Neodiprion virginianus: 124304314
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Entry
124304314 CDS
T09046
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvg03036
]
124304314
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nvg00535
]
124304314
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124304314
Meiosis-specific proteins
Cohesin complex and associated proteins
124304314
Proteoglycans [BR:
nvg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
124304314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Mnd1
Motif
Other DBs
NCBI-GeneID:
124304314
NCBI-ProteinID:
XP_046618300
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Position
5:complement(22171849..22178239)
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AA seq
1202 aa
AA seq
DB search
MYIKQVIIQGFKSYREQTVVVPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RQALLHEGTGPRVISAYVEIIFDNSDGRLPIDKDEVYLRRMIGSKKDQYFLNKKIVTRSD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDDRREESKAILK
ETEGKLEKIEDFLRTIEERLKTLEEEKEELKEYQRWDKQRRCLEYTIHERELKESKKKLE
DLEESRANSGAMQAKLGADAKAAQEAVRSAAKRLKEAKKEVSSAKEERDTLSAEQQQLLK
EKTKLTLTINDLLEEVKGDNDSRKRAEQELEKLKINIAGREEELEKIKPQYEQMKGVEEE
CTRELALKEQKRKELYAKQGRGAQFTNRAERDKWIQDELKQLTKQIKDKQDHQAKISEDL
KRDAEKQIALEKKIEDHTREMERQRASIDEHNKQYYDLTKAKDQCQATRKEQYRQESVLQ
LNLSGLKEDLAKADQSLRSMAGKPILNGRDSVRKVLDTFRERRDMAHEVSSYYGPVIENF
DCDKSIYTAVEVTAGNRLFHHIVETDKFGTKILKEMNNQQLPGEVTFMPLNRLHVKVIDY
PQTSDAIPMISKLNYDPKYDRALRYIFGKTLICRNLEAATSLARTSGLDCVTLEGDQVSS
KGSLTGGYFNSSRSRLEIQKTRSELMTQISTLEEQMSTLKDELRTTEQSISSYVSEMQRT
ETKNSKAKDIFDKMKAEIRLMKEELSAIERYRTPKERSLAQCTSNLEAMTATKEGLESEL
HQELMAQLSVADQHQVDTLNDDIRRLTKENKEAFAKRMRLEADKNKLENLLTNNLVRRKD
ELVQALQEISVEDRQRQLESSKAQLADIEKRLVKVNSDFKAQNDKVSSAMKKQKAESAEV
EKWKVAEKEAQEKIEADAKDLEKLASKQNIVQQKIAECTQKITELGALPSHEAFGKLSKL
TTKQLFREMEKANNHLKKYSHVNKKALDQFMSFSDQKEKLVKRKEELDRGDEKIKELMLV
LEQRKCEAIQFTFKQVSKYFSEVFKKLVPSGHAQLVMKTADGEEGDDTVPESADSDRFVG
VGIRVSFTGHKAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRK
AVADMIHELSSDAQFITTTFRPELLEHANKFYGVKFRNKVSHVECVSREEAADFVEDDTT
HG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggttatcatacaaggtttcaaatcctatcgagaacagaccgtcgta
gtgcccttcgatccgaggcacaatgtggtcgtcggcaggaatggatcgggcaagagcaac
tttttctacgctatccagtttgtgcttagcgacgaattctcccaccttcggcctgagcag
cgtcaagcccttctccacgaaggcacgggtccacgcgtcatctctgcttatgtcgaaatt
atctttgacaactcggatggtcgtcttccgatcgacaaggatgaggtttatctcaggcga
atgatcgggtcgaaaaaagatcagtactttctgaacaagaaaatagtgacgcgaagcgac
gtcatgaatttgctcgaatcggctggattttccaggtccaatccatattacatagtcaag
cagggaaagatcaaccaaatggcaacggccccagactcgcagcggttgaaattgctccga
gaagtggccggcactcgagtctacgacgatagacgcgaggagtcgaaggcgatcctcaaa
gagactgaaggaaagcttgagaaaatagaagactttttgcgaaccatagaggagcgtttg
aagacattggaggaggaaaaggaggagctgaaggagtaccaacgctgggacaaacagcgg
cggtgtctggagtacacaatccacgaacgcgagctgaaggaaagtaagaaaaagctggaa
gacttggaagagtcacgcgctaacagcggtgctatgcaagccaaacttggagccgatgcg
aaggctgcccaggaggctgtgcgttcggcagccaagcggctgaaggaggccaagaaggag
gtgagttccgccaaggaggaacgcgacacgctcagtgctgagcagcagcagctcctcaag
gagaagaccaagctcacgttgacgatcaacgatctgctcgaggaggtcaagggtgacaac
gacagcagaaaaagagcggagcaagagctggagaagttaaaaataaacattgctgggagg
gaagaggagctcgagaagataaagcctcagtacgagcaaatgaaaggcgttgaagaagaa
tgtacgcgcgaactcgcgctgaaggagcaaaagcggaaggagctttacgcgaaacaaggc
agaggcgctcagtttacaaacagggcagaaagagacaagtggattcaggacgaactcaag
cagcttaccaagcagatcaaagacaagcaggatcaccaggcaaagataagcgaggacctg
aagagggacgccgagaagcagatcgcactcgagaagaagattgaggatcatacgcgtgaa
atggagcgtcaaagggcctcgatcgatgaacacaataagcagtattatgaccttaccaag
gccaaggatcaatgccaggcaacacggaaagaacaataccgccaggaaagcgttcttcag
ttaaatctttcgggactgaaggaagaccttgcgaaggccgatcaaagtcttcgttccatg
gctggaaaaccaatcctgaatggcagggacagcgttcgcaaagtgttggacacgtttcgg
gaacgccgagacatggcgcacgaagtgagcagctattacggccctgtgatcgaaaacttt
gactgtgacaagagcatctacactgcggttgaagtgaccgccggtaatcgactgtttcac
catatcgtcgaaacggacaaattcggtactaagatactgaaggaaatgaacaaccagcag
ttgcctggtgaggtgactttcatgcctctgaatcgcctccacgttaaagtcatcgattat
cctcagacgagcgatgccataccaatgatatcaaagctcaactacgatcccaaatacgat
cgtgctttgcgatacatatttggaaagactttgatctgtcgaaacctggaggcggcgacg
agcctggcacgaacatctggactggactgtgtgactttggagggtgatcaggtgtcttcg
aagggttctctgaccggtggctacttcaactcgtccagatctcgtctcgagatccaaaag
accaggtcagaactcatgacacagatcagcacgctcgaggaacagatgtcgacgctgaaa
gatgagctcaggaccactgaacaaagcatcagctcctacgtcagcgagatgcagagaacg
gagactaagaacagcaaggctaaagacattttcgataaaatgaaggcagagatacgactg
atgaaggaggaactcagcgctatcgagagatacagaacgcccaaggagcgcagcttggct
cagtgcacctctaatctcgaggcgatgactgctaccaaggagggcctggagagtgagctg
caccaggagttgatggctcagttgtcagtcgctgatcagcaccaggtcgatacgctgaac
gatgacatcagacgtctgactaaagaaaacaaagaggcgttcgccaaaagaatgcggctt
gaggcggacaaaaataaactcgagaatctgctgacgaataacttggtgcggcgtaaagac
gagctggttcaagcactgcaggaaatctccgtcgaggatcgtcagcgtcagttggaatca
tccaaggcgcagctcgcggatatcgaaaagcgcctagttaaagtgaactcagacttcaag
gcacagaatgacaaggtttctagcgccatgaagaagcaaaaagccgagtcagccgaagtc
gagaagtggaaagttgcggagaaggaggcacaggagaagatcgaggcagatgctaaggat
ctggaaaaactggcaagcaaacaaaacatcgtacagcaaaagattgccgagtgtacgcag
aagatcactgagctcggtgctctgccgagtcacgaagcattcggaaagttgagtaaatta
acaacgaagcagctgttcagagaaatggaaaaggcgaataatcatttaaagaaatacagt
cacgtcaacaaaaaagcactggaccagttcatgtcattcagcgatcaaaaggagaaattg
gtcaagcgtaaggaggaactggatcgcggtgatgagaagatcaaggaactcatgcttgtc
ttggaacagcgcaagtgcgaggctatacagttcaccttcaaacaggtcagcaagtatttt
agcgaggttttcaagaagctcgtaccttctggacacgcccagcttgttatgaagacagcg
gatggcgaggagggagatgacactgttccagaatctgcagactccgaccgatttgttggt
gtcggaattcgggtatcgtttaccggccacaaagccgaaatgcgagagatgaatcaactc
tcgggtggtcagaagtcgctagtcgccctggcgcttatcttcgctatacaaaaatgcgac
ccggccccgttttatctcttcgacgagattgaccaggccctcgacgcccagcatcgaaaa
gccgtcgcagacatgatccatgaactgagctccgatgcgcaatttatcactacgacattc
agacccgaacttctggaacatgccaataaattttacggtgttaaattccgtaacaaagtg
tcgcacgtcgagtgcgtatcgagagaagaggcggccgattttgtcgaggatgacacaacg
cacggttga
DBGET
integrated database retrieval system
