Neodiprion virginianus: 124302398
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Entry
124302398 CDS
T09046
Name
(RefSeq) DNA polymerase theta
Organism
nvg
Neodiprion virginianus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
POLQ_helical
DEAD
HTH_61
Helicase_C
ResIII
Helicase_dom4_arc
IstB_IS21
nSTAND3
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
124302398
NCBI-ProteinID:
XP_046614510
LinkDB
All DBs
Position
1:complement(5050900..5062557)
Genome browser
AA seq
2402 aa
AA seq
DB search
MSGTTIGSFGEQTLDALLEAECCSNTKNNTVNKKGADNLRNCKPFFIRLQEIKENLTDSR
LKNNHPPCKNYSAKLVTNDDTNIEKYFQESILLSKTDTSGLPSKIICGNDNVKSKKNNEI
DLIEDASGNNKFLYDQKGQSSRKESVGVSLSKQDLVKLSEEFLIVESSADEKSNNNSRAV
TNVRGLRKKCISNNTALNDVNFIHSSSNDKIVNNNLVNMVNKKTQDVQIEKRTQSGQLND
LLQVCAQPVNNDLNSIPESVSEYSIVNTQYRCKLSAWGLPPDILQKYELRGMTKMFPWQV
ECLSNYRVLEENKNLVYSAPTSAGKTFVAEMLVIKTVLERQKKVIFILPFVSVVREKMFY
FQDLLSSSGIRVEGFMGGIAPAGGLAAAHIAIATIEKANSLINRLMEEGDLSSLGAVVVD
ELHLLGDPHRGYLLELLLTKLKYMTLREEHVKIQLIGMSATLPNLSVLAEWLDAELFSTE
FRPVPLNEQYKVRTTIYDNKFVPVRELDPSPELPNDSDNILQLCIETISDGHSTLIFCPT
KNWCEKLAHQVAAIFFKLGSEETTLGKILRNQLDSNAIEETLSQLKRCPAGLDDILKSTV
SFGVAFHHAGLTMDERDIIECSFRTGSLRVLIATSTLSSGVNLPARRVIIRSLMFHGKVI
DTLTYRQMIGRAGRMGKDTAGESILICKPNEKKAAESLLSAPLDPVESCLEGSGPLIRAL
LEAVASEVACTPVDINLYGRCMLASFNPENNVGTHTKEAMDYLTTHEFITVQETKEKEQR
WVATALGKACLASSVSPGEGLFLFEELQRARKCFVLETELHIIYLVTPFNSGSLTSQIDW
MIFFNLWKSLSECERRVGQMVGIEERFVMSAIRGIAKHGKQQNIHRRFFTALALHDLVRE
MPLTTVSEKYGCSRGVLQSLQQSASTFAGMVTQFCKQLGWDCMELLFCQFQARLQFGVCR
ELLDLLRLPMLNGLRARSLYKEGIKCVADLATADELCVERALHKALPFESEKEQDGEHVL
DAAKRNKVRSIFVTGRDGLTPYQAAVLLVQEARTLVQHELGVTEVHWKQDNVTSRNKLGT
ILDDKSNASAIQDHYINQINNQIAMTIPAPIRTASSIANDATSQDCTENSKTIKDVWKSD
NDSVDAIQQTENCETGNVVSTVISDLHSHRIEYREIKMDGSKITHHIRNEEIDLRNKLQG
ETMQTELNNHKITRGEKHVNEIVKNKPKFSLLGAKRKIRAKDSVTSISSDNFQQIISETA
TFGSPKSLKTPDNERSKSKILNNGPDDTKTNITERNLQENCENICNKISEKSSPSKMVLP
DFKLSISPVVTLEWSSFNEKMSSKQSSEELGKSLRPESFSEQGKKDLRLNDEKKVSLSRS
PSLFGDSLYLDSQFCNELEKNVYGSLDITKVKGTECSAIDSPSISLQKPIAAIETKGKTP
EIIVKQTSSSEDKFSSNTNAMQNRAVTENPDLNNHIFNSEEINFSWNSTTWDHLKESNNA
SNLDSGKKKLNLQMTSNDFDISDEIAATPMMQNTRLKSISIKSNTQNVRNLKLIDNSGTR
KRKFNETHSLSDSSPVLNVLNLSHNRRLSFGSNKSDSDDLIAASQNLESIKNTTKSRTRI
KLESSKRIMINKKQHNSTLTKCNEQSNAVKTKNIELIRTGNASAKKVLYQENCSTDSVVS
NSEEDSPIQRMRATQNLHKRTVNSSFIVQKIENLRKCKKRCLRSDVREEQLNSEQTVNWN
VLDIINVTLNDNIFKLFSNELKQKTEIAIALAHNKFVNDTIGIGSKLVSGSASRMKNKFK
KNESCVYLDTVVNGVAISWGRNVIYWISFENRKEGSITLKDRLQLLRDVFTDSSVNVRCY
GSKEVYKKLHQCCKITPNCRFLDPKVAEWLLQPETDESNICDMAKMYFPQGATILQHASS
LKSSAGTSSGNDDYFFDRHKAAAVATVTWHVTSKLIEELHKQSQTLLNTFEDVETKVVST
LARMELTGIGLNLESLQELSAVLQEEMSSLEQRAYSLAGRKFSFTSSKEVAQVLGMYKGV
KVSTNKAVLENCDNPISKQIMSWRKLNTTQTKMVFPLLNLAQQGPRVRGCCLTRTATGRI
SMHEPNLQNVPRDFNSENNSYVISMRMAFVPTCGNIMLSADYCQLELRILAHLSKDPVLC
EIMKKDSDIFKNIAAQWNYITIDEVDDDMRQRTKQLCYGIIYGMGSRALAKQLSVTELEA
SRFMESFMGTYPNVNNWLNRVITESRENGYVTTLMERRRLLPSLNSEIKSERSQAERQAV
NTKIQGSAADLAKKAMVLIDERLQKEYSGTSRVISEMKTRKLRSSKDSQNRGAYLVLQLH
DELLYEVNAADLDRVAAIVKISMEEAYQLTIPLPVKIKVGPTWGSLTEYTVQKPIESSEC
IF
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaacgacaataggctcatttggggagcagaccttggatgcattattagaagcc
gaatgttgcagcaatacaaagaataataccgtaaataagaaaggagcggataatttacgc
aactgtaaaccattttttattcgtcttcaagaaataaaagagaatttgactgatagtcgt
ttaaaaaacaatcatccgccttgcaaaaactactctgcaaaattggtgacaaatgatgat
accaatattgagaaatattttcaagaaagtatacttttatccaaaactgacacttcaggt
ttaccaagtaaaataatttgtggaaacgataatgttaagtcaaagaaaaataatgaaatt
gatttgattgaagacgcaagtggtaataataaatttttatacgaccagaaaggtcaaagt
tccagaaaagaatctgttggagtatctttatccaaacaagatcttgtcaagttatctgaa
gaatttctcatagtcgaaagttcagctgacgagaagtcaaacaataattcacgtgcagtt
accaacgtgagaggcttgcggaaaaaatgtatctcaaataacacagcattgaatgacgtt
aattttatacattcatcatccaatgacaaaattgtaaataataatctagtaaacatggtc
aacaagaagacccaagatgtgcagattgaaaaaagaactcaaagtgggcaactcaatgac
ttgttacaagtatgtgcacaaccagtaaataatgatttaaattcgatacctgagtcagtc
agcgaatactccatagttaacacacagtatcgttgcaaattatctgcatggggattgcca
ccagatattctccagaaatatgaattgagaggcatgacaaagatgtttccctggcaagtg
gaatgtttatccaattaccgagtgctcgaggaaaacaagaacttagtttattccgcacca
acatcagcagggaagacttttgttgcagaaatgcttgtcataaaaacggtcttagaacgg
caaaagaaagtaattttcatcctaccatttgtctcagtggttcgagagaaaatgttttac
tttcaagatttgctatcgagcagtggaattcgagttgaaggtttcatgggaggtattgct
ccagcaggagggctggctgctgcccatatagcaatagcaaccattgaaaaagcaaattcg
ttaattaaccgattaatggaagaaggagatctttcatctttaggagccgtagttgttgac
gaacttcatctacttggagatccacatcgcgggtacttgctcgaattgctgctaacaaaa
ctgaaatacatgactctaagggaagagcatgtgaaaatccaactcattggtatgtcagct
acacttccgaatctctcggttttagctgaatggttggatgcagagcttttcagcacagaa
ttcagacctgttcctctgaatgagcaatacaaggtacgcacaactatatatgacaataaa
ttcgtacctgtaagagagttagatccttcacctgaactaccaaacgattcggacaatatt
cttcaactttgcattgaaaccatatcggatggacacagtacattgatattttgtcctacc
aaaaactggtgtgagaaactagcccatcaagttgctgcaatattcttcaagttaggtagc
gaagaaacaaccctggggaaaattcttaggaaccaattagattcgaatgcaatagaggaa
acactatcacaactgaaaaggtgccctgctggtttggatgatatcttgaagagcacggtt
tcatttggtgtcgcatttcatcatgcaggtcttaccatggatgagcgcgacattattgaa
tgctctttcagaactggatcactcagagttctcatagccacgtcaactttgagtagtgga
gtcaatctaccagcccgaagagtaattatcagatcgctaatgtttcatgggaaagtaatc
gatactttaacatatagacagatgattggacgtgctggtcgaatgggaaaggacactgca
ggtgaaagcatattaatatgtaagccaaatgaaaaaaaagcagcagaaagtttattgtca
gcacctttagatccagtagaatcttgtttagaaggttcgggaccacttattagagcactt
ttagaagctgtggcaagtgaagttgcctgtacacctgtggatattaatctttatggcaga
tgcatgctggctagtttcaatcccgaaaataacgttggtactcatacaaaagaagctatg
gactacttaactacgcatgaatttattacagttcaagaaactaaagagaaagaacaacgg
tgggtggcaacagcacttggcaaagcctgtcttgcgtcatcagtttctcccggagaggga
ttatttttgtttgaagaattacaaagagcaagaaaatgtttcgttcttgaaacagaattg
cacattatatatctggtgactccatttaattctggtagtttaaccagtcaaatagattgg
atgatattttttaacttatggaaatctttgtccgaatgtgaacgcagagtcggacaaatg
gtaggaattgaagagcgtttcgtcatgtcagctattcgtggaattgctaagcatggaaaa
cagcaaaatatacacagaagattctttactgcattagccctacatgatttggtcagagag
atgccattgaccactgtgtcagaaaaatatgggtgcagtcgaggggttttgcaaagctta
caacaatccgcttcgacatttgctggaatggtgacacaattctgtaaacaactaggatgg
gattgcatggagttgttattttgtcagtttcaagcaagattacagtttggcgtttgcaga
gaattattggacttgcttcgtctcccaatgctcaatggtcttcgtgctagaagtctttac
aaagagggaattaagtgtgtcgcggatctagctactgctgacgaactctgtgttgaacgt
gctttacacaaagctttaccttttgaaagcgaaaaagaacaagatggtgaacacgtatta
gatgctgccaagagaaataaagtacgaagtatttttgttactggaagagatggtctaact
ccataccaagcagcagtcttgttggtgcaagaagcacgtactttagtgcagcatgaatta
ggtgtcacagaagtacactggaaacaagataatgtgacttcaagaaacaaacttggaaca
atattagacgataagagcaatgcatcggctattcaggatcattacattaatcaaataaac
aatcaaattgctatgactattccggcacctattagaacggcaagttcaatagcaaacgat
gctacttcacaggattgcacagagaatagtaaaactataaaagatgtatggaaatctgac
aatgattcagtggatgcaatacagcaaacggaaaattgcgaaactggcaatgtcgtgtcg
acggttatttctgacctacattcacatcgaatagaatacagggaaattaaaatggatggc
tcaaaaatcactcatcatatccgtaacgaagaaattgatttacgaaacaagttacagggg
gaaacaatgcagacggaacttaataatcataaaataacgcgaggagaaaagcatgtgaat
gaaatcgttaaaaataagcccaaattcagtcttctaggcgcgaaacgaaaaatacgagct
aaagatagcgtgacatcgatatccagtgataattttcaacagattataagtgaaacagcg
actttcggttccccaaaatctctcaaaacaccagataatgagcggagtaagagtaaaata
ttgaataatggtccagatgacacaaaaaccaacattactgaaagaaacttacaggaaaat
tgtgagaatatttgcaataaaatcagtgaaaagtccagtccttctaagatggttttgcca
gatttcaaattgagtatttcgccagtcgttaccttggagtggtcatcatttaatgaaaaa
atgtctagtaagcagtcaagtgaagaattaggaaaaagcctcagaccagaatcattctca
gagcaaggtaaaaaagacctcagactcaatgatgaaaagaaagtatcactttcacgaagt
cccagtttatttggagatagtttatatttggattcgcagttctgcaatgaacttgaaaaa
aatgtttatggatccttagatatcactaaagttaaaggcacagaatgttctgcaattgat
agtccgtccatcagtttacagaagcctattgctgcaatagaaactaaaggaaagacgcca
gagataattgtgaaacagaccagtagttctgaagacaaattttcatctaatacaaatgcc
atgcaaaatcgtgcagttactgaaaatccagacttgaataatcatattttcaacagtgaa
gaaattaacttctcatggaacagcactacatgggatcatttgaaggaatcgaataatgcc
tcaaatttagattctggaaaaaaaaaattaaatcttcaaatgacttctaatgattttgac
atcagtgatgaaatagcagcaacaccaatgatgcaaaatactcgcttgaaatccatttcc
ataaaatcgaacacacaaaatgtacgcaatttaaaacttatagacaattcgggaactcgc
aaacgtaagtttaacgagactcactctttgagtgatagtagtccagttctcaacgtattg
aatctcagtcataatcggagactatcctttggatcaaataagtcagattcagacgatcta
attgcagcatcacagaatttggaatctattaagaataccacaaaaagtagaaccagaata
aaactggaatcctcaaaaagaattatgattaataaaaagcagcacaattcaacacttaca
aagtgtaacgagcagtcaaatgccgtcaaaaccaagaacatcgagttgataagaaccggc
aatgctagcgctaaaaaagttttgtatcaagagaattgtagtacagatagtgttgtgtcg
aattcagaggaggattctcctatccaaagaatgcgagcaactcaaaacctgcacaaaaga
actgtgaattcgtcatttatcgttcagaagattgaaaacctacgaaaatgcaaaaaaagg
tgtttaaggtctgacgttagggaagaacaattaaattcagagcaaacagtgaattggaat
gtcttagacatcatcaacgtaactttgaatgacaatatattcaaattattcagtaacgaa
ttaaagcagaagactgagattgcgatagctttggctcacaataaatttgtaaatgataca
attggtattggaagtaaattagtttccgggtcggcaagcagaatgaaaaataagtttaag
aaaaatgaaagctgtgtttacttagacacagttgtcaacggagttgccatttcttggggc
agaaatgttatttattggatctcttttgaaaatagaaaagaaggaagtattacattaaaa
gaccgtctgcaactcttacgagacgtattcacagattcatcggtaaatgtacgctgctac
ggaagcaaggaagtatacaaaaaacttcatcaatgctgtaagattacccctaactgtaga
ttccttgatccaaaagtagcagaatggttactacaacctgagactgacgaaagcaacatt
tgcgacatggctaagatgtattttccgcaaggtgctactatcttacaacatgcaagttct
ttaaaaagctctgctggaaccagttccggaaatgatgattatttttttgatagacataag
gctgctgcagtggcaactgtcacatggcatgttacgagtaagcttattgaagagttacac
aagcagagtcaaacattgttaaatacatttgaagatgtggaaaccaaggtggtttcaaca
ctggctcgtatggaactaacaggaataggtctaaatcttgaatcacttcaagagctgtca
gccgttctccaggaagaaatgtcatcattggaacaaagagcatattcgttagctgggcga
aagtttagtttcacctcctctaaagaagtggcacaggttctcgggatgtacaagggagtt
aaagtcagcacaaataaagccgtactagaaaattgcgataatccaatatctaaacaaatt
atgtcttggcggaaacttaatacaacgcagacaaaaatggtatttccgttattaaacctg
gcacaacaaggtccacgagttcgagggtgttgtctaacacgtacagccactggccgtata
tcaatgcatgaaccaaatttacagaatgttccaagagattttaattctgaaaataatagt
tatgtaattagtatgcgaatggcatttgttcccacctgtggaaatatcatgttatcagca
gattattgtcaacttgagctgagaatattggcacatctttcaaaagatcccgtcttgtgt
gaaataatgaaaaaggattctgacattttcaagaacattgctgcgcagtggaactatata
accatagatgaggtagatgatgatatgcgtcaacgcacaaaacagctttgttatggaata
atttatggcatgggttcgagggctttggcaaagcaattatcagttactgaattagaagca
agcaggttcatggaaagttttatgggaacttatccaaacgtgaataattggcttaatcgg
gtgataaccgaaagccgagaaaatggatatgtaacgactctaatggaaaggcgcagatta
cttccgagtctaaatagtgagataaaaagtgaaagatctcaagcagagagacaagcagtg
aatacaaaaattcaaggttcagcagcggacttggctaaaaaagctatggttctaatagat
gaaagactgcagaaagagtattcaggtacatctagagtcatttcagaaatgaaaactaga
aaactaaggagcagcaaagattcgcagaatagaggggcctacttagttctgcaactacac
gacgaactcctatacgaggtgaatgcagcagatcttgatcgtgttgcagcaatagttaaa
atttcaatggaagaagcatatcagctaacaattccgttgcctgttaaaatcaaagttggt
ccgacgtggggcagtctaacagaatacactgttcagaagcccatagaatcatctgaatgt
attttttaa
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