Neodiprion virginianus: 124301356
Help
Entry
124301356 CDS
T09046
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124301356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124301356
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124301356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Phage_tail_terminator_7
Motif
Other DBs
NCBI-GeneID:
124301356
NCBI-ProteinID:
XP_046612237
LinkDB
All DBs
Position
3:complement(32632800..32638204)
Genome browser
AA seq
605 aa
AA seq
DB search
MSFGTGFGTSTPSATPNFGFGAQASGTATAAKPTGFGTPSFGFGTPATSAPALGGFGTPA
TQAPAFGTSGGFGTSTVGGFGTPATSTITFGTPGSSFGFGTGAGFGGTPATSSTAFSGFG
TTATTSSTGFGGFGSFPTMATSSAPSLFGGFSTSGTTTTGFGTTGFGGFGAKPAAVNTTG
FSSFGTGSGLTGLGTTLTQPQQQQQQQQPQQQSVNAISEALYNAVFNCQLFNDERDNTIA
RWNLIQALWGTGKAYYSSVAPPIDLTQENPLCRFKAIGYSCMPDADNNDGLVVICFNKKE
QELKDGKQTLITSLNTILGNKPNLTLTVDTIKSTDDNKSHVTICVAEKGVTGLSRKIPAN
ELVSFFTQTMQKQQLAQMGVENIFPQVKLDPSQLKEYLDNPPSSIDPRLWKQAQLDNPNP
EKYIPVPMIGFNQVKYRLKCQEEETAKHRAFLDLAAERIQSLQRQHTATQARLKEHRRNL
LELQHRVLQVLVRQEITRKVGLALQPEEEVLTNRFEAMHSQISAPTQFKGRISEMLSQLR
MRRHMDSQNHERYTMDPIAQDDIKTYLTMEQQGMSQLISTINADLECLKIIKDGMSDLLT
SHSIS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttggtactggatttgggacttctaccccctcagcaacaccaaattttggattt
ggggcgcaagcttcaggcacagccacagcagcgaaaccgactggttttggtacaccatcg
tttggattcggcactccggctacatcagcaccagctcttggaggatttggtacccctgca
acacaagcacctgcctttggaactagcggtggctttggtacatcaacagtcggaggattt
ggaacaccagccacgagtacgataacatttggcactccaggttcatcttttgggtttggg
acaggtgcaggatttggtggtacgccagcaacttcatctacggcattcagtggatttggg
acaactgcgactacaagttcaacaggtttcggtggatttggctcgttcccaaccatggcg
acatcttcagcaccgagcttatttggtggctttagcacatcaggcacaacaacaacagga
ttcggcacaacaggatttggtggatttggtgctaagccagctgcagtaaatacaacaggc
ttcagcagctttggaacaggttctggtcttactgggttaggaacaactcttacccaaccg
caacaacagcagcaacagcaacaaccgcagcaacaatctgtgaatgcgatatcggaagca
ctttataatgcagtatttaactgccaactttttaatgacgaacgtgataataccatagca
agatggaacttgatccaagcattatggggtactggaaaagcttactactcgtcagtggca
cctcctatagatttgacacaagaaaatcctttgtgtagattcaaagctattggttatagc
tgtatgccagatgcagataacaatgatggactggtcgttatttgtttcaacaaaaaagaa
caggaattaaaagatggaaaacagacgttgatcacatcactcaacaccattctcggaaat
aaaccaaatttaacattaactgttgatactataaaatcgacagatgacaataaaagtcac
gtgacaatttgcgtagctgaaaaaggtgtgacaggattgtctaggaaaattccggcaaac
gagttagttagtttctttacacagactatgcaaaaacaacagctggcccaaatgggcgtg
gaaaatatttttccacaggttaaattagaccctagtcaactgaaggaatatttggataac
ccaccgtcgtctattgatcccagattatggaagcaagcgcaattagataatccaaaccca
gagaaatatattccagtgccaatgattgggttcaatcaagttaaatatagattgaaatgc
caagaagaagaaacagccaagcatagagcatttctagacttggctgcagaaagaattcaa
agtttacagagacaacacactgcaactcaagcaagattgaaagaacatcgacgaaattta
ctcgagctgcaacaccgagttttacaggtgctggttcgtcaagaaataacgcgcaaggtt
gggttagcattacaacctgaagaagaagtgctaacaaataggtttgaagcaatgcattcg
caaataagtgctccgacacagtttaagggaagaatcagtgaaatgctttcacaactgaga
atgagacggcatatggactctcaaaaccacgaacgatatactatggatcctattgcccaa
gacgatattaaaacctatttaactatggaacagcaaggaatgtctcaactcatttctaca
atcaacgctgatctggagtgcctgaaaataattaaggatggcatgtccgatctcctcacg
agtcacagcatctcttga
DBGET
integrated database retrieval system
