Neodiprion virginianus: 124303276
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Entry
124303276 CDS
T09046
Name
(RefSeq) spectrin alpha chain isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
nvg
Neodiprion virginianus
Pathway
nvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124303276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nvg04812
]
124303276
Cytoskeleton proteins [BR:
nvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124303276
Intermediate filaments
Intermediate filament-binding proteins
124303276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
SH3_9
EF-hand_6
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
GvpG
Motif
Other DBs
NCBI-GeneID:
124303276
NCBI-ProteinID:
XP_046616265
LinkDB
All DBs
Position
4:15179837..15189227
Genome browser
AA seq
2433 aa
AA seq
DB search
MDQITPKEIKILENPADIQERRDQVLGRYANFKSEARLKRDKLEDSRRFQYFKRDADELE
GWIYEKLQAASDESYKDPTNLQAKIQKHQAFEAEVAAHSNAIVLLDNTGSEMIAQHHFSS
DVIRKRLEELHRLWELLLSRLADKGLKLQQALVLVQFLRHCDEVMFWIHDKEAFVTTDEF
GHDLEHVEVLQRKFDEFQKDMASQEYRVTEVNELADKLLLDGHPERDTILRRKEELNESW
QRLKQLAILRQEKLFGAHEIQRFNRDADETMAWIAEKDVVLSSDDFGRDLASVQTLQRKH
EGIERDLAALEDKVATLGAEADRLAAIHQADHSQQIQSKHAEILQLWESLTAKAKERRSK
LDESYYLHRFLTDYRDLVSWMNDMRAIISADELAKDVAGAEALLERHQEHKGEIDARKDS
FDSTARAGQQLLDRKHYAADEVARKLESLAEDKKSLLDLWEKRRILYEQCMDLQLFYRDT
EQADAWMAKQEAFLANEDLGDSLDSVEALIKKHDDFNKSLAAQDEKIKVLDDFARKLIEG
DHYAAEDVFQRRQLLLERRGALLDKSAQRRQRLADAYTLQQFERDCDETKGWVNEKLKFA
TDDSYLDPTNLNGKVQKHQNFEQELNANNTRMEEILSTGQKLIDEEHYASDRIRARLDEI
TGLWDSLVQATDKKGSKLQEAAQQQQFNRTVEDVELWLSEVEGQLMSEDYGKDLTSVQNL
QKKHALLEADVASHADRIEGIAQAAQQFVSSGHFDADNIKAKQDQLVGRYAALQRPMSIR
KQRLLDSLQVQQLFRDIEDEEAWIREKEPVAASTNRGRDLIGVQNLQKKHQAVLAEVNNH
EPRVAAVCQSGAKMRNDGHFAAEEISQRLAALDDHWGQLKEKARQRKTDLDDSLQAHQYF
ADANEAESWMKEKRPIVLNTDYGKDEDSSEALLKKHEALVSDLEAFASTIGALREQAAAC
RQQETPTIDIAGKECVVALYDYAEKSPREVSMKKGDTLTLLNSNNKDWWKVEVNDRQGFV
PAAYVKRVEPEASLSASQQNLAREQSSIAARQAQIQAQYDDLLYLAHERQNKLNETAKAY
VLVREAAELATWIKAKENHAQVQDVGEDLEQVEVMQKKFDDFQADLKANEVRLAEMNEIA
VQLMSLGQTEAALKIQTQIQDLNEKWTSLQTLTAERASQLGSAHEVQRFHRDVDETKDWI
REKDAALNNDDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDEIANRLMQSHPDTAEQ
TYAKQKEINEEWTQLTAKANSRKEKLLDSYDLQRFLSDYRDLMAWINSMMGLVASEELAG
DVTGAEALLERHQSHRAEIDARYGILPEEHRTEIDARAGTFQAFELFGQQLLQSSHYASV
EIQEKLEAMAEARQELEKAWIQRRMQLDQNLELQLFCRDCEQAENWMSAREAFLGSADAV
DSGDNVEALIKKHEDFDKAINAHEEKIAALQTLADQLIAAEHYAAKPIDERRRQVLDRWK
HLKDALIEKRSKLGESQTLQQFSRDADEMENWIAEKLQLATEENYKDPANIQSKHQKHQA
FEAELAANADRIQSVLAMGTNLIDKHQCAGSEDAVQARLASIADQWEYLTQKTTEKSLKL
KEANKQRTYIAAVKDLDFWLGEVESLLTSEDAGKDLASVQNLMKKHQLVEADIQAHEERI
KDMNGQADSLIESGQFDAAGIQEKRQSINERYERIRNLAAHRQARLNEANTLHQFFRDIA
DEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELGSHEPAIQAVQEAGEKLMDVS
NLGVPEIEQRLKLLNQAWAELKQLAATRGQKLDESLTYQQFLAKVEEEEAWITEKQQLLS
VEDYGDTMAAVQGLLKKHDAFETDFAAHGERCKDICDAGAALVDAGNHRADSISQRCSQL
RNKLDQLSALAARRKARLNDNSAYLQFMWKADVVESWIADKETHVRSEEFGRDLSTVQTL
LTKQETFDAGLHAFEHEGIQNIATLKDRLVDSAHEQTPSIQKRHADVIARWQKLLADSDA
RKQRLLRMQDQFRQIEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEIRALREAHA
QFQASLSSAEADFQALAALDRQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDVELA
KEAQRQEENDKLRKEFAKHANAFHQWLAETRTSMMEGSGSLEQQLEATKRKAQEVRARRQ
DLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGV
SEDALKEFSMMFKHFDKDKSGRLNQQEFKSCLRALGYDLPMVEEGQPDPEFENILDIVDP
NRDGYVSLQEYMAFMISKETENVQSSEEIENAFRAITAADRPYVTKEELYANLTKEMADY
CVARMKSYIDPKTERPITGALDYIEFTRTLFQN
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaataacacccaaggagattaagatccttgaaaatcctgccgacatacaggag
cgcagggatcaggtccttggacgttacgctaattttaaatccgaagctcgtttgaagcgg
gacaaacttgaggactcccgtcgctttcagtattttaagcgagatgcggacgaacttgag
ggatggatttacgagaagctccaggccgcttccgacgagagttacaaagacccgacgaat
cttcaagctaagattcagaaacatcaggcgttcgaagctgaggtagccgctcattcaaac
gccatcgtattgctcgacaacacaggctcagagatgatagctcagcatcatttctcctct
gacgttattcgcaagaggcttgaggaactgcatcgtctttgggagctgctcctttctcgt
ttggccgacaagggattaaaacttcaacaagctcttgttctggtgcagtttcttcgtcat
tgcgacgaggtcatgttctggatccacgataaggaggcttttgtcactacagacgagttt
gggcatgacttagagcatgtcgaggttcttcagaggaaatttgacgagtttcagaaagat
atggctagccaagagtacagagtaacagaggttaatgaactcgctgacaagcttctactg
gatgggcatcctgagcgcgacactattctccgtagaaaagaagagctaaatgaatcttgg
cagaggttgaagcagctcgctattctcaggcaggaaaaattgtttggcgcccatgagata
cagagatttaaccgagatgctgacgaaactatggcctggattgcggagaaggacgtcgtt
ctgtcgtctgatgattttggccgcgatttggccagcgttcagacacttcagcgcaagcat
gagggaatcgaacgtgatctagctgctctggaagacaaggtggccactcttggtgccgaa
gcagatcgcctggctgctattcaccaggccgatcattcccagcagatccaatcaaagcat
gcagaaatattgcagctctgggaaagcttgacggccaaggcaaaggaacgaagatccaag
ttggacgagtcctactaccttcatcgattcttgaccgactacagggatcttgtttcatgg
atgaacgatatgcgagccattatatctgcagacgagcttgccaaagacgttgcaggagca
gaggcgctgctggagcgacatcaagaacacaaaggagaaattgacgcacggaaggacagt
tttgactcgactgctcgtgccggtcagcaacttcttgataggaaacattatgcagcagat
gaggtagccaggaagttggagtctcttgctgaggataagaagtccctgttagatctttgg
gaaaaacgtcgcattctgtacgagcaatgcatggacttgcagctattttatcgggacaca
gagcaggctgacgcctggatggcaaagcaggaagcattcctggctaacgaagaccttgga
gattccctggacagtgtagaagctctaatcaaaaaacatgacgactttaacaagtccctg
gctgctcaagatgaaaaaatcaaagtgctagatgactttgcccgtaagcttatcgagggt
gatcattacgcggctgaagatgtattccaacgtcggcagctcttgctcgagcggcgaggt
gcccttcttgataaatctgctcagagaagacagcgtttggctgatgcttacacgcttcaa
cagtttgagagagattgcgacgaaaccaagggttgggtgaatgaaaaactcaaattcgcc
actgacgacagctacctagacccaacaaatttgaacggcaaagtacagaaacatcagaat
ttcgagcaggagttgaatgcaaacaatacgcgcatggaggaaattctcagcacagggcaa
aagctgatcgacgaagaacattatgccagtgatcgcattcgtgcacgtcttgacgaaatc
actggcctttgggacagtcttgttcaggcgactgacaaaaagggatctaaattgcaagag
gctgcacagcagcagcaattcaatcgaaccgttgaagatgttgagctgtggctgtctgaa
gttgagggccagcttatgtccgaagattacggcaaggatttaacaagcgtgcaaaatctc
cagaagaaacacgcgctgcttgaagctgacgttgcttcccatgctgatcgtattgaaggc
attgctcaagctgcgcaacaatttgttagttcaggacatttcgacgcggataatattaag
gcaaagcaagatcaacttgtgggccgatacgcagcactgcaaagaccgatgagcattagg
aaacagcgacttcttgactcccttcaagtgcagcagttattccgagacattgaggatgag
gaagcgtggatcagggagaaagagcctgtcgcagcaagcactaaccgcggtcgagatctc
attggtgtgcaaaatttgcagaaaaaacatcaggctgtcttggcggaagtaaataatcac
gagccaagagtagctgctgtttgccaatcaggagcaaaaatgcgcaatgatgggcatttt
gcagctgaagaaattagccagaggctggcagctctcgacgatcactgggggcaattaaaa
gaaaaggctcgtcagcgcaaaacggatttagacgattccctgcaagcacatcagtacttt
gccgatgcaaacgaggcggaatcatggatgaaagagaaacgtccgatcgttttgaacacc
gattatggaaaagatgaagacagctcagaagctttgctcaaaaagcacgaagcccttgtc
agtgatttggaggcttttgctagcactatcggcgccttgagagagcaggcagctgcatgc
cgacagcaagagacaccgactatagacatagccggcaaagaatgcgtagtcgctctttac
gattatgcagaaaaatcaccaagggaagtctctatgaagaaaggcgatactctaacgctt
ctcaattcgaacaataaagattggtggaaagtcgaggtgaatgacaggcaaggctttgtc
ccggctgcttacgtcaaacgggtcgagccagaggccagtctgagtgcctctcagcaaaat
cttgccagagaacagagttcaattgcggctaggcaggctcaaattcaagctcagtatgac
gacttattgtacttggctcacgagcgtcagaataaactgaacgaaactgccaaagcgtac
gtgcttgtcagagaagcagcggaattagccacttggatcaaagcgaaggaaaatcatgcc
caggttcaagatgttggtgaagacttggagcaagttgaagtaatgcaaaagaagttcgac
gacttccaagcagatctgaaggcaaacgaagtccgattggctgaaatgaatgaaatcgcc
gttcaactgatgagtcttgggcaaaccgaagctgctctcaaaattcagactcaaatacaa
gatttgaacgaaaagtggaccagccttcaaaccctgactgcggagagagccagtcagttg
ggctctgctcacgaagttcaacgattccaccgtgatgttgacgaaacgaaagattggatt
cgtgagaaggatgctgctttgaacaatgacgaccttgggaaggatcttcgcagcgttcaa
gctctccaacgaaaacacgagggtcttgaacgagacctagccgctcttggtgataaaata
aggcagcttgacgaaatagccaatcgattgatgcaatcgcatcctgataccgcggaacaa
acttatgccaaacagaaagagatcaacgaggaatggacacagctgacagcaaaagccaat
agcaggaaggagaaactactggactcttatgatttgcagagattcttaagtgactatcga
gatttgatggcttggataaactccatgatgggactagtggcatctgaggaactcgccggt
gacgtgacaggagccgaagcactgctggaacgtcatcagagccacagggcagagatagat
gcgcgttacggcatccttccagaggaacatcgcactgaaatcgacgctcgtgctggtacc
ttccaagcgtttgaactctttgggcagcaactattgcagtcgagtcactatgctagtgtg
gaaattcaggaaaaactggaagcaatggcagaagctcgtcaagaacttgagaaagcgtgg
atccagcgccgcatgcagcttgatcaaaatttggagctccaacttttctgccgagattgt
gagcaagctgaaaattggatgagcgccagggaggccttcttaggtagcgcggatgctgta
gacagcggtgataacgttgaagcgctgattaaaaaacatgaagactttgacaaggctatc
aatgctcacgaagaaaaaatcgcggccttgcaaacacttgccgatcaattaatagctgcg
gagcattatgccgctaagccaattgacgaaagacgtcgccaggttttggatcgctggaag
catttgaaagacgcgcttattgaaaaaagatctaaattgggtgaatctcagaccttgcaa
caattctccagggatgccgacgagatggaaaattggatcgctgaaaagcttcaacttgct
actgaggagaattacaaagatcctgctaatattcaatccaaacaccaaaagcatcaagcg
tttgaagctgagcttgccgccaatgccgacagaattcaatccgttttggccatgggcact
aacctgatagacaaacatcagtgcgccggttctgaagatgctgtacaggctagacttgct
tcgattgcagatcagtgggagtatctgacccaaaagacgactgagaagtctttgaaacta
aaagaggccaataaacagaggacgtacattgccgcagtgaaagatctagacttctggctt
ggagaagttgaaagtttactgacctccgaagatgctggcaaagatctagcgtccgtgcaa
aatcttatgaagaaacatcagttggtagaagcagatattcaagctcacgaagagagaata
aaggacatgaacggtcaggccgattccttgattgagagcggacagtttgacgctgctggt
attcaggagaaacgtcagagcataaatgaacgctacgagcgtataagaaatctagccgca
cacaggcaagccagactcaacgaagccaacactctgcatcaattcttccgcgacattgct
gacgaagaatcatggattaaagaaaagaaattactcgttggttcggatgattatggtcgt
gacttgactggcgtgcaaaatctaaagaaaaagcacaagcgtctggaagcagaacttggc
agccacgaaccagctattcaggctgttcaagaagctggagaaaagctgatggacgtgtca
aacttgggagttcctgaaatagagcagcgtctgaaacttctcaatcaagcttgggcagag
ttgaagcaattggctgcgaccaggggtcaaaagcttgacgagtcactcacctatcaacaa
ttccttgccaaggtcgaggaagaggaggcttggattacggagaaacaacagctcctctct
gtggaagattatggcgacacaatggctgctgttcagggattgctgaagaaacatgacgca
ttcgagaccgattttgcagcacacggagaacgctgcaaagatatttgtgacgcaggagca
gcactggtcgacgctggtaatcaccgagccgattcaatcagccagaggtgctctcagctc
cgcaacaaacttgatcagctgtcggccctggcagccagacgaaaggcgcgattgaatgat
aattctgcatacctacaatttatgtggaaggctgatgttgtagaatcatggatcgcagac
aaggaaacacacgtgcgttccgaggagtttggtagggatttatcaactgtacaaactttg
ctaaccaaacaggaaacctttgatgcagggctgcacgcctttgaacatgagggaatccag
aatatcgctaccctcaaggataggcttgtggactccgcccatgaacaaacaccgagcatt
caaaaacgtcacgccgatgtcatcgccaggtggcaaaaacttcttgctgattcagacgcc
aggaaacaacgccttctgcgcatgcaggatcaattccgtcagatagaagagctctatctc
acgttcgccaagaaggcatcagccttcaattcctggttcgaaaatgctgaggaagatctc
actgatcctgtacgttgtaacagcattgaagagattcgcgcccttcgtgaggctcatgca
caatttcaagctagcctttcgtctgccgaagctgacttccaggctttagctgctcttgat
aggcaaataaagagtttcaacgttggtccaaatccctacacctggttcactatggaagcc
cttgaagatacatggcgcaacttacagaaaataatcaaagagcgcgatgtcgaactggcc
aaggaagcccaacgtcaggaagaaaacgacaagctcagaaaagagtttgcaaagcatgcc
aatgctttccatcagtggttagctgagaccagaacatcgatgatggagggctcaggatca
ctggagcaacagctggaagccaccaagcgcaaggctcaagaagtgagggcccgaagacaa
gacctgaaaaagatagaagaccttggtgcaatattagaggaacatctgattcttgataac
cgatacacggaacacagtactgtaggccttgcacagcaatgggatcagttggatcaattg
ggaatgcgtatgcagcacaatttggagcaacagattcaagcccgcaatcaatcgggagta
tccgaggatgctcttaaggaattctcaatgatgttcaaacactttgataaagataaaagt
ggacggctcaatcagcaagagtttaagtcctgtctcagagctctcggctacgatttacct
atggttgaagaaggtcaaccagatcctgaattcgaaaatattctcgacatcgtcgaccca
aacagggatggttatgtatccttgcaggaatacatggcgttcatgatcagcaaggaaaca
gaaaacgttcaaagctcagaagagatagagaatgctttcagagctatcaccgcagctgat
cggccatacgttacaaaagaggaactttatgcgaacctcacaaaagaaatggcagattac
tgtgtcgcccgtatgaaatcttatatcgatccaaagacggagcggccaattacgggggct
cttgattatatcgaatttacgcgtactcttttccagaattaa
DBGET
integrated database retrieval system