Neodiprion virginianus: 124303394
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Entry
124303394 CDS
T09046
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124303394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124303394
03036 Chromosome and associated proteins [BR:
nvg03036
]
124303394
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124303394
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124303394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Tautomerase-like
Motif
Other DBs
NCBI-GeneID:
124303394
NCBI-ProteinID:
XP_046616494
LinkDB
All DBs
Position
4:23054137..23068525
Genome browser
AA seq
1876 aa
AA seq
DB search
MFGQSANTSFGGFGAGTQSSPFSQSPFGKPITTTSFGGTAAPVFGSTNNSLFGAKPAGAT
TGGLFGNTAATPAFGQPATSQSSFGGFSNPNTNTGLFGNQQNANTSLFGTSNPTPAFGQG
TKPAGFGFGSSAGTGLFGQTQQPTQQTAPSLFAPSNTAANTSLFGATTGFAGNNTAGGMS
GTVVKFNPLTGTDTMIKNGVTQTISTRHYCITCMKEYEGKSLEELRLEDYTAGRKGQVQG
TQTTGLFGSAAQPSLFSNTGVNTSTANTGFGATTTGFGGTSQPTANTGLFGKPIAGFGAA
ATTSSAFPFNSTTTTSNPFGANAQAKPFGAAAPTPLFGNANTSQTAATGFGTNNTSAFGS
FGAVQPNQSIGLFNQNKPAFNMPASTASTGFGGFGQNTATNTSGGLFGVKPSGTTGFGTA
PSFGATPAPAFGTGTGFGSTQNTGTSLFNSSFKPAGQPGFSFGATPSTSTGLGVSSGLNL
GTGSLLFGQPKPGGLFSTPGTNTNFNTTGNFGLGSNFGANNNTMGSGLGTMGGGMGTNPA
QQNSGANQVHQQILALVSAPFGDSPLLKNLLPASGKTEDLLKPTNATTRALNSPQYKITT
NNSSPKIKARAVTNAQLSKKSLFEGLEEEDPALQEAFQPRANAKRLVLRPKPLSTGDAQS
LDRVATSPTVTESVRVKRDVLENANKENHQQDDIRRPADDRRSSTSWLKSSLQRPAKLPE
DEFEGQPTLFRGSDNLEEGLDNTVAELRPQNKPQSLPQSPKLLAAGDSAVNSPSNIDRST
LNSSNSSDTSDEQDETAAISQTEQEPNAACITLRRAGYYTIPPLDKLEEYVCGDTCVVPN
FTVGRKGYGNVYFPDLIDIYGLNLDEIVHFRNKEVIIYPDDDQKPPMGQGLNRRAQVTLD
RVWPHDKTLHEPITDPERLSAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKYG
LSDSDEEDEDIPANADLKKLKAIMKPRVNAAGPVNKQLVPPVTDAKLQKKHSFLKRTSQE
VQDSTLSFQSDTLNETDMALNEFYTNDQENDRSLALSPSAIFARVRGTDSHKLQLMKASF
FDTDDEDIDDGTYKTQLNFLPKSSTKIISTTETMEAMEDDQMVPSSHVPTLRSNLSMQQD
NSFLAKESRIMKDKKLAEVTDISHAKTSRLIQAFPPPIVKPATVVLQFSSEVLPLKESIV
GKLNARCVADIGIQMGRSFRVGWGPDLTLVSLSTQKQAAIVPLHGKFSDLGSYMSGRLSN
DTTSSIVQRLQIVGGGGDDVEHIETFKESIVGHLRIQLNHCILGHEGDCPVVGAGAGPAT
LHAHCNLAQELADSSNSDPLASYTSHVWNLSVALWGNLPDIQSESDEMKHQNVMVRREAL
SEWLENVIMETVLKETPEDDPSDKTILSLLSAHKLEDACKIAREAGDHCSALLMAQLGGP
PSVRELIKQQLAMWQHTEVDTELSPDKLKLFMLVAGEPLICIKNGCVNVCEDLEWKQALG
FHLWYVCPPTASVTDAVSLYESAFDASETESYASAPSPEYQEEDYEAEISSGKKVRDLCF
HLLKLYCSGNHPLEKLLNPLTHTADPLDYRLSWLIQQVLVALGYSHLSSHVAAITHMNFA
AQLETYGLWHWAIFVVLHLEDTGRRRSAVVDLLSRHVELDERSDYMKREEFLREELGIPS
MWINKAKAIKAGAMKRYGEAAWYLIHGEQWNAAHELIIEHLAADAIINENLDYLNSLLSP
LVPTECSSTINGWAHRGQLLWDYMLINEEIEALLAGNTDSTSIGYKLELLQPQLSLLCAK
INQFPCPTAKHRLCQAEIAKRTAHLARNLVLLQSNGKNSTSRILAHLVTQLPLPEDYAQQ
ELRHIVNLYVNEIGAR
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaatctgctaatacttcatttggagggtttggtgcagggacccagagtagc
ccatttagtcaatctccatttggaaaacccatcacaacaacgagttttggtggtacagca
gcaccagtgttcggcagtaccaacaattctctgttcggcgcaaagcctgcgggagcgacg
acaggcggactatttggcaatacggcagcaacacctgcttttggacaaccagccaccagt
cagtcatcatttggaggattcagtaacccaaatacgaacactggtctctttggtaatcag
caaaatgcaaacaccagtctatttggaacaagcaatcctacacctgcttttggccaagga
actaaaccagcagggtttggctttgggagttcagctggaacaggattatttggacaaaca
cagcaacctactcaacaaactgcaccgtccctttttgcaccatccaatacagctgcaaat
accagcttatttggagctacaactggatttgctggaaataatactgcaggtgggatgagt
ggtacagtggtgaaatttaaccctcttactggtactgatacaatgataaaaaatggcgtt
acccaaaccatatcaactcgacactattgcattacttgcatgaaggaatacgaaggaaaa
tctctggaggaattgcgtttagaagactacacagcaggtcgtaagggacaagttcaagga
acacaaaccactggactgtttgggtcagcagcccaaccttcactattttctaacacaggc
gttaacacaagcacagcaaatacaggttttggggcaactacaactggttttggaggaaca
agtcagcccacagcaaacactggtttatttggaaaaccaatagccggttttggagctgca
gccaccacaagtagtgcttttcctttcaactcgacgacaacaacatctaatccatttggt
gcaaatgcgcaagctaaaccctttggggctgcagctcctacaccactttttggcaatgcc
aacacaagtcagacagctgctactggatttggtactaacaatacatctgcattcggttct
ttcggcgctgtacaacctaatcagagtattggactcttcaatcaaaacaagcctgccttc
aatatgcctgcatccacagctagtactgggtttggaggatttggacaaaatactgcaaca
aatactagtgggggtttatttggtgtgaaaccatctggtacaacaggctttggcactgca
ccttcatttggtgctacgcctgctccagctttcggaactggtacaggttttggttcaaca
caaaatacgggaacatcattatttaactcatccttcaaacccgcaggacaacctggattc
tcatttggtgctacaccttcgacatctactggacttggagtaagttctggtctgaatctt
ggtactgggtctttactgtttggacaaccaaaacctggcggtctctttagtactccgggt
accaatacaaacttcaatactactggcaactttggactagggagtaattttggagcgaac
aacaacactatggggtctggattgggaacgatggggggaggaatgggcaccaatccggca
caacaaaattctggagcgaatcaagtccatcagcaaattttagcattagtctcagcacca
tttggcgattcaccgttacttaaaaacttactaccggcctcgggtaaaacggaggacctt
ttgaaaccgacaaatgcaaccactcgagctttgaacagtccacagtataagataactact
aacaatagttcccctaaaataaaagctagagccgtgacgaacgctcaactctctaagaaa
tcactattcgaaggcttagaagaagaagatccagcattacaagaagcttttcaaccacga
gctaatgcaaaacggctcgttttgcgtccaaaaccactaagtaccggagatgcacagtcg
ctagatcgagttgcaacttcgcctaccgttacagaatcagtaagggttaaaagagatgtg
ttagaaaatgcgaataaagaaaatcatcagcaagatgatattcggcgtcctgctgatgac
agaagatcctctacatcatggttgaaatcaagtttacaaaggccggcaaaattaccagaa
gatgaatttgaaggacaaccaacgctattccgaggatcagataacctagaagaaggtctt
gacaacaccgttgcagagttgaggcctcaaaacaaacctcaaagcttacctcaatcacca
aagctgcttgcagctggtgactcagccgtgaactctccatcaaacattgacaggagcaca
ttgaactcttcgaacagctctgacactagtgatgaacaagatgaaactgcggccatttcc
caaacagagcaggaaccaaatgcagcttgcattacgctgcgacgtgctggttattacaca
atcccaccacttgacaagcttgaagaatatgtttgcggagatacttgtgtcgtgcccaat
tttacagtgggtcgtaaaggatacggcaatgtgtatttcccagacctgattgacatttat
ggtttaaatctggatgaaattgttcactttcggaacaaggaggttattatttacccggat
gatgatcaaaagccacccatgggccaagggttgaatcgtagagcgcaagtaactctcgat
cgcgtctggccacatgataagactcttcacgaacctataactgaccctgaacgtttatcg
gctatgaattatgagggaaagcttcgcagagtttcggcaaaacacgataccaggtttcta
gaatatcgtccagaaaccggatcttgggtttttaaggtcgaccacttctcgaaatatgga
ctcagtgattccgatgaagaagatgaagatattcccgcaaatgctgatcttaagaagctc
aaagctatcatgaaaccaagagtaaatgcagcaggaccggtcaataagcaactagttcct
ccagtaactgatgccaaactacaaaaaaagcacagcttccttaaacgcacgagtcaggag
gttcaagattcgaccctaagttttcaatcagatactctaaatgagactgatatggcactg
aatgaattttatacaaatgatcaagagaacgatcgatcattagcactcagtccatctgcc
atttttgcacgcgtcagaggaacggatagccacaaacttcaattgatgaaggccagtttt
tttgatacagatgacgaagatattgatgatggcacctataagactcaattaaacttcctt
ccaaaaagttcaacaaaaataatttcaaccacagaaaccatggaggcgatggaagatgac
caaatggttccttccagccacgtacctacattaagatctaatttaagtatgcagcaagac
aattcatttctggctaaagagtctagaattatgaaagacaaaaaacttgcagaggtgact
gacatttcacatgcgaaaacttcaagactgatccaagcttttcctcctcccattgtgaag
cctgccacagttgtccttcaattctcttcagaagttttacctctcaaagaatctattgtt
ggaaaattaaatgctcgttgtgtagctgatattggtatccaaatgggacgttcttttcgg
gtaggctggggacccgatttgacactggtctctctaagtacacaaaaacaggctgcaata
gttccactacatggtaaatttagtgatctcggatcctacatgtcaggtcgtttatccaat
gatacaacgtcaagcattgtacaaagattgcagattgtaggaggtggcggcgatgatgtg
gagcacattgaaacattcaaggaaagtatagttggacatcttcgtatacaactgaaccat
tgtattcttggtcatgagggagattgcccagtagtaggtgctggtgcaggaccagcaacg
ttacatgctcattgcaatcttgctcaagaattggcggattcgtcaaattcagatcctctg
gcgtcttacacaagtcatgtgtggaacctgagtgtggctctttggggaaatttgccagat
atacaatcagaaagtgatgaaatgaaacaccagaatgtgatggtgaggcgagaagcactc
agtgaatggctggagaatgtgataatggaaacagtactaaaagaaacaccagaagacgat
ccatctgataaaacaatcctgtcattgctttcagcacacaaactggaggacgcttgtaaa
attgcacgagaagcgggtgatcattgttcggcacttcttatggcccaacttggagggcca
ccgagtgtaagagaactgatcaagcaacaactagctatgtggcaacacactgaagtcgat
acggagctttcacctgataaactgaagctattcatgcttgtagctggagaacctcttatt
tgtataaaaaatggatgtgtcaatgtttgtgaagatctagaatggaagcaagcattaggt
tttcatttgtggtacgtctgtcctcctaccgcatctgtcaccgacgcagtgagtctttat
gaatctgcttttgatgcatctgaaactgagtcttatgcttcggcgccaagcccagagtac
caagaagaggattatgaggcggaaataagtagtggaaaaaaagtgcgagacctgtgcttc
cacttactaaaattgtactgctccggtaaccatccgctggaaaagttactgaatccgtta
actcacacggcagatccattagattacagactaagctggttgatacaacaagtgcttgtc
gcgcttggttattctcatttatcttcgcacgttgctgcaataacacacatgaactttgct
gcccaattggaaacgtatgggctttggcattgggctatatttgttgtgctacacctggag
gatacgggcagacggcgatcagcagtagttgatcttctatcacgtcatgttgaactggat
gagaggtcagattacatgaaacgagaagaattcttgagagaggagcttggcataccttca
atgtggattaacaaagccaaagccataaaagctggggcaatgaaacgatatggcgaagct
gcttggtatcttattcatggtgaacaatggaatgctgctcatgaactcataatagaacac
ctagctgctgatgcaataataaatgaaaacctggattatttgaattcgttgttaagcccg
ttagtaccaactgaatgcagcagtacaataaatggatgggcacaccgtggtcaactactt
tgggattatatgttaatcaatgaagaaattgaagcattgctagctggaaacacagacagt
accagcattggatacaaacttgaattattacagccacaattgagtcttttgtgtgcaaaa
ataaatcaatttccttgcccaacagccaagcataggttgtgccaagcagagattgcgaaa
agaactgcacatttggccagaaacttggtgttattacaatcaaacgggaaaaattcaact
tccaggattcttgcacatttggttacgcagttacccctaccggaagactatgctcagcaa
gagctacgtcacattgtaaatttgtatgttaatgagataggagcccgttag
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integrated database retrieval system
