Neodiprion virginianus: 124304076
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Entry
124304076 CDS
T09046
Name
(RefSeq) RNA-binding protein 27 isoform X1
KO
K13192
RNA-binding protein 26
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvg01009
]
124304076
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124304076
03041 Spliceosome [BR:
nvg03041
]
124304076
Protein phosphatases and associated proteins [BR:
nvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124304076
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124304076
Spliceosome [BR:
nvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124304076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
PWI
RRM_1
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
124304076
NCBI-ProteinID:
XP_046618014
LinkDB
All DBs
Position
4:30891194..30896823
Genome browser
AA seq
975 aa
AA seq
DB search
MIIENPDQFKAWLTAVLEPLCDADPAALAKYVYALVKKDKTLEELRGGMVEQLDVFLQQE
TKNFVELLFKTLETQEYVLPPPKGAPEGGGTPPSINPPPPVEKQVEIIIPPPPPTGSPPQ
PAQVNGATPAIVIKRETRKSDSEKDVQEKEKRSRSRSGRIRSRTRSRSRSWERDRRRSRS
REHIRRDRERDRSRPWRNKSPPPNTRRHDRRRTRSRSTSPLRSRIRDGPDTRDHRARFRN
RSPTPLRSRSRSRSTDRKKVDRSERNEAARVERGDGSPGGGTPTQDSNHGDVDMRLSTTS
QSIQSVVAVGANPPNSQSGTLQPKRRCRDFDEKGYCMRGDLCPYDHGTDPVVLEDVALSR
VLNFGPHGPQAPGTVPVSSVPEPPPGPNGNAPPPHLPLASLPPPHLRNQHHSNMVAFAEY
NPDAPSMEPRMPWGRHPPPGPGIYGRGQRELISVPVIPHSNPSEMPHTPNNPLKRKQAFD
FNRLGPKQRVVHNPANCSLELKKVPRSLNNITQLNNHFSRFGKIVNIQVNFGGDPEAALV
TFQIPSEAKAAYRSTEAVLNNRFIKVFWHNNVNNNSTSGAIENVPPGEKNGSRPSVKERL
GATINQPIKTEENEYVPTRRATEEPVTPTVIPVSPKAPPIPSREDKVLAIKKSQEMLAAK
ETLKKKQEEKRKEAIKLTADLRKRKQELLDKQLVEIRSLIERAEKNPDQKDAIMVTIKTM
QQSIDSLRKDLATNGQVGANKSQIKTREQTQKEILDAELDLMTAQQEGQDSGELQKRLND
LKAQAAALGLNAGLGVGRGARPTKVTRGSHVLSYRGRGRGSFAHVSVDHRPTSLLISGYE
SEEKEEVLAHFQQYGEIVNQMVDDATPSIVINFKSRKEAEVALVKGRTFQDRLLSVTWVT
GHHLHRGGGGNANSNIPQPARSEQAPATADEELELEVRILSNLNISDDNGAAEALLLEEN
EEEEDEDGEPRSWRR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagagaaccctgatcagtttaaggcgtggctcactgctgtcctggagccgcta
tgcgatgcagatcctgctgccctggcaaagtatgtctatgctctagtcaagaaagacaaa
acactggaagagttgcgtggcggcatggttgaacagttggatgtatttttacaacaagaa
acaaagaatttcgttgaacttttattcaaaaccttggagacacaagagtacgtattacct
cccccaaaaggagcacctgagggtggtggaacaccacctagtataaacccaccacctcct
gttgaaaagcaagtcgagattattattcccccgcctccacctactggtagccctccacaa
ccggctcaagtgaatggagctacccctgcaatagtaattaaaagagaaactagaaaatct
gactctgagaaagatgtacaagaaaaagagaagcgatcgcgaagcagaagcggaaggata
agatcaagaacaagatcgcggtcacggtcctgggaacgagaccgaaggcgatctaggagc
cgagaacacatccgccgagacagagagcgtgacagaagccgtccttggagaaacaaatca
ccacctcctaacaccaggaggcacgataggaggcgcacaagaagccgcagtacatcacca
ttacgttcacgtattcgcgatggtcctgacactcgtgatcatagagctcggttccgaaac
agatctcctacacctcttagatctcgatctagatcacggtctacagatcgtaagaaagtc
gatagatctgaaagaaatgaagctgcacgagtagagagaggggatggaagtcctggtggt
ggaactccaacacaagacagtaatcacggagatgtagacatgagactttctaccaccagt
caatctatccaaagtgttgtagctgtaggtgctaatccaccaaatagtcaatctggtact
cttcaacccaagagacggtgtagagatttcgatgagaagggatactgcatgagaggagat
ctctgtccgtatgatcatggtactgacccagtagttttggaggacgttgctttgagtcgt
gtattaaattttgggcctcacggacctcaagccccaggcacggtacctgtttcctctgta
cctgaacctcctccaggaccaaatggcaatgctccacctccccacttaccgcttgccagt
ctaccgccaccgcatctgcgaaatcagcatcattctaatatggttgcatttgcagaatat
aatccagatgctccaagtatggaaccccgcatgccatggggtcgacatccgccaccaggt
ccaggaatatatggccgtggacagcgtgaacttatcagtgtacctgtcataccgcattca
aatccgagtgagatgccacatacaccaaataatccattaaagcgtaagcaggcgtttgac
ttcaatcgccttggaccgaaacaacgagttgtacataatccagctaattgttctcttgaa
ttgaaaaaagttccacgcagtttgaataacattactcagttaaataatcacttttcacgt
ttcggaaaaattgttaatatacaagtaaatttcggtggtgaccctgaggcggcattagtc
accttccagataccatctgaagcaaaagctgcctatcgaagtacagaagcagttttgaat
aatagatttatcaaggtcttttggcacaacaatgttaacaataattcaactagtggagcc
attgaaaacgtacctccaggtgagaaaaacggaagtcgtccatctgttaaagagaggcta
ggcgctacaattaaccaaccgataaaaactgaagaaaatgaatatgttcccactcgtcgt
gcaacagaagagccagtgacgccaactgtgatacctgtgtcaccaaaagcacctcccata
ccatctagagaagacaaagtattggctataaaaaaatctcaagaaatgttagcggccaag
gaaacgttaaaaaagaaacaggaggaaaaacggaaggaagctataaaactgactgcagat
ctgcgcaagagaaagcaggaattacttgataaacaacttgttgaaattcgatctttaata
gaacgagctgagaagaatccagaccaaaaagatgcaattatggtaacgatcaaaactatg
cagcaatccattgacagcttacggaaagatttggccaccaatggtcaagtgggagcgaat
aagtctcaaataaaaaccagggaacaaactcaaaaagaaatattagatgctgaattggat
ctaatgactgctcaacaagagggtcaagattcaggtgaattacaaaagagattaaatgat
ttgaaagcacaggctgcagcattagggttgaatgcaggacttggtgtgggaagaggcgct
aggccaacgaaggtgacacgaggaagtcacgttttatcttatcgggggagaggacgaggt
agttttgctcatgtttctgtcgaccatagaccaacaagcctcctcatttctggatatgaa
agtgaggagaaggaggaagttttagcgcattttcaacaatatggtgaaatagttaatcaa
atggtggatgatgctacaccttccatcgtcatcaatttcaaatcaagaaaagaggcagaa
gtagcactggtaaagggacgcacgtttcaggacagattattgtctgtgacctgggtaacc
ggacaccacctacatcgcggaggtggaggaaatgccaatagcaatataccccaaccagct
cgttcagaacaagccccagcaacagcggatgaggaacttgaattagaagtgcgtattttg
tcgaatctgaacatttccgatgacaatggagctgcagaagctttacttctggaggaaaac
gaagaggaggaagacgaggatggagagcctcgcagttggagacgatag
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