Neodiprion virginianus: 124301585
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Entry
124301585 CDS
T09046
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
nvg
Neodiprion virginianus
Pathway
nvg04145
Phagosome
nvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124301585
09142 Cell motility
04814 Motor proteins
124301585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvg03036
]
124301585
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nvg04812
]
124301585
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
124301585
Cytoskeleton proteins [BR:
nvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124301585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Dynein_IC2
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
124301585
NCBI-ProteinID:
XP_046612782
LinkDB
All DBs
Position
1:complement(9202660..9217908)
Genome browser
AA seq
723 aa
AA seq
DB search
MMSDRKAELERKKAKLQAIREEKERRRKEKEQKDVEEATVRAAGADKDHRKDLDAMLSSL
GVAPVSDVLSSLSSMNSLTPEQSANATPDASLQPSSINSVQSIPGRRKAPRDLTAVSVAH
TDIPPKEPVVYSKQTQTAQTTHTSHDGLSTSSSAYSIFSSCSTTTPTHSCSAGYFETDWW
RPRKGGSAPNYLSHAFGYYDEYNLNPGLEWEDEFTVLTFDDGQAEDEESSLPHMDGFQSK
LPPGILPHGLPQVKEVQPAVTQVEQEKEKEKPKEVRELSEEEKLMTILSEEFQRFLDRSS
RVVERALGESVDIYTDYTGIIDGEDGIDEKSHQRLSLNRSFFCDRWSRNRCITSLDWSPQ
FPELLAASYKNNDDTPNDPDGVCLIWNTKFKKTTPEYIFHCQSSVMATTFARFHPNLILG
GTYSGQIVLWDNRVQKRTPIQRTPLSASAHTHPVYCLSVVGTQNAHNLISISTDGKLCSW
NLDMLSHPQETLELQARQSKPVAVTSLAFPSGDVNNFIVGSEDGTVYSACRHGTKAGVTE
TYEGHLGPVTGVSAHAVQGGIDFSHLFLTSSIDWTIKLWSLKENKPLYSFEHNGDYVYDV
AWSPTHPALFAAVDGSGRLDLWNLNQDTEVPAASIIVDGCPALNTVSWTPSGLHVTVGDD
TGKIWVYDVAENFAHPRIDEWNNFLYTQQDLKNNKADEELDKLNLSSGPSSLISMPSLSG
PIR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggatcgaaaagcagaattagaacggaagaaggccaagctgcaggcgattcga
gaggaaaaggaaaggcggcgtaaagaaaaggaacaaaaagatgttgaggaagcgactgta
cgagctgcaggtgccgataaagaccatcggaaagacttagatgccatgttatcatccctt
ggggtagcaccagtatcagatgtattatccagtctctctagtatgaactctttgacgcca
gagcaaagtgccaatgctacaccagacgcaagtttacaaccttccagtatcaattctgtt
caaagtattccaggaaggcgaaaggctccacgtgatttaacagctgtttctgtggcgcat
accgatataccacccaaggaacctgtggtatatagtaagcagacgcaaactgctcagacg
acgcacacttctcacgacggactgtccacctcttcctccgcatactcgatcttctcctcc
tgttcaacaaccacaccaactcactcttgctccgcaggctactttgagaccgactggtgg
cgtcccaggaaaggtgggtctgcaccaaactacctatctcatgcattcggctattacgac
gagtacaatctaaatcctggtttagagtgggaggacgagtttacagttttgacatttgat
gatggccaagccgaggatgaagaaagcagtctgccccacatggatggattccaaagtaaa
cttccacctggaattttgcctcatggactaccgcaagtcaaagaggttcaaccggccgtt
acgcaagtcgaacaggagaaggaaaaagaaaaacccaaagaagtaagagagcttagcgag
gaagaaaaattgatgactatcctctcggaagaatttcaacgattcttggaccgttcgagc
agagtggtggaaagagctctcggtgaatcggtagatatttacacagattatactggtata
atcgatggagaagatggaattgatgaaaagagtcatcagcgtctatcgctgaatcgttca
tttttctgtgatcgatggtcacgtaatcgctgcattacttcgttggattggtcaccgcaa
tttccagaactgttggctgcttcttacaaaaacaatgacgacacaccaaatgatccagat
ggagtttgtttaatctggaacactaaatttaagaaaacaacacctgaatacatttttcat
tgccagtcgtcagtaatggcaacaacctttgctaggtttcatccaaatttaattttgggt
ggcacctattcggggcaaattgttctgtgggataatagggttcaaaaaaggacccccatt
cagcgtactccactttcagcgtctgcacacacgcatcctgtgtattgtttaagcgtagta
ggaactcaaaatgcgcacaatttgatcagcatttcaacagatggaaaattatgctcgtgg
aatttagacatgttgtcccatcctcaagaaacgcttgagcttcaagcaagacagtcgaaa
ccagtcgctgtaacttcgcttgcttttccaagtggagatgtcaacaattttatcgttggc
agtgaagacggtactgtttattcagcttgccgtcatgggaccaaagctggtgtcacagaa
acttacgaaggacacttaggacctgttaccggagtcagtgctcatgcagttcaagggggc
attgatttctcgcatctgtttttaacttcgtctattgattggacgattaaattgtggagt
ttgaaagagaacaagcctttatactcatttgagcataatggagattatgtgtacgatgtt
gcatggtctcctacacatcctgctctatttgcagctgttgatggatctggtcgtttagat
ttatggaatttaaatcaggatacagaggttccagcagcgagcataatcgttgatggatgt
cctgctttaaacacagtctcttggacgccaagcggactgcatgttactgtgggcgatgat
actgggaaaatatgggtttacgatgtagctgagaatttcgctcatccacgaatcgacgaa
tggaataatttcctctacacccagcaagatctgaagaacaacaaggccgatgaagagttg
gataagctcaacttgagttcaggcccttcatctttgatatccatgccatctttgtcgggt
ccgatcagataa
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