KEGG   Neodiprion virginianus: 124302465
Entry
124302465         CDS       T09046                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
nvg  Neodiprion virginianus
Pathway
nvg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124302465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvg03019]
    124302465
Messenger RNA biogenesis [BR:nvg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     124302465
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 CSTF1_dimer WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_SCAP Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_DCAF4 WDR90_beta-prop_4th Ge1_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd Beta-prop_RSE1_2nd Beta-prop_WDR19_2nd Cytochrom_D1 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 124302465
NCBI-ProteinID: XP_046614644
LinkDB
Position
4:35551898..35554904
AA seq 435 aa
MKEPDLDPKNIIKSRESLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLI
GAAHEPDRTKKEVNNLPTFSNVDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNC
RAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEEV
TCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGT
NHPVVRLYDVNTAQCFVSSIPSHQHTAGITSIKYCLDGKTYASAGKDGSIKLWDGVSNRC
INTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHK
AQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCS
DDFRARFWFRRMPTH
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgaaggagccagatttggatccgaagaatattattaaaagcagagaatcgctctatcgg
cttatgatcagccaacttttctatgatggtcatcaaactctggcggttcaattgtcgaac
atgatacaagctgagccgccttgcccaccttcggatagattgttgcatttgatgttaatc
ggtgctgcgcatgagccagatcgtacaaaaaaagaagtaaataatctaccgactttttcc
aatgtcgataatactcttggtcctggtttagatttagagtttgaaacagaggctcagacg
caggcaccagaaccggcacaatatgaaacggcgtatgttacatcgcacaaaggaaattgt
agagcaggagcattttcggcggatggacagctaattgccacaggctccgtcgatgcctcg
ataaagattttagatgttgacagaatgttggccaaatctgcaccggacgaaatggcacct
ggtgatcaaactggggggcatccagtgatcagaacgctgtacgatcacttggaggaggtg
acttgcttagagtttcatcccagggagccaatacttgtttccgggagcagagacttctca
gtcaagctctttgacttcagtaaagcaagtgttaagaaagcttttcgtactataacagac
gccgaccagatcagatgcttgtcgtttcatccgactggtgattttcttgttgttggaaca
aatcatcctgtcgttagattgtacgatgtaaatacggcacagtgctttgtatctagtata
cccagccatcagcatacggcaggtataaccagcattaaatattgtctggacggtaagact
tacgcctctgctggtaaggatggaagtattaaattatgggatggtgtatccaatcggtgt
ataaatacttttgtcaaagcacacgacgggtacgaggtttgctccgtgacgtttacaaga
aatggaaagtatttactctcatctggaaaagattctttgattaaattgtgggaactgtca
acgagcagatgtttgattgcttacacaggtgctggtacaacaggaaaacaggagcacaaa
gctcaagcaatatttaatcatactgaagactatgtgatgtttccggatgaggctacaacc
tctctttgtgcttggaattcccgaaacgcttccagaaagcagcttttatcattgggtcac
aatggccctgtccgtttaattgtacattctccgactgctccggctttcttaacatgcagt
gatgactttagagcaaggttttggttcaggcgaatgcctacgcattga

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