Neodiprion virginianus: 124303638
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Entry
124303638 CDS
T09046
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124303638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124303638
Spliceosome [BR:
nvg03041
]
Complex A
U1 snRNP components
U1 related factors
124303638
Complex B
124303638
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
SL4P
HVO_2833_C
Motif
Other DBs
NCBI-GeneID:
124303638
NCBI-ProteinID:
XP_046617066
LinkDB
All DBs
Position
4:complement(19300702..19304856)
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AA seq
851 aa
AA seq
DB search
MASSDGIPPPGTVAGFPSVPPSMPPGFVPPIMPGTPYIPAPGLPPGPPSMMPPQFSIPPP
GFSFPISAGPPPDINVIAAPPQISGSPAVPTSTTSTLEPATVTPSIPTTEKKSEWTEHKA
PDGRTYYYNSSTKQSLWEKPDELKTPSELLLSQCPWKEYKSDNSKIYYHNVTTKESRWTI
PPELEELKAKLAAEEAGTVASVAVVTAAAVAGSAIVPSSTPNTALVPPVMHALSPKLVTP
QVSTPEASCKSAIEQAMAATLAAINIPTPPTKPDDDSNSTKGSANGSRNSTPEPKVQFKD
KKEAIEAFKELLKERDVPSNATWEQAVKMIQNDPRYPQMKKLNERKQAFNAYKTQRLKEE
REQERLRLKKAKEDLEQFLLTHEKMTSNTKYYKCEEMYGNLELWRSVGDSDRRDIYEDVI
FNLAKREKEEAKVMKKRNTKRLALVLDAMTDVTYKTTWQEAQALLLQHSAFAEDADLLAM
DKEDALLVFENHIRQLEKDEEEEKEREKKRRKRLERKNRDGFISLLDDLHEQGKLTSMSL
WVELYPMLSADIRFSAMLGQPGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKSFDVQV
NTTFEEFATVVCEDRKSATLDAGNVKLTYNLLLEKAEAREKERIKEETRKFKKLEIGFKN
LLKTLDVDYQMSWDDVRAKIEGESDFKAITLESERVRIFKEYQHEIEESCSHHHIRSKKK
KTKKPKRKSRSRSHSESDTSEKGVKKKTQKSRSMSPPSKSDSSESDVKKSKRKKSKKKRG
RSRSRSYSRLPSSEESPDRKRKDEKHRRTSAHSENGSVNEGAAHHHELSEDELEKQRAQL
LRELQMQQEDN
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagtgacggcattccgccacctgggactgtagctggctttccttcagtccca
ccgagcatgccgccaggttttgtgccgccaatcatgcctggcaccccttatataccggct
ccagggttgcccccaggtcctccaagcatgatgccacctcaattttctattccgccacct
ggtttcagttttccgatctccgccggacctcctcctgatataaacgttatagctgcgcct
cctcaaataagtggatcaccagctgtcccaacatcaacaacatcgacacttgagccagcc
acagtaacgccatcaattccaacaacggaaaaaaaatccgaatggacagagcacaaagct
ccagatggtcgtacatattattataatagttcaacaaagcaatcactttgggaaaagcct
gatgaattgaaaactccaagtgaattactactatctcagtgcccatggaaagagtacaaa
tctgacaatagtaaaatttactaccacaatgtcacaaccaaagaatcaaggtggactata
ccacctgagcttgaggaattgaaggcaaagcttgctgctgaagaagctggcactgttgct
tcagttgcagttgttactgctgctgccgttgccggctctgctattgtcccaagtagcact
ccgaatacggctcttgttccacctgtgatgcatgcgttgtcgccaaaactcgtgacacca
caagtaagcactcctgaggcgagctgtaaatcggcaatcgaacaggctatggcggcaacc
ctcgccgccataaatattccaactcctccgacaaagccagatgacgatagtaactcgacg
aaaggttctgccaatggaagtaggaacagcactcctgaacctaaagtgcaatttaaagat
aaaaaggaagcgatcgaagcattcaaggagctgctgaaggagcgagatgtaccctctaat
gctacttgggaacaggcagtgaaaatgattcaaaatgatccaaggtacccacagatgaag
aaattgaacgagagaaaacaagctttcaacgcttacaaaacccaacggctcaaagaagaa
cgtgaacaggaaagactgaggctgaaaaaagccaaggaggacttagaacagtttttattg
actcacgagaagatgacgagtaatacaaaatattacaaatgtgaggagatgtatggtaac
ttggagctttggcgttcggttggagactcggatcgtcgtgacatttacgaggatgttata
ttcaacttggctaaacgtgaaaaagaggaagcaaaggttatgaagaaacgtaacaccaaa
cgactcgcccttgtgttggacgccatgacagacgttacatacaaaaccacttggcaggag
gcacaagcattgctgcttcagcattctgcgtttgctgaagacgcggacttgttggctatg
gataaggaggatgctctgctagtttttgaaaatcatattcgtcaattggagaaagatgaa
gaggaggaaaaggagcgggagaaaaaacgaaggaaacgattagagaggaaaaatagggac
ggatttataagtttattggacgatttacacgagcaaggcaaactgacatccatgtcactc
tgggtggaactttatcctatgctatccgccgacatacgattttcagctatgcttggtcag
ccgggatcaacaccattagatctgttcaaattttacgtcgaagatttaaagtcacgtttc
cacgacgaaaagaaaataattcgcgaaattttgaaggacaaaagttttgacgttcaggtt
aacactacatttgaagagtttgcgacggtagtttgcgaggacagaaaatcggcgactctg
gatgctggaaatgtcaaactcacgtacaatctgttgcttgaaaaagcagaggcgagggaa
aaggagaggatcaaagaagaaacgaggaaatttaaaaagcttgaaattggatttaaaaac
ttgcttaaaaccttagatgttgattatcagatgtcgtgggacgatgttagagccaaaatc
gaaggggaatccgatttcaaagccataacactcgagagcgagagagtaaggatattcaaa
gagtatcagcacgagatcgaggaaagttgtagccaccatcacataaggagcaaaaaaaag
aagacgaaaaaaccgaaaagaaagtcacgatctcggtcccatagtgagtccgatacaagt
gaaaaaggggttaagaaaaaaacccaaaaatcacgatctatgagtcctccgagtaaatcg
gacagttctgaatctgacgtgaaaaaatccaagcgcaagaaaagtaagaagaaaagaggc
cgcagccgttcacgttcctattcaaggctaccatcttcagaagagtctcctgaccgaaaa
cgtaaagatgaaaaacatcgacgaacgtctgcccacagtgaaaacggttcggttaacgag
ggtgctgctcatcaccacgaattatccgaggatgaattagaaaagcaaagagcacaacta
ttgcgcgaacttcaaatgcagcaggaagacaattga
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