Neodiprion virginianus: 124302415
Help
Entry
124302415 CDS
T09046
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
nvg
Neodiprion virginianus
Pathway
nvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124302415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124302415
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124302415
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
124302415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ssDNA_TraI_N
Motif
Other DBs
NCBI-GeneID:
124302415
NCBI-ProteinID:
XP_046614559
LinkDB
All DBs
Position
4:complement(20158931..20160698)
Genome browser
AA seq
198 aa
AA seq
DB search
MDEKNEPIVCVPGQRLCLSDKVNVPGPGTYEQHGYIYAKLAGVVNLVKDEHKSTVEVHGI
REQSIVPAPGDIVTAEVMVVNQRFCKCVIKCIGDVVLTRPYRGILRKEDVRATEKDKTEM
YKSFKPGDIILARVLPLTEVHTYQLSTAENELGVVIAHSEEGVSMVPVSWTEMQCPETLN
KELRKVAKVVPEHIVNEK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaaaaatgagccaatagtgtgtgttccaggtcagaggctctgtttgtcggac
aaagtaaacgttccaggaccgggaacttacgagcagcacggatatatttatgcaaaatta
gcaggagtggtgaacttggttaaagatgaacacaagagcacagtcgaggtgcacggcata
agagaacaaagcattgtcccagctcccggagacattgtaacagccgaggtaatggtcgtt
aatcaaaggttttgcaaatgcgttataaaatgcattggggatgtggttttgaccagacct
tacagaggcattttaagaaaagaagacgtcagggctacggaaaaagataagactgaaatg
tacaaatcttttaaaccaggagatattattctggctagagttttacctctcaccgaagtc
catacttatcagctttccactgccgagaacgaattgggagtcgttatcgctcacagcgaa
gagggtgtttctatggtacctgtaagttggacggaaatgcagtgcccggagaccctaaac
aaagaattgcgcaaagtagctaaagttgtaccggagcatatcgttaatgaaaaataa
DBGET
integrated database retrieval system
