Neodiprion virginianus: 124303592
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Entry
124303592 CDS
T09046
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124303592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124303592
03036 Chromosome and associated proteins [BR:
nvg03036
]
124303592
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
124303592
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
124303592
RSF complex
124303592
WICH complex
124303592
B-WICH complex
124303592
NORC complex
124303592
BRF complex
124303592
NuRF complex (fruit fly)
124303592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
DUF5399
DUF4800
Motif
Other DBs
NCBI-GeneID:
124303592
NCBI-ProteinID:
XP_046616946
LinkDB
All DBs
Position
4:31076902..31081028
Genome browser
AA seq
1011 aa
AA seq
DB search
MSKPETENADAVETGENSNGSSAETTSSRGGDFETKLETDRSKRFDYLLKQTEIFSHFMT
NNQKDKSVSPLKVKAGRPRKQPEIPVKGDTSADLRHRKTEQEEDEELLAESNVSVAPTTR
FESSPHYIKSGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFRS
IPGPHIVIVPKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIRDVMMPGEWDVCVTSY
EMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPLQNNLHEL
WSLLNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKAEVEKGLKPK
KEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAE
PGPPYTTDEHLVYNCGKMVILDKLLPKLKQQDSRILIFSQMTRMLDILEDYCHWRSFQYC
RLDGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDL
QAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDAKQTALNK
DEMLNMIRHGANEVFASKDSAITDEDIDTILQKGEAKTEEMKQKLENLGESSLRNFTVDA
PTDSVYQFEGEDYREKQKILGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRP
PKQPIVQDFQFFPPRLFELLDQEIYYFRQTVGYKVPKNPELGSDAGRIQKEEQRKIDEAQ
PLTDEELTEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKDVEGKSPEEVMEYS
AVFWERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRIAYGTNKG
KNYTEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTL
ITLIERENLELEERERQERRKKGGSIGSKPASKRKQENLPAPQDKPRKKKK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggagacggaaaatgccgacgctgtcgaaacgggggagaattcaaacgga
tcgtcagcagaaacaacatcttctaggggtggcgatttcgaaaccaaactggagaccgac
aggagcaagaggtttgattacctactaaaacagaccgaaattttttctcattttatgacg
aataatcagaaagacaaaagtgtcagtcctcttaaagttaaagctgggagacctaggaag
cagcccgagattcctgtcaaaggtgacacgtcggctgatctcagacatcgaaaaactgag
caagaagaagatgaagagctccttgctgagagcaatgtcagtgttgcgccaacgactcgt
ttcgagtcatccccccattatataaaatcaggagagctgagggactaccagattcgtggt
cttaactggatgatttcgctctatgagaatggaatcaacggtatactggcagatgaaatg
ggtcttggaaaaacccttcagacgatttcattgctaggatacatgaagcatttccgcagc
attccaggacctcacattgtaattgtcccaaagtcaacgctagccaactggatgaatgaa
tttaagaaatggtgtccctcgctgagagctgtttgtctgattggagacgctgagacaagg
aacacgttcatcagagacgtaatgatgccaggggagtgggatgtctgcgtaacgtcttat
gaaatggtaataaaggagaaatcagtattcaaaaagtttaactggaggtatatggtaatc
gatgaggctcataggataaaaaatgagaaatcaaagttatcagaaattttgcgcgagttt
aagactgccaatagacttttactcaccggcacaccgttacaaaataatcttcacgagcta
tggtcactcttaaacttcttattaccagacgtgttcaacagctcagacgactttgactcc
tggttcaacaccaacagttttcttggagataattctttggttgaaaggctgcatgctgtc
ttaagaccattccttcttagacgcctcaaggctgaagtagagaagggacttaagcctaaa
aaagaaatcaaagtttacattggactgagtaaaatgcagagggaatggtataccaaagtg
ctaatgaaggatatcgacattgtaaatggtgctggaaaaattgaaaaaatgagattacaa
aacattcttatgcagctacgaaagtgctgcaatcatccatatttgtttgacggagctgag
ccgggccctccgtataccactgacgaacatttagtttataattgtggaaagatggtgatc
cttgataaactactgccaaaattaaagcaacaagactcgaggatattgatatttagtcaa
atgactaggatgcttgatattcttgaagattattgccattggagaagttttcaatattgc
cgattggatggtaacacggctcatgaagatcgacagcggcaaataaatgaatataatgct
cccgggagcgaaaagttcattttcatgttatccacaagagcaggaggtcttggtattaat
ttagctacagctgacgtagttattatttatgattctgattggaatcctcaaatggatctg
caagctatggatagagcacatcgaatcggccaacagaaacaagtgcgagtgttcaggttc
ataactgagaatacagtagaggaaaagattgtcgaacgtgccgaggtcaagttgcgcttg
gataaacttgttattcagcagggcagactagtagatgcgaaacaaacagctttgaacaag
gatgagatgctcaacatgattagacatggcgctaatgaagtatttgcttcgaaagacagt
gccataacggatgaagatattgatacgatacttcagaaaggagaagctaaaacagaggaa
atgaaacagaagttggaaaatttgggtgaatcatccttgagaaattttacagtcgatgca
ccgaccgattcagtctaccaatttgaaggtgaggattatagggagaagcagaaaatatta
ggtataggcaactggattgagccgcctaaacgcgagagaaaggcaaattatgcagtcgat
gcttacttcagagaagcgctaagagtctcagagccaaaagctccaaaggcaccaagacct
ccgaaacaaccaattgttcaagatttccaattttttccgccacgattgtttgagctactc
gatcaagaaatatattatttcagacaaacagttgggtacaaagtaccaaaaaaccctgaa
cttggatctgacgcaggaaggattcaaaaggaagagcagcgaaaaattgacgaagctcag
ccacttacagacgaggaattgacagagaaagaaaaactgcttactcagggattcacaaac
tggacgaagagggatttcaaccaattcataaaggctaatgaaaaatatggtcgagatgac
attgagaatattgccaaagatgtcgaaggaaaatctcctgaagaagtaatggagtattct
gctgtcttttgggaacgttgccacgaacttcaagacattgacagagtaatggctcagata
gagcgaggagaagcaaaaattcagagacgtgccggtataaagaaagctctggatgcaaaa
atggccagatatagagcaccattccatcagctaagaatagcctatggaacaaacaaggga
aaaaattataccgaagaagaggacagattccttgtatgcatgttgcataaacttggattt
gataaagaaaatgtatacgaagaactcagagcaaccgtaagatctgcaccacaatttcgc
ttcgattggtttgtcaagtcaagaacagctctagaactccaacgaaggtgtaacactttg
ataacgctaattgaacgtgaaaatctagagcttgaagaaagagagagacaagagagacga
aagaagggtggaagtattggatcaaaaccagcgtccaaacggaagcaagagaatcttcca
gcacctcaagataaacctaggaagaagaagaagtaa
DBGET
integrated database retrieval system
