Neodiprion virginianus: 124301271
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Entry
124301271 CDS
T09046
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124301271
03036 Chromosome and associated proteins [BR:
nvg03036
]
124301271
Spliceosome [BR:
nvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124301271
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
124301271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
Lsm_interact
RRM_10
GlcNAc-1_reg
Smg4_UPF3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124301271
NCBI-ProteinID:
XP_046612075
LinkDB
All DBs
Position
3:complement(27039960..27044033)
Genome browser
AA seq
928 aa
AA seq
DB search
MDEMELENPGEDEKNDSDFLLDSDGEQGNNLDNSNYNMIEDEADFEKELGMDDNDIDDDS
DSDDEEANEAEIKLLNAKLEESPYDYSSHVALITKLQEMGQKYSDQLKSAREAMSSKYPL
SSELWLSWLRDEISSVKTSAEREAVTKLCERAVKDYLSVEVWLEYLQFAIGSLGTATDAA
TDVRNLFERGLTCVGLHVTKGAIIWEAFREFENVLVLMIDASNESERKEQINRVGSLFRR
QLTCPLLDMEKTYEEYEVWRAGDGAQATLDDNVVLTGYERAFAKLNLRLPFEEKLISAQG
EPELLDAFKAYLRFEKQHGDPARVNILYERAIAELSLEGSLWLEYITYMENNIKIQSILE
PLYERATRNVPWYVVIWQKWLRAYERWDKPLTEVQALLEKGLMAGFTSAEEYRSMWLTYL
EYLRRRIDLFPDDKKKLLEIIRETFNRACEYLAKAFGLEGDPGCVVLQYWARTEAIHAND
MEKARTLWADILSQGHSTAAASWLEYIGLERCYGDTKHLRKLYQKALGSVKDWPESIINA
WLDFERDEGTLEQLESCEAKTKEKLEMVVEERKKVQAAALPHEVTSAPAKRAGKRKPEDT
GRWKNLQGSPNKQGKFEATTRPKLKESVLSVENKITPPPGYKPSKDESSTKPKLAPPPGY
KSKEVEKMDEDNSRTVDERITVFVSNLDYNATEDEVRNALEPAGPITLFKMVQDFKGRSK
GFCYVQLSSADSVELALKLDRTPINGRPMFVSRCDPDKTTRGPAFKYSCGLEKNKLFVKG
LPLTMTKEQIEELFGAHGILKEVRLVTYRNGHSKGIAYIDFKSEVDASKALIATDGMTIE
DKVISVAVSQPPERKKGSINDDVSLIKSLGGTTTSRTGSNAPKTMLSMIPRSVKPLSKNG
DAGISGNVVGKESLSNADFRNLLLKNKK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatggagttggaaaatcctggcgaggacgagaaaaatgacagcgatttcctt
ttggactctgatggagaacagggtaataatcttgataattccaactacaatatgatagaa
gacgaagcagattttgaaaaagaattaggaatggatgacaatgatattgacgacgacagc
gattctgatgacgaagaggctaacgaagcagaaatcaaactcttgaatgctaagctggaa
gaaagtccctatgattattctagccatgttgctttgataacaaaattgcaagagatgggc
cagaaatattcagatcaactgaagagtgccagagaagctatgagctccaagtatcctctt
agctctgaactatggctttcctggttgcgagacgaaatcagctcagttaaaaccagcgct
gaacgagaggcggtcacaaagttgtgcgagcgagcagtaaaagactatctttctgtggaa
gtttggttggaatatcttcagttcgctataggaagtttgggtactgctactgacgctgct
acagatgttagaaatttgtttgaacggggattaacctgcgttggcttgcacgttaccaaa
ggcgcgatcatatgggaagcatttagagaatttgaaaatgtgttagttttaatgatagac
gcatctaacgagtcggagcgcaaagaacagataaatcgcgttggctctttattcagacgt
cagttaacatgtcctctacttgacatggagaaaacgtatgaagaatatgaagtgtggcgc
gctggcgacggagcacaagcaaccctagacgacaatgttgttttaactggctatgaacga
gcgttcgcaaaactgaacttgcgtttaccttttgaagaaaaacttatctcagctcaaggt
gagcctgaattattagatgcctttaaagcatatctacgttttgaaaaacaacacggagat
ccagcacgtgtcaatatactttacgaacgagccatagctgagcttagtttggaaggttcg
ctgtggctggaatatattacatacatggaaaataatataaaaatccaatccattttggaa
ccactatacgaaagagctactagaaatgtaccatggtatgtagtaatttggcaaaaatgg
ttaagagcctatgaaagatgggataaaccattaaccgaagtgcaggcattactggagaaa
ggtttaatggctggtttcacatctgctgaagaatatcgcagtatgtggctgacttacctt
gagtatctacgtcgcaggattgatctattcccggatgacaagaaaaaactcttggaaatt
atcagagaaacattcaatcgcgcttgtgaatatttggcaaaagcattcggtctggagggc
gatcccggatgtgtggtattgcagtactgggccagaaccgaagcaattcatgcaaatgac
atggaaaaggctagaaccttgtgggctgatatactctctcaaggacattccacagctgct
gccagttggttggaatatattggtttggaaagatgttacggagatacaaagcatcttcgt
aaattgtaccaaaaagcactgggatctgtcaaagattggccagagagcataatcaatgct
tggttagattttgagcgggatgaagggacattggaacagttagaatcctgtgaggcgaaa
acaaaagagaaattagaaatggttgtcgaagagcgaaagaaggtacaagctgctgctttg
ccacatgaagttacgtctgcaccagccaaacgggcaggcaaaagaaaacctgaagataca
ggtagatggaaaaacttgcaaggatctccgaataagcaaggaaagtttgaagcaactacg
aggccaaagctgaaggaaagtgttctaagtgtggagaataaaataacaccaccacctggc
tataagccatctaaagacgaatccagcaccaagccgaaacttgcaccaccgccaggatat
aagtcaaaagaagttgaaaagatggatgaagataactcgcgcaccgttgatgagagaata
accgtttttgttagcaacttggactacaatgcaacggaagatgaagtaagaaacgcctta
gaacctgcaggaccaattactctttttaaaatggtacaagatttcaaaggtcgcagtaaa
gggttctgttacgtgcagcttagcagtgcagatagtgttgagttggcacttaagttagat
agaacaccaattaacggccgacccatgtttgtttctcgatgcgatcctgataaaacaacc
agaggaccagcattcaagtatagctgtggattggaaaagaacaaactctttgtaaaaggt
cttcctttgacgatgacaaaggagcaaattgaagaactcttcggtgctcatggtatccta
aaggaagttcgccttgtaacgtatcgcaatgggcactctaaaggtattgcctacattgat
tttaaaagcgaagttgacgcgagcaaagcactgatagctactgatggaatgaccatagaa
gacaaagtaatcagtgttgctgtcagtcagcctcctgaacgcaaaaagggatcgatcaat
gacgacgttagtcttattaaatctcttggtggaacaaccacaagccgaactggttccaat
gcgccaaaaactatgctttctatgataccacgcagtgtgaaacctctgtctaaaaatggc
gatgcaggaatatcaggtaacgttgttggcaaggaatcactgagtaatgcagattttaga
aatctgctacttaaaaataaaaaataa
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