSMVSPLVQDQPDQPTIEEDPEDFAEEQGLLGRLIHHF
KSETADQQYMILSAARKHFSTGGNKRIKYTLPPIVFQAYQLAFTYKSLKDQDDMWQKKCQ
KIFQFCHVTITALMKAELAELPLRLFLQGAIAIGEIRFDNFETVAYEFMSQAFSIYEDEI
SDSKAQLAAITLIIATFEQMSCFSEENAEPVRNQCALYASKLLKKPDQCRGVSTCSHIFW
SGKSIATGGKEMQDGNKVLDCLKKGIRIASQCMDTSVQVQLFVELLNHYIYFYEKGNAAL
SVQILNQVIAKIREELPNLEVSEETEQIQKHLANTLEHLRNRMESPESEGPSYQGLVL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatggactggggatggcagttcagatctgattctaacgtatctctgtttttttcgcag
ccaatgacaccaaccatgactggcgttgaggagcaagaaaaactattggaggatgccgtc
ggtgttgttaaggttcaggcctttcagatgaagcactgcctagataaatccaggctcatg
gatgcactaaaacatgcttcgaccatgctgggagagctccgcacctcgctgctgagtccc
aagagttactatgaactgtacatggcgataactgacgagcttcgacatctggaactttac
ttactagatgagtttcagaaagggagaaaagttgcagatctctatgagcttgttcaatat
gctggaaatattgtacctagattgtatctactcataacggtcggtctagtttatattaag
acaaatccctgcttgaagagagatctactgcgtgatttagtagaaatgtgccgtggagtt
cagcatccattgagagggttgtttttaagaaattatttactacaatgcacacgaaacgtg
ttgcctgacgtagctgagggagttgaacaagagggcacggtgagtacgcgagagcgtttc
ccgggaatgttgctgttgcaggtacgagacagtattgactttgtgttgatgaactttgct
gaaatgaataagctgtgggtcagaatgcagcatcagggtcacagcagagacagggaaaga
agagaaagggaacgcgaagagctacggatcctggtcggaacaaatttagtcagactcagc
cagttagagacggttacccttgacaaatacaagaagctggttttaccagggatattagaa
caggttgttagctgcagggatgcaatcgcgcaggaatacctcatggaatgcataattcag
gtgtttcctgatgaatttcacttacaaacgctgaatgcgtttctgaaatcatgtgccgag
ctgcaaaatggtgtaaatgtaaagaacatcattatttcattgattgacagactggccgct
ttcagtcagcgatcagatggagtcggtggaccaggaagcccaagtcaacttcaaggaatt
ccaacggatgtgaaattgttcgatgtatttagtgaccaagtggcgacgatcattcagacc
aggcaagacatgccacccgaagacattgtgtcgctccaagtagcgctcatcaatttagcg
cacaagtgttatccagacagagttgattacatcgacaaggttttgtcaaccacggtgcaa
atattccagaagctcaatattgaaagattagaatacaacagtgcagtttcaagggaatta
tccaggctggtgaaaatacctgtcgataactataagaacatactgaccgttttgaaactc
gaacattttgcaccacttttggaatacttcgattatgaaggaaggaaatcattggctgtt
tacataatcacgaatatcttggataatgaaaccctgatacctgcgcaagaacaagtcgac
gctgtcctgtcaatggtttctcctctggttcaagaccaaccagaccaaccaactattgaa
gaagatcccgaagattttgccgaagaacagggccttcttggtagactgattcatcatttt
aaatcggaaactgctgaccagcaatacatgattttgagtgcagcaagaaaacatttcagt
actggtggaaataagagaatcaagtacactctcccacccatcgtgtttcaagcttatcag
ctggcctttacctacaagagcctgaaagatcaagatgacatgtggcagaaaaagtgtcag
aaaatctttcaattctgtcacgtgacaatcaccgcattgatgaaagccgagcttgccgaa
cttccacttcggctttttctccaaggagccattgctattggtgaaattcgctttgataac
ttcgaaacagtcgcctatgaatttatgagtcaagctttctccatttacgaagatgagatt
agcgattcgaaagcccagttagctgccattacacttataatcgcaactttcgaacaaatg
agttgcttttccgaagagaatgctgaaccagttagaaaccagtgtgcactttacgctagc
aagttactgaagaagccagatcaatgcagaggggtgtctacttgttcccacatattctgg
tctggaaagtcaattgccactggtggtaaagagatgcaagacgggaacaaagtactggat
tgcttgaaaaagggaattagaatagcgagccagtgcatggatacgtctgtccaagttcaa
ctttttgttgaattgcttaatcattatatttacttttacgaaaaaggaaatgcagcgttg
agcgtacaaattttgaaccaagtgattgccaagataagggaggaattgccaaacctcgag
gttagcgaagaaacggaacagattcaaaaacatttagcaaatactctagaacaccttcgg
aaccggatggagtctcccgaatcggaaggtccatcgtatcaaggtctcgtactgtaa
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