Neodiprion virginianus: 124301939
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Entry
124301939 CDS
T09046
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124301939
Membrane trafficking [BR:
nvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124301939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
Vgb_lyase
EGF_3
Motif
Other DBs
NCBI-GeneID:
124301939
NCBI-ProteinID:
XP_046613544
LinkDB
All DBs
Position
1:29459074..29488898
Genome browser
AA seq
939 aa
AA seq
DB search
MGWSYIRRLTAAASSLLFVLAITASVNLVHGFSTESAGACPLRQYRCDNAKCIPVTWVCD
GDNDCEDNSDERTEECKSTKACTDAEFRCTNGRCILKNWQCDGENDCPDGSDENPSICRI
RRCSEREFECSPGVCITNVWVCDNHEDCADGSDEKNCRRSKNCTAEQFTCRGSIGQCVPL
TWMCDDHPDCMDRSDETDCNNTCRADEFTCDNKHCIQRHWVCDHDDDCGDGSDEKDCQPS
TCQPDTQFTCAKGYCITSRWRCDGDSDCPDGSDEMGCTDRPAKDKMNHCGVHEFSCDDHI
TCIRQSWVCDGGRDCPDGADESPSNCGSVTCRPDQFQCSDRSCISGRFFCDGIKNCPDGA
DEKNCTAADVVCDPLKQFDCGHGSCIPLSSLCDGKPDCLGWEDEPLDLCKKNECLVNNGG
CSQICVDLPIGFRCECRNGYRLINNQTCDDVDECLEPGSCSQFCKNEKGTFKCSCDAGYL
RDPRDLTRCKAAEGHASLLFARRHDIRKVALDRPEMTAIVNNTKMATALDFVFRTGMIFW
SDVSDKKIYKAPIDEGNERTVVIDRDLTTSDGLAVDWIYNHIYWTDAEKNTIELANFEGN
MRKTLIKDRVQEPRAIAVNPLEGWMFWTDWGDDARIERAGMDGSHRSIIVGTEVRWPNGL
TLDLVGKKLYWVDAKLNKIASCNYDGSGRRTVLYSPDILRHPFSITTFEDYIFWTDWDKE
AIFKANKFTGKEVEAITSVRSVQHPMAVHVYHPYRQPDGKNQCQAVNGHCSHLCLPAPKI
SAKSPLLSCACPDGLRLLPDGLMCVENVTTTVAPTTQAVTVPFKRFEPPKVTGSSRPTNG
TDGNGGAGFSEENTDRGIVAGIVIGVVTVGLALLALVAFLCYRHYLHRNVTSMNFDNPVY
RKTTEDQFSLEKNRFPLPAATVGEEAQEPLTSPGTNDYV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggggtggagctatattcgcaggctcacggcagccgcctcgtccctgctcttcgtcctg
gctataacagcctcggtcaacctcgtccacgggttttccaccgaaagtgcgggcgcatgt
ccgctgcgacaataccgctgcgacaacgcgaaatgcataccagttacgtgggtctgcgat
ggagataacgattgcgaggacaattccgacgaacgtacggaggaatgcaaatctaccaag
gcttgcaccgacgcggagttcagatgtaccaatggccgatgtattctcaaaaactggcaa
tgcgatggcgagaacgactgtcccgatggatccgacgaaaaccccagcatctgccggatt
cgacggtgctccgaaagggagttcgagtgcagtcctggagtctgtataactaatgtctgg
gtctgtgataaccatgaagactgtgctgatgggtcagatgagaaaaattgtcgaagaagc
aagaattgcactgctgaacaattcacgtgtcgcggaagcatcggacagtgtgtaccattg
acctggatgtgcgatgatcacccggattgtatggatcgttcggacgagactgactgcaat
aatacctgtcgtgccgatgaattcacctgtgacaacaaacactgtattcagcggcactgg
gtctgtgatcatgacgatgactgtggagacggaagtgatgaaaaagactgccaaccatca
acgtgtcaacctgatacacagttcacctgtgcaaaaggttactgcatcacatcacggtgg
cgatgcgatggagattcagattgtcctgatggttctgacgaaatgggatgcacagataga
ccagctaaagacaaaatgaaccattgtggagttcacgaattctcgtgtgatgaccacatc
acttgtatacgtcagagttgggtttgcgatggcggtagagattgtcccgatggcgctgat
gaatctcccagtaattgtggatcagtcacttgcagaccagaccagtttcagtgctcagat
cgaagctgcatttcagggcgtttcttctgcgatggaataaaaaactgtccggatggtgct
gatgaaaaaaactgtacagcggcagacgttgtttgtgacccgttgaaacagttcgattgt
ggtcatggctcgtgtataccactcagcagtttgtgcgacggaaaacctgattgtctggga
tgggaagatgagccgctagatctatgtaaaaaaaatgaatgccttgttaacaacggtggc
tgttcacagatatgtgttgaccttccaattggtttccgctgcgaatgtagaaatggctac
agattaataaacaatcaaacttgtgatgatgtcgacgaatgtctggagcccggaagttgt
tcgcagttctgtaaaaatgaaaagggtacctttaaatgcagttgtgatgctggttatctc
agagatccgcgagacttgactcgctgcaaagcagctgagggccatgcaagtttattattt
gctagacgtcacgacattcgaaaagtagcactcgaccgtccagagatgacagcaattgta
aacaacaccaaaatggccacagctctggatttcgtctttcgaactggtatgatattctgg
agcgatgtcagtgataagaaaatatataaagctcctattgacgagggtaatgaacgaact
gttgtcattgatcgtgatctaaccacatcagatggtcttgctgtagattggatttataat
cacatatactggacggatgctgaaaaaaatacaattgaactggcaaattttgaaggtaac
atgagaaaaactctgataaaagatcgcgtacaagaaccaagagcaattgctgtcaatcca
ctggagggttggatgttctggacagactggggtgacgatgctagaattgaaagagctggg
atggatggctcacaccgttcgatcatcgtaggaaccgaagtgagatggccaaacggctta
acgttggatttagttggaaagaaattatattgggtagatgcaaaattgaacaaaattgct
tcttgcaactacgacggatctgggagacggactgtattatactcgcctgatattctcagg
catccgttcagcattacaacgtttgaagattacattttctggacagattgggataaagaa
gctatttttaaagcaaacaaattcaccggcaaagaagttgaggcgataacttctgtgagg
tctgttcaacacccaatggctgtacacgtgtatcatccatataggcaacctgatggaaaa
aatcagtgtcaggcagtaaatgggcactgtagtcacctttgcttaccagcaccaaaaatc
agtgcaaaatcccctcttctcagttgtgcttgtccagacgggctcaggcttttacccgat
ggtctcatgtgtgtcgagaatgtaacaacaacagtcgcaccaaccacccaagctgtcacc
gtgccattcaagaggtttgaacctcccaaggtcacaggttcaagtagaccaacaaatggg
acagatggcaacggaggagctggcttttccgaagaaaacacagatcgtggaatagtggct
ggaattgtaataggagtggtaacagttggccttgctctactggctcttgtagcctttttg
tgctacaggcattacctacatcgcaatgtcacaagcatgaactttgacaatcccgtgtac
agaaaaacaactgaagatcaatttagtttggaaaaaaaccgtttcccacttcctgctgca
acggttggtgaagaggctcaggaaccattaacaagtcccggaaccaatgattatgtttaa
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