KEGG   Neodiprion virginianus: 124302113
Entry
124302113         CDS       T09046                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
nvg  Neodiprion virginianus
Pathway
nvg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124302113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvg03019]
    124302113
Messenger RNA biogenesis [BR:nvg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     124302113
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 124302113
NCBI-ProteinID: XP_046613866
LinkDB
Position
4:36390789..36394971
AA seq 908 aa
MSTDTSIEPGHKSRNDSEPQDESANAQGVEVIEILPGFTNFDDFVNVGFEALKTGIKAAN
GLPSGEKYDYYKCFPTFRNIINEEINNVLVCMQNITEGVGVRGNIRRRDIEEKFELLIEA
NDILLERAGICMDEASGILRNPDVEFVVSQSNSTAVSGSWNNLSFHSKTQQTQPANKAQA
ICLLTAKNIQRPQLKFDDKIDNSIKPWQPRIKDKPNSLKPLALYVEEDEDGEFFSHPYEF
ELDRFEAPEHQLESRVPVEYKHIDDTSLIVIEKPEDIKILLDDLSKYTEIAVDLEHHSYR
SFQGITCLMQISTKDTDYLVDTLSLRSELHQLNEIFTKPSILKVFHGAGSDIEWLQRDLS
LYIVNMFDTHIAAKQLNFPYLSLAHLMKRYCDIDPNKHFQLADWRVRPLPEELMKYARED
THYLLYIKDNLMNALLEQANGQSNILKAVYDRSTDVCKKIYRKPVWSEEKCMNLYRKSKK
MFNNRQLYALRELHKWRDATGRAEDDSTGYVLPNHMLLNIAESLPREMQGILACCNPIPP
LVRQNALSLHKIILKAKEQPMVKPILEDDIRQRMTQRNQVTDLETTLLYSPHDMPHDMEI
RADLPCLLDLNSSSEINVTEQTIPHTVTVFDSPPQSEDENTTGHITRKKRRTPFISPFER
YKRVVPMVAAEEAKERERQEKEEAERIKLVENSGNEIAESKNRVYKHFKDVVGAVTNPVS
VQQSAGSSSNQSIDSKQFGPDHKTLSQMQGRKRKRQSNYHDDTKLTESQDDLSTPLPFLH
KKFTQNYRRDKRELNSPTQGVKKQKKSYHDTGHSSFTEDTELSANNALSVKSLRNNKKKS
KQENKRNMKEKGILPRESFDYKNVDFSSFQGGSRAHNQIPFQAQNKKKNARGNRGKGNRG
NKKQKWNC
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgagcaccgacacgagtattgagcctggtcacaaatctcgtaatgattccgaaccacag
gatgaatccgcaaatgctcagggtgtggaggtcatcgaaatcctaccaggattcacaaat
tttgatgatttcgttaatgttggatttgaagcactaaaaaccggcataaaggccgctaac
ggcttacccagtggtgaaaaatatgactactacaaatgttttccaacctttcgtaatatc
attaatgaggagatcaacaacgttttggtctgtatgcaaaacattacagaaggtgtggga
gtgagaggcaatatcagacggcgtgacatagaagagaagtttgagcttttgattgaagct
aatgatattttattagagcgagcaggaatatgcatggatgaggcctcaggaattctgcga
aacccagatgtcgaatttgttgtatcgcaaagcaactcgacagctgtaagcggcagctgg
aacaatctgtccttccattcaaaaactcagcaaactcaaccggcaaataaggctcaagcg
atttgtttactgacggcaaagaatatccagcgaccgcagttgaagtttgatgataaaatt
gataacagcattaaaccttggcaacctagaataaaggataaaccaaactcgttgaagcca
ctcgctctgtatgtcgaagaagatgaagatggagaatttttcagccatccatacgaattt
gaacttgataggtttgaagcacctgagcatcaactggagtctcgtgttcctgttgaatat
aaacatatagacgacacttctttaatcgtgattgaaaaacctgaagatataaaaatacta
ttggatgatttgagtaaatacactgagattgcagttgacttggagcatcattcttataga
tcattccaaggcataacatgtctaatgcaaatatcaaccaaagatacggactatcttgtc
gacacattatcacttagatctgagctgcaccagctcaatgagatatttacgaaaccgtcc
attcttaaggtatttcacggcgctggcagtgacatcgagtggctgcaaagagatttgtct
ttgtacattgtaaatatgtttgatactcatattgcggccaaacagcttaatttcccatac
ctaagtttggcacatcttatgaagcggtactgtgatattgatccgaacaaacatttccaa
ctggccgattggcgagtcaggcctctacctgaggagctgatgaaatatgcaagggaagat
actcactacttgttgtatattaaagataatcttatgaatgcattgctggaacaggccaat
ggccaaagcaatatcttgaaggcagtgtatgatcgaagtacagacgtatgcaaaaagata
tacagaaaaccagtctggtcggaggaaaagtgtatgaatctgtatcgaaagagcaagaaa
atgttcaacaataggcaattgtacgctcttagagaactgcataagtggcgcgatgctact
ggcagggcagaggacgacagtactggttacgttctaccaaatcacatgctgttgaatatc
gctgagagtttaccccgtgaaatgcagggaattctggcatgttgtaaccccataccccct
ctggtcagacaaaacgcattatcgcttcataaaataatcttgaaagcaaaggaacaacca
atggtcaaacctatcctagaagatgatatccgacaacgtatgacgcagcgaaatcaagtt
acagatttagaaactacacttctatattcacctcatgatatgccacatgatatggagatc
agagccgatttaccttgtttgttggacctaaacagctcttcagaaattaatgttaccgaa
caaacgattcctcatactgtcactgtatttgacagccccccacaatcggaggatgaaaac
actacggggcacattacgagaaaaaaaagacgaacgccattcatcagtccttttgaacgg
tataagcgtgtagtacccatggtagctgcagaagaggcgaaagaaagagagagacaagaa
aaagaagaagctgaaagaataaaattggtagaaaatagtggaaacgaaatagcagagagt
aaaaacagagtttataaacacttcaaagatgtggttggagcagttactaatccagtcagc
gtacagcaatccgctggtagcagttcgaatcagtctattgattctaaacagtttgggcct
gaccacaaaactttgagccagatgcagggaagaaaacgtaaacgacaatctaattatcat
gatgatactaaactgacagagtcgcaagatgatttatcgacaccgctacctttcctgcat
aaaaaattcactcaaaattatagacgagataaacgagagttgaattcacccacacagggt
gtaaagaaacaaaagaaatcataccacgatacagggcacagttctttcactgaagatacg
gaactttctgcaaataatgcattgtctgtcaaatcactcagaaacaataagaagaagagt
aaacaggaaaataagagaaatatgaaagagaaaggtattctacctagagaatcatttgat
tacaaaaatgtcgatttcagtagttttcaaggaggcagccgcgcgcacaatcagattcct
ttccaagctcagaacaagaaaaagaatgcacgaggaaatcgagggaaaggaaatagaggt
aataagaagcaaaaatggaactgctaa

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