Neodiprion virginianus: 124301747
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Entry
124301747 CDS
T09046
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvg01009
]
124301747
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124301747
Protein phosphatases and associated proteins [BR:
nvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124301747
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124301747
mRNA cycle factors
Stress granule specific factors
124301747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
124301747
NCBI-ProteinID:
XP_046613083
LinkDB
All DBs
Position
4:22701765..22717072
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AA seq
819 aa
AA seq
DB search
MLRHQHHSMQNQLREQNRMAGPMHPMQQHPHQPQHPHQHRSPHIPHPQQQLAMAAHQHPP
HQIPHGIAPQNNPRQPVLLGINSQHTNARHCFAIVASLLLLLNVTEAKKHLSSLNYTAED
LRLFFGPTGCIEGVMANVGLIDQSNTVAGTLPTQLTVQQGQHQTDQLSQQQLHNQQNAEQ
NNSPPNEDNGESRDQSPSNQNQINTNNTNLANMKEKTPMCLVNELARFNKIQHQYRLTNE
EGPAHKKKFTVTLKLGDEEFVAEGPSIKKAQHSAATKALEDTWYRHPPPKPARAMRILHP
GKCPAASEHLPPTVELNALAMKRGEPTVYTFSQAPPAPLQQFVPHGYGNFPRMLTPRYPT
YNRGFQSQQQGLYVVTLKVGDREFLGRGVTGQAARHDAASRALEQLRQLPLPEEITNTCA
ANDNGTLNGIDDPNAELKSPVSLVHETALKRGLSVNFEVVSERGKPHIRIFVTKCTVGDR
TTTGEGSSKKVSKKRAAELMLDELKRLPPIPLTIQTPSVQRLKRKPPATKKKSRNLIKVY
QEPRTEPEAAEEVNPISRLIQIQQAKREREPVYTLVDEKGAPRRREFIMEVTVGSNSAQG
VGPNKKLAKRAAAEALLMQLGYSKPQPQPVKPSIKTGDNENSEGKPRKVTFLEEDQVNEI
PNHSVGGTTGRQLVPGLLLVDGGQESKLGGGPSVQAVAEELRGQQQHQTPVVSPKDQLRY
LAQLLSFDIQFSDFPKGNHNEFLSLVSLSTDPPQVCHGAGPTTDASRDQAALTALRTLSK
LGLDNVTNPQNKKDKGASGDGLHISNQVKNTMLNGAIIK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgacaccaacatcattcgatgcaaaatcaactcagagagcagaataggatggca
ggacctatgcatccgatgcagcagcatccacaccagccgcagcatcctcatcaacatcga
agtccacacataccgcaccctcaacaacaattagcgatggctgcgcatcaacatcctcct
caccaaataccacacggtatcgctcctcagaacaatcctcgacagccagtgttgcttgga
atcaactcgcaacacactaatgcccgccactgttttgcaatagtggcaagtctgttactt
ctactaaatgtcacagaggcaaaaaaacatctttcctcgttaaactacactgccgaagac
ttacgactcttttttggaccaacaggttgcatagaaggcgtaatggctaatgttggatta
atcgaccagagcaatacagttgctggtactcttcccactcaactcactgttcaacaagga
caacatcaaactgaccaactgtctcaacagcaactgcataatcaacagaatgcggaacag
aataattcacctccgaatgaagacaacggagagtccagggaccagagtccatcaaatcag
aaccaaatcaacacaaataatacaaatttggcaaacatgaaagagaaaactccgatgtgt
ctcgtcaatgaactcgcaagatttaataaaatccaacaccagtatagattaaccaatgaa
gaaggccctgcacataaaaaaaagtttactgttactctaaaacttggtgatgaagaattt
gttgccgaaggtccaagcattaaaaaagcacagcatagcgcagccacaaaagcacttgaa
gatacctggtacagacatccaccgccgaaaccagcaagggcaatgaggatcttacatcca
ggaaaatgtcctgctgcttctgaacatctaccaccaacagtggaattaaacgctttagca
atgaaacgtggtgaaccaacagtttacacatttagccaggctcctccagcccctctgcaa
cagtttgtgccacatggatatggaaactttcctcgaatgctgaccccacgttatccaacc
tataaccgtggatttcaatcacagcagcaaggactctatgttgtaacattaaaggttgga
gatcgcgaatttcttggaagaggtgttactggacaggctgcacgccacgacgctgctagc
cgagctttggaacaactgcgccagctaccattgcctgaagaaataacaaacacttgtgct
gcaaacgacaatggaacattgaatggaatagatgatcctaatgcggaattgaaaagccct
gtttcgcttgttcatgagacggcattgaaacgaggcctttcggtaaacttcgaagttgta
tcagaacgaggcaagccacatatccgaatttttgttaccaaatgtacagttggggataga
actacaactggagagggatcatcaaagaaggtatcgaaaaagcgtgccgcagaattaatg
ctggatgagttaaaacgcctccctcctattcctcttacaattcaaactccctctgtacag
cgtttaaaacgaaaaccaccagcaaccaaaaaaaaatcacgaaatctcataaaagtttat
caagaacctcgcactgagcctgaggcggccgaggaagtgaatcccatttctcgtctcatc
caaattcaacaagcaaaacgcgaaagagaaccggtttatacacttgtagatgaaaagggc
gctccacgacgtagagaattcatcatggaagttactgtcggatcaaattctgctcaagga
gttgggccaaataagaaattagctaaacgagctgctgctgaagcactactaatgcaattg
ggatatagtaaaccacagcctcagccagttaagccttcaatcaagacaggagataatgaa
aattctgagggaaaaccaaggaaggttacgttcttagaagaagatcaggtcaacgaaatt
ccgaatcattctgttggcggtacaactggacgacaactagttcccgggcttctgttggta
gatggaggccaggaatcaaaacttggtggaggacccagtgttcaagctgtagctgaggaa
ttacgtggtcagcaacagcatcagacccccgttgtttcccccaaagatcagttgaggtat
ttggctcagctactaagctttgacatacagttcagcgactttccaaagggcaaccataac
gaattcctttctcttgtctctctgagcactgatccgccccaggtgtgtcatggtgctgga
ccaacaacagatgcaagtcgagatcaagctgcgctcacagctttgcgcactctcagcaag
cttggcttagacaatgtaacaaacccgcaaaacaaaaaagataagggagcctcaggggat
ggcttacacattagtaatcaagttaaaaacaccatgctaaatggagccattatcaaataa
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