Neodiprion virginianus: 124303104
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Entry
124303104 CDS
T09046
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124303104
Enzymes [BR:
nvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124303104
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124303104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_19
Helicase_PWI
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124303104
NCBI-ProteinID:
XP_046615862
LinkDB
All DBs
Position
4:26117126..26130006
Genome browser
AA seq
2136 aa
AA seq
DB search
MRELPRLTRSLRAFTDLGRLKKLDNEKNNLIAKRLERAAKSNKGPTWSEICKFVDKNAVS
YLHQIHHEASSFCEGQTSELKDEAAIFILKLLINENNVSQKNLKILRQTFGSITLEKANT
IMQLIKAIRERISEASMEYILNSEEKENGLLDFPPHMFGLDIPFFPAKVTWPETKKLQDM
SAKNPIKITSKFTMAYNAETVSSNKTEFEKSRFTKGLKKCYEKYSAEMIYEDFGHMIVDK
LKCGGDNLQTELFDLLGYENIEFIEYVLEHQKSIVALFTIQKTQKNNTPILRPQVGCQVI
VQSEKEKQLMKQYRKEEKKLNKITNKLENGEDDDEETFDPVELRLKRQEALMRQAMQAPI
LNTTQRNIFPSGIRAERYPFVFDSKLTARAAAGFVSGQKVMLPENVERKDSQLCEEVHIP
VPPAAVLDVGNNPVIISSLDEVGQMAFHGIKSLNRIQSIVFDAAYHTNENLLICAPTGAG
KTNVAMLTVIHQIKLHIAQGVLKRDQFKIVYIAPMKALAAEMTSSFNKRLGCLGVSVREL
TGDMQLTKVEIQQTQMIVTTPEKWDVVTRKGTGDIALTSIVKLLIIDEVHLLHGDRGPVV
EALVARTLRQVESSQSMIRIVGLSATLPNYTDVAKFLRVNPHKGLFYFDHRFRPVPLGQT
FIGVKAVKPLQQMADMDLVCYNHVVDMVRKGHQVMVFVHARNATIRTATVLKEMALQNGT
QKLFMSDGNTGLAQKALAKSRNKHLGELFSYGFSVHHAGMLRTDRNLVEKYFADGLIKVL
VCTSTLAWGVNLPAHAVVIRGTEIYDSKHGTFIDLGILDVLQIFGRAGRPQFDTSGHGTI
ITTHNKLSHYLSLLTNQFPIESNFITYLADNLNAEITLGTISNVEEAVEWLSYTYLFVRM
RLNPQVYGINYQDVIEDPNLERKRKELIDTAAKALDKAKMIRYITRTGDLSVTDLGRTAS
HFYIKYDTVEIFNEHMKPIMTEADVLGMISRSQEFEQLKVRDDEMDELDNLTTDYCEVLV
QGGAENIHGKVNILLQTYLSRGRVNSFSLLSDQSYITQNAVRICRALFEMVLRKNNAIMA
GRLLGIAKMLELQQWDHMSPMRQFCCLPQDIITKIEDRHLTMEKLKDMDIKEIGNILRNQ
KMAGLIKKCCSEFPSLELEANLQPITRTVLRIRLKITPDFRWNDRVHGKSSEAFWIWIED
PDSNFIYHHEYFLVTRKMVYEKADQDLVMTIPLSEPLPTQYFVKAVSDRWLGCEMVLPLS
FQGLILPETHPPHTDLLELQPLPVTALKDPKFENLYKFSHFNPIQTQIFHCLYHTDNNVL
LGAPTGSGKTIAAEIAMFRVFKEYPGQKVVYIAPLKALVRERINDWKVRIEEKLGRTVVE
LTGDVSPDVRAIASASVIVTTPEKWDGISRSWQTRNYVQKVALIIIDEIHLLGEDRGPVL
EVIVSRTNFIASHTSKALRIVGLSTALANAVDLANWLGIEQMGLYNFRPSVRPVPLEVHI
SGFPGKHYCPRMATMNRPTFQAIRQHAPCSPSLVFVSSRRQTRLTALDLIAYLAAENDPK
QWLHMLDDEMDNILVNIKDTNLKLTLAFGIGLHHAGLQDRDRRTVEELFVNNKIQVLITT
ATLAWGVNFPAHLVVIKGTEYYDGKSKRYVDMPITDVLQMMGRAGRPQFDDSGVAVVLVH
DIKKNFYKKFLYEPFPVESSLLEVLPDHINAEIVAGTIKNKQEFLDYLTWTYFFRRLMKN
PRYYELEVLDPAEVNLYLSGLVEKTLSVLIDSYCIDYDEGEKCLSPLSMGRIASFYYLSH
QTMLLFNNNLKQNLTLEQLLRIACDAYEYNQLPVRHNEDLLNEELAKMCRHAVDSSTLDS
PNTKTFLLLQAHFSRLPLPCADYLTDLKSVLDQAIRILQAMIDIVADRGWLGAALRLMQV
LQMIIQARWIDESALLTLPHLEKEHLRLFSTLPKSLPMLCTVTHGNYSRLANALQEEFVD
SEIQQIHQVIKEMPVISVELTLQGWWADGSTEKKIPQPAGPHCWIDVHESSDYTLIVGMK
RKNHSHNLKAHCPKFPRGKDEGWFLILGDETETELLALKRASGIRGQRKCSQLFFSTPPC
IGRKKLTFYLMSDCYMGLDQQYDVHLNVIPSSSTDQ
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaactgcctcggctcacacgttcactgcgtgccttcacagacttaggacgatta
aagaaacttgacaatgagaagaataatcttattgccaaacgactagagagagctgcaaaa
tcgaacaaagggccaacctggtcagaaatatgcaaattcgtagacaaaaatgctgtttca
tatttacatcaaatacatcacgaagcttccagtttctgcgagggacagacttccgaacta
aaagacgaagctgcaatattcatattaaagcttttgattaatgaaaataacgtcagccag
aaaaatctcaagatcttacgacaaacattcggttcgattacactggaaaaagctaataca
ataatgcagttaataaaagcaatccgagagcgaatatcagaggcatcaatggaatacata
cttaattcggaagaaaaagagaatggtttactggattttccaccccacatgtttggtctt
gatattcccttttttccagcaaaagtcacttggcccgaaactaagaaactgcaagatatg
tctgcaaaaaatccaatcaaaattaccagcaaattcactatggcatataatgctgagact
gtttcatcaaataaaactgagtttgaaaagagtcgattcacaaaaggactgaaaaaatgt
tatgagaagtactcagcagaaatgatatacgaagattttgggcatatgatagtggataag
ttaaaatgtggcggtgataatcttcaaacagaactctttgatcttcttggctatgagaat
atagaattcattgaatacgttcttgagcatcagaaaagtatcgttgccttattcactatt
caaaagactcaaaaaaacaacacacctatactaaggccgcaagtaggatgtcaagtaatt
gttcagtctgagaaagaaaagcaactgatgaaacagtatcgcaaggaagagaaaaagcta
aataaaattacaaacaaattggaaaatggtgaagatgatgacgaggaaacttttgatcct
gttgagctacgtctaaaaagacaagaagcattgatgagacaagccatgcaagctccgatc
ctcaacacgactcaaagaaacatttttccgtctggtattcgagcagagaggtatccattc
gttttcgattcaaagcttactgcgagagctgctgcaggctttgtttctggacaaaaggtc
atgttaccagaaaatgttgagagaaaagattctcaattatgcgaggaagtacatatacca
gttcctccagccgcagttctggatgttggcaataatcctgtgataatatcttcattggat
gaggttggtcaaatggcgtttcatggtataaaatcattgaatagaatacaaagcatagtc
tttgacgctgcctatcatacaaacgaaaacttgttgatttgtgctccaactggagctggt
aaaactaatgttgcaatgttaactgtgatacatcagattaaactgcatattgcacaagga
gttttgaaaagagatcaatttaaaatagtatatatagcacctatgaaagctttggcagct
gaaatgacatccagtttcaataaaagattgggatgtttgggcgtttctgtgcgagaactc
actggtgatatgcagctaacaaaagttgagattcagcaaacacagatgattgttactacg
ccagaaaaatgggatgttgttacaaggaaaggaactggagatatagcgctcacaagtata
gttaagttactaattattgatgaagttcatttgcttcatggagatcgtggacctgttgtt
gaagcattggttgcccgtaccctcagacaggtcgaatcatctcaaagtatgatcagaata
gttggactctctgcaactctacccaattatacagatgtggcgaaattcctccgggtaaat
ccacacaagggtttgttttactttgatcatcgatttcgacctgtacctctcggccagact
tttataggtgtgaaggcagtgaaacctttacagcaaatggctgatatggaccttgtatgt
tacaatcacgttgtcgatatggttcgcaaaggtcatcaggtaatggtgtttgtacatgct
cgtaatgctacaatccgaacagcaacggttctcaaagaaatggcattacaaaatggcacg
caaaaattatttatgtccgatggtaacactggactcgcccaaaaagcattggcaaaatcc
cgaaacaagcatctcggagagttattttcctatgggttttctgtacatcatgctggaatg
ttacgtacagataggaatctggtggaaaaatattttgcagatggtttgataaaggttctt
gtgtgcacatcgacactagcttggggtgttaatttaccagcacatgccgttgttatacgt
ggtacagaaatatatgattcaaaacatgggacattcattgacctaggcattttagatgta
ttgcaaatatttggtcgcgctggtcgaccacaatttgatacatctggacatggtacaata
atcacaacccataacaaattgtcccattatctttcgttactgaccaaccaatttccgatt
gaaagtaactttattacctatttggcggacaatttgaatgctgagatcacactaggaacg
atatcgaatgtagaagaagcagtcgagtggctaagttacacatatttgtttgttcgaatg
agactcaaccctcaagtatatggaatcaattatcaggatgttattgaagatcccaacttg
gaacgaaaacgaaaggagttaattgacacagctgcaaaagcgttggataaagctaaaatg
attcgttacattactcgtactggagatctcagtgtaactgatttgggtagaacggcgagt
catttttatattaaatatgatactgtggaaatattcaacgaacatatgaagcccatcatg
actgaagctgacgtactgggaatgatatctaggtcacaagaatttgagcagcttaaagtc
agagatgatgagatggacgaattggacaatttaactacagactattgcgaggttttagta
caaggtggagcagagaatattcatggaaaagtgaatattttactgcaaacatacctgtca
cggggtcgtgtcaattctttttctttgttatcggatcagtcctacatcacacagaatgct
gttcgtatctgtcgagctttatttgagatggtattgcgaaagaacaatgcaattatggca
ggacgtttgctaggcatagcaaaaatgttggagttacaacagtgggaccatatgagcccc
atgcgccagttctgttgtttgcctcaagatattatcacaaaaattgaagatcgtcacctt
acaatggaaaaacttaaagatatggatattaaagaaattggaaatattttgagaaaccaa
aagatggcaggtttgattaaaaagtgttgcagtgaattcccttccctagaattagaggca
aacttgcaaccaatcacacgaacagttcttcgcattcgtttaaaaattactccagatttt
cgctggaatgatagagtgcatggaaaaagttcggaagccttttggatttggatagaagac
ccagacagtaattttatctatcatcatgaatactttttggtaacaaggaaaatggtttat
gagaaagcagatcaagatcttgtgatgacaattccactctcagaacctttgccaactcaa
tactttgtgaaggctgttagcgatcgttggttaggatgtgaaatggtactacctttatca
tttcaaggtctgatccttccagagactcacccaccacatactgatttattagaactacaa
ccactgccagtaactgcattgaaggatccgaagttcgaaaatttatataaattttcccac
ttcaatccaatccaaacgcagattttccactgcctttaccataccgataataatgttctt
ctgggagctccaacgggttcgggaaaaacaattgctgcggaaattgctatgttcagggta
ttcaaagaataccctggtcaaaaagtagtgtacatagctccactcaaagctttagtcagg
gaaagaatcaacgactggaaagtgagaatagaagaaaaattaggaagaactgttgtcgag
ttaacgggtgatgtttctccagatgtacgagcaatagctagcgcaagcgtaatcgtaaca
acccctgaaaagtgggacggaattagcagaagttggcagacaagaaattatgttcaaaaa
gtagcactcatcataatagatgaaatccaccttctgggtgaagacagaggtccggttctg
gaagtgattgtctcacgaacaaactttatcgcctctcatacttctaaagcattgagaatc
gttggcctttctacagcgttggctaatgctgttgacttggcaaattggcttggaattgaa
cagatgggactttataatttccgaccatcagttcggccagtgccattagaggttcacatt
agtggattcccaggcaagcactattgtccacgaatggcgacgatgaatcgtccaactttc
caagcgatcaggcagcatgctccctgcagcccttctcttgtttttgtgtcttctcgaagg
caaactcgtttaacagcattagatttgattgcttatcttgctgccgaaaatgatccaaaa
caatggttacatatgcttgacgatgaaatggacaatattctggtcaacatcaaagacact
aatttaaaattgaccttagcttttggaattggactccatcatgctggtctgcaggatagg
gatagaagaactgtagaagaactctttgtaaataacaaaatacaggtactaataacaact
gcgactttagcttggggagtaaactttcctgctcacttggttgtaataaaaggtactgaa
tattacgatggaaaatcaaaacgatacgttgacatgccaataacagatgtactacagatg
atgggtcgagctggtagacctcaatttgatgattctggggtagctgtagttcttgttcat
gacatcaagaagaacttctacaaaaaattcttgtacgagccatttccagtcgaatcaagc
ctactagaagtattaccagatcacattaatgccgagattgttgccggcacgataaagaat
aaacaagaattccttgactatttaacgtggacgtacttctttagaagattgatgaagaat
ccgaggtattacgaactcgaggtgttagatccagcagaagttaatttatatctttctggg
ctggttgagaagactctcagtgtattaatagattcgtattgtattgactatgatgagggt
gaaaaatgtttgtctcctctttcaatgggcaggatagcatcgttctattatctatcccat
cagacaatgttattgttcaacaataatttgaaacaaaatctgacactggaacaactcttg
cgaatcgcatgcgatgcctatgaatacaatcaattaccagtgcgacacaatgaagactta
ctaaacgaggaattggcaaaaatgtgtcgtcatgcggtggattcatcaactttagattct
ccaaatactaaaacatttctactactgcaagcacatttctccagattgcctttaccctgt
gcagactatctaactgatcttaaatctgttcttgaccaagctatcaggatactgcaggca
atgatagatattgtggccgaccggggttggcttggagcagcattgcgtctcatgcaagtg
cttcaaatgattattcaagcaagatggattgatgagtctgcgttgctaactttaccacat
ctggagaaggagcatttgcggttattctctacgttgccaaaatctttgcccatgttatgc
actgtcacccatggaaattacagccggctagcaaatgctctacaagaagaatttgttgac
agtgaaattcagcagatacatcaagttatcaaggaaatgccagtaatatccgtagaactg
acattacaaggctggtgggcggatggtagtacagagaagaaaatacctcagcctgctgga
cctcattgctggatagatgttcacgaaagcagtgattacacactaattgtgggcatgaaa
agaaagaatcactctcacaatctcaaagcacattgccctaagtttccaagaggaaaagat
gagggttggtttttgatattaggtgatgaaaccgaaacggagttattagctctaaagaga
gcatcgggtattagagggcagcgcaagtgtagtcagctatttttttccactccaccatgc
ataggtcgcaaaaaattgacgttttatctgatgtctgattgttacatggggctggatcaa
cagtacgacgtacatttgaatgtcattccatcgtcaagtactgatcaataa
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integrated database retrieval system
