Neodiprion virginianus: 124301562
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Entry
124301562 CDS
T09046
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124301562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124301562
Enzymes [BR:
nvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124301562
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124301562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4600
Motif
Other DBs
NCBI-GeneID:
124301562
NCBI-ProteinID:
XP_046612722
LinkDB
All DBs
Position
1:complement(9259339..9266126)
Genome browser
AA seq
1385 aa
AA seq
DB search
MVKELYRETAVARKISHVTFGIDNRHNMERQAHIHVVSKNLYSQDSHRSPVPYGVLDRKM
GTCSNQDSCTTCGKTLNECIGHFGYIDLELPVFHVGYFRSVINILQTICKKCSHVMLKET
EKKSYMLRVLNPNIGYLTRKALRKQILEKAKKNSTCPNCGDLNGTIKKAGLLKIVHEKYK
NKKTVDMAVKRRLAEYNNVLEENRELEGILQSGLLHVLNPIEVQGILERIPVSDVPLLLM
NPDCSLPKDLILTRIPVPPICIRPSVVSDVKAGTNEDNLTMKLSEIVFINDVIQKHRQSG
AKVQMYNEDWEFLQLHCALYVNSEMSGIPLNMQPKKSGRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIEQVGVPIYVAKILTYPERVNASNIELMRKLVQNGPDVHPGANF
VQQRSTEFKKFLRYGNRLKISQELKYGDIVERHLRDDDVVLFNRQPSLHKLSIMAHKAKV
LEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELLIA
ATQDFITGGYLLTQKDTFLNKSQACQLASCLLAGDDASMNIDLPEPAIMKPVELWTGKQI
FSLILKPNKKCPIRANLKTKGRAYTSNEELCINDSFVIIRNSELLAGSMDKSTLGSGSKQ
NIFYVLLRDWGEDASTTAMWRLARVASYYLMNRGFSIGISDVTPGQGLLKAKHDLLTAGY
SKCTEYITQMESGRLICQPGCSEEESLEAMILKELSVIRDHAGKACLKELHPSNSPLVMA
LSGSKGSFINISQMIACVGQQAISGKRVPNGFEDRALPHFGRHSKVPAAKGFVENSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLHYDMTVRNSVGDIVQIL
YGGDGLDPTYMEGKDCPVDYKRVLDHTRAKSPYRDEQPLDGTSVISATTELLKSEDYSCL
SDEFKQELETFLKSVAHKINRLRHNATSKSSAVQQLERLTVSQLVEFMHTCKEKYMRAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINANSNISTPIITA
ALENDTDPEFARRVKGRIEKTTLGEVTEYIEEVYLPDDCFLLIKLDVDRIKLLKLEVDAN
SIRYSICTSKLHLNPKLVNVRGDSIITVNPNKQKLNINYALMQLKETVPNVVIKGLPSVA
RAVIHNDDSTGKTRYRLFVEGDNMREVMATPGVLGKKTTSNNTMEVFKTLGIEAARATIM
TEIKLVMENHGMSIDRRHPMLVADLMTSRGEVLGITRHGLSKMKESVLNLASFEKTADHL
FDAAYYGQKDTISGVSESIIVGIPVPVGTGIFKLLHKAEDSKPERRQLIFDDPQYHKKIT
KPTTS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaattgtacagggaaactgcggtggcccgcaaaatttcccatgtcacgttt
ggaattgacaaccgtcataacatggagcggcaagcccatatccatgtcgtctccaaaaat
ctctacagtcaggacagccatcgttcgccagtgccttatggtgttctcgatagaaaaatg
ggaacatgctccaatcaggacagctgtaccacatgtggtaaaacattgaacgaatgtatc
gggcactttggatacattgatttggaactgccagtatttcatgtgggatattttagatct
gtgataaacatccttcaaacaatatgcaagaaatgttcacacgtgatgctgaaagagaca
gagaaaaaaagttacatgttgcgtgtattgaatccaaatataggatacttgactcgtaaa
gcactgagaaaacaaatactggaaaaggcaaagaaaaattctacgtgtccaaattgtggg
gatttaaatggaacaattaaaaaagcagggttgttaaaaattgttcatgagaaatataag
aacaaaaaaacagttgatatggcggtgaaacgaagactggccgaatataacaatgtattg
gaagagaacagagaactagaagggattcttcaaagtggactgcttcatgtcttgaacccc
attgaggttcaaggtatcctggagcgtataccagtatcagatgtgcctcttctgctaatg
aatcctgactgttcgctaccaaaagatttaattttaacaagaattcccgtgcctccaatt
tgcattaggccgagcgttgtctccgacgtaaaggcaggcacaaatgaggataatttaaca
atgaaactgtcagaaattgtcttcattaatgacgttattcaaaaacatagacaaagcgga
gccaaggtgcagatgtataacgaagattgggaatttttgcagttgcattgcgctctttat
gtcaatagcgaaatgtccggtatcccactaaacatgcagcctaaaaagtctggtcgaggt
ttagttcagcgcctcaaaggaaaacaaggcagatttcgcggcaacttatctggaaaacgt
gttgatttttcgagcagaactgtgatttcgccagatcccaatttacgcattgaacaggta
ggagtaccgatttatgttgcaaaaatcttgacatatccagaaagggtgaatgcttctaac
atagaattaatgcgtaaattggtgcaaaatggtcctgacgttcacccaggagctaatttt
gtacaacaaagaagtacagaatttaaaaaatttttgcgctatggaaatagattgaagatt
tcccaggaactaaagtatggagacatcgttgagagacatctccgagacgacgatgttgtc
ttattcaatcgacaaccttcactacataagctcagtataatggctcataaagccaaagta
ttagaacaccgaaccttcagatttaacgaatgtgtctgcacgccttacaatgccgacttt
gatggtgatgaaatgaacctacatttaccacaaactgaggaagctagagccgaggcacta
gtattaatggggaacaaatcaaatttagtaacaccgcgaaatggcgagctgctgatcgct
gctactcaggattttataactggtggatatcttttaacgcaaaaggatacattcctcaat
aaatcgcaagcttgtcaattggcgagttgtcttctggcgggagatgatgcatcaatgaac
attgatctgccagaaccagctattatgaaaccagtagaactgtggacgggtaaacaaatt
tttagtttgatactaaagccgaataaaaaatgtccaattagagccaacttgaaaaccaag
ggcagagcatacactagtaacgaagagctgtgcattaatgattcgtttgtaataatccgt
aattctgaactcctcgctggatctatggacaagtctacgctaggttccggatctaagcaa
aatattttttacgttttattgagagactggggagaagacgcttcaacgacagctatgtgg
cgtttagctcgagttgcaagctactatcttatgaacagaggtttttcaattggaatcagt
gacgtcacacctggacaaggcctgctcaaagctaaacacgatcttcttactgctgggtat
tcgaagtgtactgaatacataactcaaatggaatctggaaggttgatttgtcagccaggt
tgttctgaagaagaaagtctggaggcaatgattttgaaagaattatctgttattcgtgat
cacgcaggaaaagcctgtttgaaggaactgcatccaagtaacagtcccctggtcatggct
ctctctggtagcaagggcagctttattaacatttcacaaatgattgcttgcgtcggacaa
caagctatcagtgggaaacgtgtaccaaacgggtttgaggatcgtgctctgccgcacttt
gggcgtcattccaaagttcccgcagccaaaggctttgtagaaaactcattctattctggt
cttactccaactgaattctttttccacacaatgggaggcagagaaggtctcgtagacaca
gctgtaaaaactgcagagacaggatatatgcaaagaagattggtcaaaagtttggaggat
ctttgcctccactatgatatgacggtcagaaattctgtcggagatattgtgcaaattttg
tatggcggagatggtttagatccaacgtacatggagggaaaggactgtccagtcgattat
aaaagagtcttggatcacacacgagcaaagtctccctacagagatgagcaacctttggat
ggaacaagtgtaattagtgctacgactgagctgttgaaatctgaggactactcatgcctg
agtgacgagtttaagcaagaactagaaacattcctgaagtccgtcgcgcacaagataaat
aggctgcgacacaatgctacgtcaaaatcctcagctgttcaacaattggaacgtctcacg
gtatctcaattggtggaatttatgcatacgtgtaaggaaaaatacatgagagcaaagatt
gaaccaggcacagcggttggagctcttgctgcacaaagtattggtgaaccaggcactcaa
atgacattaaaaactttccactttgctggtgtcgcctccatgaatattacacagggtgtt
cctcgtataaaagaaatcattaatgctaatagtaatatcagtacacctatcattaccgcc
gctttggaaaatgatacagatccagaatttgcaagacgagttaaaggtagaatagaaaaa
acaacattaggtgaagttacggaatacatcgaagaagtatatctaccagatgactgtttt
cttttaattaagttagatgtcgacaggataaaacttctgaaattggaagttgatgcaaat
tctattcgttactcaatttgcacatcgaaacttcatctaaatccaaaactcgtcaatgta
agaggggattcaattattacagtgaatcctaacaagcagaaacttaacataaactatgct
ctcatgcaactcaaagaaactgttccaaacgttgtcataaagggtctgccgtctgttgcc
agagcagtaattcacaatgacgactccaccggaaagactagatacagattgttcgttgaa
ggtgataatatgcgcgaggtcatggccacgcctggggtcttagggaaaaaaactacatct
aataatacgatggaggtattcaaaacattgggaattgaggctgctcgagcaacgatcatg
acggagatcaaattagtaatggagaatcatggtatgagcatagacaggcgtcatcctatg
ttagtagctgatttaatgactagcagaggggaagttcttggcatcacccgtcatggtctt
tctaaaatgaaagagtctgtgctcaacttagcctcttttgagaaaacagcagaccatcta
ttcgacgcagcttactacggacagaaggataccatctctggcgtatccgagtcaattatc
gttggtattccagtccctgttggcacaggaatcttcaagttacttcacaaagctgaggat
agtaaacctgaaaggagacagctgatatttgatgacccgcaatatcacaagaagataacg
aaacctaccacgtcctag
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