Neodiprion virginianus: 124302743
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Entry
124302743 CDS
T09046
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvg03036
]
124302743
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nvg04812
]
124302743
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124302743
Cytoskeleton proteins [BR:
nvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124302743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Cnd1
HEAT_EF3_N
Vac14_Fab1_bd
Adaptin_N
SCD
HEAT_Maestro
UTP20
Ipi1_N
MMS19_N
CAS_CSE1
DUF3384
RICTOR_N
Sec6
DUF3014
Motif
Other DBs
NCBI-GeneID:
124302743
NCBI-ProteinID:
XP_046615175
LinkDB
All DBs
Position
4:15479877..15509475
Genome browser
AA seq
1498 aa
AA seq
DB search
MAGNPRDMDAFMPLLSTTDIKKKLNVGNLLITYLGDDDKSIECQDIGLFIDNLVPWLHNG
NPKVCQNGLDALTYLADRMGPDFKPYISTIMQPTIDRLGDSKDTTREKASLLLLKLTNRG
CLTAQQLLDKLHPTFTHKNAKLREEGLVLLTTLLDEYGADEMALSGVISNIVKLLSDPTE
KVRETALNTVAHVYRHVGERLRHDLQKKHNVPQAKWLLLIEKFDQIKAAGDLLPSAMSSK
AMKDEDETDRAIKSAPVKRSTSAVQKRGQFGPAKSVQSTPAPPGSTTSTTKRAPLKYSSS
AKSAAGQAGAIDEESFLNAFEDVPAVKLFSAKDLEEQMKSIKDVVGDDKKDWKQRNESMK
KLRGILIAGGANFDNFTECLKNVQRSFEAACMDLRSQVVKEAAITVAFLSYQLKNKFASF
GECVLPTLINLIPNSAKVMATSGAVAVRFILQHTHSPRYIPIITASMNSKSKDIRRASCE
FLHLILQCWATNVLQRHVAALQEAVKKGIADSDADARAAARKSYWAFQEHFPEQAEVLLK
SLDASYKRSLMSLSNSGSINSLVGRSTSISPRVPRPTLSAAGSTENLHHGQAGLHGPLRR
TPSLPRSYRQSGIPILQRPTDNHCRITPDARSTSAIDLQAAQRAKARMVYANMYRHKATL
HNDISNQRGKSARPAKSPDPQSAVASPERMARTRTRVAGVSQSQPNSRSGSPSSRLSYAT
YNREGGESLMARPRRLSGQGIRSTGNSREPSPQRFGMERSFGSKLRDRNLHMSPTDRPPT
RPVMAQKMLQQSREAESALADALTFDSIDSYTRTPRGKGDHSDDSETNSICSERSMDSFR
RPSESFSWSGSQQRLYRDLWDQSIPKDIKEIIENCGRKHWGDRKEGLLGLQHFLANGNTL
TATELRKITDIFAKMFMDSYTKVLSLFLDTLNDLIESHSEDLGDWLYVLCARLLNKLGTD
LLGSIQTKIHKTLDVVKEQFPGEQLLPTVLRFLTDPTQTPNSRVKVATLTFISQIADTAV
PSALNSSAASALARLLDWTNDMKSQDVRRHAQNAVIALYNLNTPQVTMILSDLPKPYQEA
ALTLVQNHLRRSSGSSNPVSPGTPPSRMPHSPARTRVETDIDMDDDHLNPEEVYKSLRRT
TAEIQNYGFERLEKATTSKDSGISNMADVEEKMEGLALSNSGRSSSVSSPTQRGRPVTNV
ALNGSSDTITGDAVLPQENNGYKTHEHQKNTVSSPDSTSRGPEVLDNLMKVLQENVGHEA
EKIASLQEFQAYVRDGDVPYLKDNFRKLLRSLLENLGSPHKQVQIEVLQVLTELLKCPEL
TESFSKFIELIVLKVLQAHKFDDPNSEASSGSSRALVKQLEVLRIAEKCAATIVTVLPPD
QIIKLIQMIISTEPYPKNMAGIKMLHKIVEHWGADAIMPHLSKIMPGLIKQAYDDRESTV
RKSAVFCMVAIHAAVGEEVLMPHLASLYGSKLKLLNIYIQRAQQANSQPASPRNNNKN
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaatccaagagacatggatgccttcatgccactcctgtctaccacggatatt
aaaaagaagttgaatgtcggtaacttgctgatcacgtatctcggcgacgatgataaaagc
atcgagtgccaggacattggactcttcatagacaatctcgtgccttggcttcacaacgga
aatccaaaggtttgtcaaaatggtttggacgctctcacttatcttgccgatcgtatgggc
ccggattttaagccttatatatcaacaatcatgcagcctacaatcgacagattgggagac
agcaaagacacaacgagagaaaaagcatcgcttcttctcctcaagctcacaaatcgaggc
tgtttaacggctcaacaacttttagataaactccatccaacattcactcacaaaaatgcc
aaattgagagaagaaggtctggttctcctgacaacgttgttagacgaatatggcgctgac
gaaatggcactatccggagttatttcaaacatagtcaaacttctgtccgatccgactgaa
aaagttcgggaaactgcgctcaacactgtggcacatgtttacagacacgttggcgaaaga
ttgcggcatgatctacaaaagaagcacaacgtgccacaggcaaagtggctgttactaatc
gagaagtttgatcaaataaaagctgcaggagatttattaccatcagcgatgtcgtcaaag
gcaatgaaagacgaagatgaaacagaccgagcgatcaaatccgctcctgtgaaaagatca
acaagcgccgtgcaaaagcgaggacagtttggacccgccaaatccgtgcaatcaactcca
gctccgcctggtagtacaacgtctacgacgaaaagggcacctctaaaatacagttcatcc
gcaaaatcagcggcaggccaagctggcgctatcgacgaagaatctttcctcaacgcgttt
gaggatgtaccggcagtgaagttattctccgcaaaagatttggaggaacaaatgaagagc
attaaggatgtagtaggtgacgataaaaaagattggaagcagagaaacgagagcatgaag
aaactgcgtggtatattgatagccggtggggctaatttcgacaatttcacagagtgcctg
aagaacgtccaaagatcgtttgaagcagcatgcatggatctgagatcgcaggttgtcaag
gaagcggctataacagttgccttcctgagctatcaactcaaaaataaatttgccagtttt
ggagaatgtgtattgccaacgcttatcaatctcatacccaacagcgccaaggtcatggcg
acttccggcgctgttgctgtacgattcattttgcagcacacccacagtcccagatacata
ccgataattacggccagtatgaacagcaaaagcaaagatatcagaagggcgtcttgcgag
tttcttcacctgatacttcagtgctgggctacgaatgtgcttcagagacatgtagccgct
ttacaagaagccgttaaaaaaggcatcgctgattcagacgccgatgccagagcagcggcg
agaaagtcttactgggcattccaagaacattttccggaacaggctgaggttttgctcaag
agcttggatgccagttataaaagatcgctcatgtctctgagtaacagtggcagtatcaac
agtctagttggcagatctaccagcatcagtccaagggttcctagaccgacactcagcgct
gcaggtagtacagaaaacttacaccatggtcaggcaggattgcatggccctctgagaagg
actccgtctttgcctagatcgtatcgtcagtctggaattcctattctacaaagacctact
gataatcattgccgcataacacctgacgccagatcgacaagtgcgatagatctacaagca
gctcaacgagccaaggcgagaatggtttacgcaaacatgtatcgtcataaagcaacgcta
cataatgatattagtaatcagcgaggaaaatcagctcgaccagccaaatctccggatccg
caaagtgctgtcgccagtccggaaagaatggcgagaactagaacaagggttgcaggagtg
tcgcaatctcaacccaacagcagatctggctcaccatcttcgagattgagctacgcgacg
tacaacagggaagggggagaatctcttatggcaagaccgagaagattgtccggacaggga
ataagaagtaccggaaacagcagagaaccgagtccacagcgttttggaatggaaagaagt
ttcggaagtaaattacgagatcgaaatcttcacatgtctcccaccgacaggcctccgact
aggccggttatggcgcaaaaaatgctccaacaatcacgagaagcggaatcagctcttgcc
gatgctctaacattcgacagtattgatagttacaccagaactccaagaggcaaaggggat
cacagcgacgacagcgaaaccaacagcatttgctcggagcgcagcatggacagttttcgg
cggccgagcgaatcgttttcatggagcggatcacaacaaagattgtatcgcgatttgtgg
gatcaatctatccctaaggatattaaagaaatcattgaaaattgtggtcgcaagcattgg
ggcgatcgtaaagaaggcctgcttggtcttcagcattttttagcaaatggaaatacgttg
acggcgacggaattgcgaaaaataacggatatctttgcgaaaatgtttatggactcctat
actaaagtgttgagtttattcctggatacgttgaacgatctgatcgagagtcacagcgaa
gatttaggcgattggttatacgtgttgtgcgcccggcttttgaataaacttggaacggat
ttgcttggctcgatacaaactaaaattcacaaaaccttggacgttgtaaaagaacaattc
ccaggagaacaactcttgcctacagtattacgcttcttgaccgaccctacgcagacacca
aattctcgggtcaaagtagccactctcactttcatatcgcagatcgccgacacagccgta
ccgtcggctttgaatagttccgcagcctcggctctagcgagattattggattggacaaac
gacatgaagagtcaggatgtcaggaggcacgctcaaaacgcagttatagcactttacaat
ttgaatacacctcaagtgacaatgatactctctgatttaccaaaaccttaccaagaagca
gcattgaccctggtccaaaatcacctcagaagatcatccggatctagtaatccagtttct
cccggcactccgccttcaagaatgcctcattccccagctcgaacaagagttgagactgat
atcgatatggatgacgaccatttaaaccccgaagaggtttacaaatcgttgaggcggaca
acggcagaaattcaaaattacggttttgagcgtcttgagaaagcgacgaccagcaaagat
agtggtatcagtaacatggcagacgtggaagagaaaatggaagggctggcattgtcgaat
tcaggacgctcgtcgtccgtttcttctcctacgcagcgaggcaggcccgtcacgaacgtg
gcattgaacggctcgagtgatacaatcaccggtgatgcagtgctgccgcaggaaaacaac
ggatacaagacacacgaacaccaaaaaaacacggtgtcttcaccagattcaacgagcaga
gggcctgaagtgttggacaacctcatgaaggtacttcaggaaaacgttggtcacgaagca
gagaaaatcgcatctctacaagagtttcaggcgtacgttagagacggtgatgtgccatac
ctaaaagataacttcaggaaactattgaggtcactgctggaaaatcttggcagtccccat
aaacaagtacaaatagaagtacttcaggttcttacagagctactcaagtgccctgaactg
acagagtcgttttcaaaattcatcgaactgatcgttctcaaggttttgcaagctcacaaa
ttcgacgaccccaattctgaagcttcctccggcagcagtcgagccctggtaaagcaatta
gaggtactcagaattgcggagaagtgcgcggcgacaattgtaaccgtactgccgccggat
cagataataaaactgattcaaatgataatatcgactgaaccgtatcctaagaatatggct
ggcattaaaatgcttcacaagatagtcgagcactggggcgcagacgccataatgcctcat
ttatcgaaaatcatgcctggcctgataaagcaggcttacgacgacagggaaagtaccgtg
cgcaaaagcgcggtcttttgcatggtcgcaattcatgccgcggtaggcgaagaagtcctg
atgcctcatctcgcctcgctatatggaagtaaattgaagctgttgaacatatacatacaa
cgcgcgcaacaggctaatagtcagccggcaagcccacgtaacaacaataaaaattaa
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integrated database retrieval system
