Neodiprion virginianus: 124301985
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Entry
124301985 CDS
T09046
Name
(RefSeq) calcium-activated potassium channel slowpoke isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvg04040
]
124301985
Ion channels [BR:
nvg04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
124301985
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
124301985
NCBI-ProteinID:
XP_046613619
LinkDB
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Position
4:complement(3700788..3815693)
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AA seq
1161 aa
AA seq
DB search
MTCDVTTESPPVDDCLKVRKWWCFLLSSIFTFLAGLLIVLLWRAFAFLCCRKEPEFAPND
PKQKEQKAARQGKEFEGTFMTEAKDWAGELISGQTTTGRILVVLVFILSIASLIIYFIDA
SNCSEKVERCQKWSNNITQQIDLAFNIFFMVYFFIRFIAASDKLWFMLEMYSFVDYFTIP
PSFVSIYLDRTWIGLRFLRALRLMTVPDILQYLNILKTSSSIRLAQLVSIFISVWLTAAG
IIHLLENSGDPFEFTNPQHLSYWTCVYFLIVTMSTVGYGDVFCQTVLGRTFLVFFLLVGL
AIFASCIPEIIDLIGTRNKYGGTLKNERGRRHIVVCGHITYESVSHFLKDFLHEDREDVD
VEVVFLHRKPPDLELEGLFKRHFTTVEFFQGTIMNPIDLQRVKVHEADACLVLANKYCQD
PDAEDAANIMRVISIKNYSDDIRVIIQLMQYHNKAYLLNIPSWDWKQGDDVICLAELKLG
FIAQSCLAPGFSTMMANLFAMRSFKTKWLVDWNQSPDMQAWQNDYLRGTGMEMYTETLSP
TFIGMPFAKATELCFTKLKLLLLAIEIKGDAGNDSKISINPRGAKIAANTQGFFIAQSAD
EVKRAWFYCKACHDDIKDETLIKKCKCKNLATFRKGVRAVQMVGRASEDFSYANDHHPPP
TFTPPELPKMVHVRGEISRERDDLNAMRNHRNSVGMTLMNSTKQVNKVKPNVNRTPNDSL
SSPNQSYNNQRSQEESAYSGYHLAYEVKKLMPTSRGSGGNNVNNNGGLQVGIADDQAKDF
DFEKTEMKYDSTGMFHWSPARNLEDCILDRNQAAMTVLNGHVVVCLFADPDSPLIGLRNL
VMPLRASNFHYHELKHVVIVGAVDYIRREWKMLQNLPKISVLNGSPLSRADLRAVNVNLC
DMCCILSAKVPSNDDPTLADKEAILASLNIKAMTFDDTIGVLSQVGSPIVLQRRGSVYGA
NVPMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSTTYFNQNAL
TLIRSLITGGATPELELILAEGAGLRGGYSTADSLSNRDRCRVGQISLYDGPLAQYGEGG
KYGDLFVAALKSYGMLCIGLYRYRFRDTSSSCDASSKRYVITNPPDDFTLLPTDQVFVLM
QFDPGLEYRPSRGARGKDDAS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcgacgtgaccacggagtcgcctccggtagacgactgcctcaaggtacggaaa
tggtggtgcttcctattatcaagcatattcaccttcctggcggggctcctcatcgtctta
ctctggcgggccttcgctttcctctgctgtcgaaaggagcccgaattcgctccaaatgac
ccaaagcagaaggagcagaaggccgcccgccaggggaaggagttcgagggcaccttcatg
accgaggcgaaggactgggccggcgaactgatatccgggcagacgacgacgggacgcatt
ctcgtggtccttgtcttcatacttagtatagcatcgctcataatatacttcatcgacgct
tccaattgcagcgagaaggtggaacggtgccagaagtggagtaacaacattactcagcag
atagacttagctttcaatatattttttatggtctacttttttatacgctttatcgccgcc
agtgacaagctgtggttcatgctagagatgtactcgttcgtcgactactttacgatacca
ccgtctttcgtctcgatttatctcgaccggacgtggataggactgaggttccttcgagcc
cttcgactgatgaccgttcccgacatcctacagtacctaaacatattaaagacgtcgagc
tccattcgtctcgcccagctcgtgtcgattttcatctccgtatggctaactgccgccgga
atcattcacctgcttgaaaattctggagatccgttcgagttcacgaatccacagcacctg
tcttattggacctgcgtttacttcttgatcgttactatgtcgacggttggatacggcgac
gttttctgccagaccgttctcgggcgtacattcctagtgttttttctactcgtcggtctg
gccatattcgccagttgtattcccgagataattgacctgatcgggacgcgaaacaagtac
ggcggcacattgaagaacgagcgaggtcgcagacacattgttgtttgcggtcacatcacg
tacgagtcagtgtcccacttcctcaaggactttcttcacgaggatcgcgaggacgtcgac
gttgaggttgtctttttgcacaggaaaccgccggacctagagctggagggactgttcaaa
cgacacttcaccaccgtcgagttctttcaggggaccatcatgaaccccattgaccttcaa
cgggtcaaggttcacgaggcggacgcttgtctggtacttgctaacaagtactgccaggat
ccggacgccgaagacgcggcaaacataatgcgcgtcatctctatcaagaattattccgac
gacatacgcgtcattattcagctaatgcaataccacaacaaggcctatttactcaacatt
ccatcatgggattggaagcagggtgacgacgttatctgcctggccgaactgaagttgggt
ttcattgctcaatcctgcctagcaccaggtttcagcactatgatggccaacctcttcgcc
atgcgctcctttaagacgaaatggttggttgattggaaccagtcgcctgatatgcaggca
tggcagaatgactaccttcgcggaacgggaatggagatgtacaccgagacactgagccca
accttcattggaatgccatttgccaaggccactgagttgtgcttcacgaaattgaagcta
ttgctgctggcaatcgagataaagggggacgccgggaacgatagcaagatttcgatcaat
ccgcgtggggcaaagatcgcggcgaacactcagggattttttattgctcaatcagccgac
gaggtgaagcgagcgtggttttactgcaaggcttgccacgacgacatcaaagacgagact
ttgatcaagaaatgcaaatgcaaaaacttggccacattccggaagggcgtgagggctgtt
cagatggtcggacgagcaagcgaggacttctcgtatgcaaacgaccaccatcctcccccc
acattcactccgccagaactacccaagatggttcacgtgcgaggtgagataagccgagaa
cgagacgatctaaacgcgatgagaaatcatcgaaattcggtcggcatgacgctgatgaac
tcgacgaagcaagtgaacaaggtgaaaccgaacgtgaacagaacgccgaacgatagtttg
tccagtcctaaccagtcgtacaacaaccagagatcgcaagaggaatctgcatactctggt
taccatctcgcctacgaagtcaaaaaactcatgccgacgagccggggctcgggcggtaac
aacgtgaacaacaacgggggtctccaggtcgggatagccgacgaccaggcgaaggacttc
gactttgagaagacggagatgaagtacgactcgaccggaatgttccactggagcccggcg
cgaaacctcgaagactgtatcctggaccggaaccaggcggcgatgacggtgctgaacggg
cacgtagtcgtctgcctcttcgccgatccggactcgcccctgatcggactgagaaaccta
gtaatgccactgagagcttccaattttcactaccacgagcttaaacatgtagttatagtc
ggtgccgttgactatatacggcgggagtggaagatgctgcagaatctccccaagatatcg
gttctgaacggttcgccgctcagcagagcggatctcagggccgtgaatgtcaacctttgc
gacatgtgctgcattctgtcggctaaagtgcctagcaacgatgaccccaccctcgccgac
aaggaggccatcctcgcgtccctcaacatcaaggccatgaccttcgacgacactatcggc
gtactgagtcaagttggcagtccgatagttctacaaagaagaggatccgtctacggcgcc
aacgtgccgatgatcaccgaattggtgaacgacagcaacgtccagtttctcgaccaggac
gacgacgacgatccggacactgaactttacctgacgcagcccttcgcctgcggcacagcc
ttcgcagtcagcgttttggattccctcatgtcaacgacgtacttcaatcagaacgcgttg
acgttgattcgatccctcatcaccggaggggcgactcccgagttggaactgatccttgcc
gaaggtgctgggctcagaggaggatacagcacggcggacagtctttcgaatcgggaccgg
tgcagggtgggtcaaatatctttgtacgacgggccgttggctcagtacggcgaaggtggc
aagtacggcgacctctttgtcgcggcattaaaatcgtatggaatgctgtgcattggtctg
tacaggtacaggtttcgcgacacgagttcatcctgcgacgcatcttcgaaacgatacgtc
atcaccaatccacctgacgactttactctgttaccaacagatcaggtattcgttctaatg
cagttcgacccgggtctggagtacagaccgagcagaggagcccgagggaaagatgacgcc
tcctga
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