Neodiprion virginianus: 124304328
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Entry
124304328 CDS
T09046
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124304328
Membrane trafficking [BR:
nvg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124304328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
DUF4407
NleF_casp_inhib
C1_2
PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
124304328
NCBI-ProteinID:
XP_046618328
LinkDB
All DBs
Position
1:complement(38712989..38734097)
Genome browser
AA seq
1519 aa
AA seq
DB search
MFAKKQWKLKRVFNATQCFLKLQKTDECPNSGEDSDEDVITDYLSSANPNNSRVARGTDD
ELDGLTLDGGASESEYTKDGSSVIVMSDRGLDQLKQQPGGIGAQLRSTGPLVPIISVTPH
SPGFAKHYPVLDDNLRQLHEIHESIQRMRDLTLTTTGHNARSRLHRHHTQRLSSSCPSLC
PLNPVPLRTHEHQDTSSDPDLLVDGSANSSPTHFPSSNRHLPHGSQGVDRRRSWTDLEDS
RRGSRHSGQDHHLHLQARTMDETNVLNDFSFQRQRSISLSSLESELDLDLDSKPHPTGTV
PGSKASRSQASTHSLNEADLIQGDFQKIVAKRERLGESGGLMPGITGSRLPLQKSISTPS
IVTPPVHTHLTDSGTRTTPLLTAILHGPGRHDRGSGSETETEDLIPQRSHGFHGDLAREG
TPNAQASFDELLTDGVVDDDNHSEKTRRKRGSLFFRKKKDKSGKKANQSQQHQWVSVAAA
SHQSGATCDFCTKQLVANKPALHCENCGATVHQSQGCKDQLTLECVKQKQHSSKSGSKSV
SGTPAATNNAKRGSTSSLPPPLSTNSGREISNKKTATGYSPWRRVATKLGVNQTINEERD
GDSTGHHREAPSNWEEHEFGEESHQFNVGDLEGLDPELGLGKEEPDSWTAAVGRNVARGL
VNSCEREVKRQEHIYEFVLTEKHHCLVLLAMERIFADGLRRHFGLPPTDLERMFPRLRDL
TDIHLKFLLKLRRRQQSNSVVPTIADILIEQFSGGNATSMKSAYGDFCSRHREAVNAYKY
YYRSEPRFVRFVRHCQANPLLKKKGIPECILFVTQRLTKYPLLVEPLIKTGVASHEVEDL
RQALLLVKQILGDVDAQVADKERADRKLEIYHRIEAKSFATHRGMKFKKSDVLGSNRTLK
FEGTAFLMQGRSKMAPVVVVVLSDVLFFLAETRDQKYAFFAPDNKAGVVSLQKLLVREKA
GQESRGIYLISSNPSDPEMFELKVQKPKDKQLWIQAIRAAVETCPQDLENENDELGNNGE
NEHRDNRSSSVSTISAEERQRIVDAKQSHIRDIVDELRKKDVEQAALLEEKMGLQLRLRS
ATGVWNTNESDNERESREDRELPDCSKLVPDYKRLVHADIGLVWSEAVVAVQKAMRLASS
LSFSTGSATLSRSLSSAGERHSEAYVPPALCVPRRAETFAGFDHNKERSPWRDNTTLNSV
IPPMKIGNLLSELGEGKEDEEADTETDGNRDQQLAAVQLSHYVYRLFCIVAIQMTTINSL
QAQLAAWKDGSGKSTNNRPNPNRQLEELRNLQDQLSREKAAWRASTQQERTELDEQRAQL
SRLRDQLTAEQRDVTQQRDQLYRRLEALERQGVSLVTPAATGAAPAHGSQSTDTLPSRKS
QDNKRIPLNLISATNQQKVQSSLPPVKQQLPLKLASGSNNNNSRSSSIIANNSPDRHSRA
GSSPAIVTSSSFSSPDLSSSNSFSNINTNTQTRLRATRSPPEQPHHHHHNQQQQSQQSQQ
QQHQQQRTEQPLEEEVIFF
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaaaaacagtggaaattgaagagggttttcaacgcgactcaatgtttcctg
aagcttcagaagacagacgaatgtccgaacagcggagaggacagcgacgaggatgtaata
acggattacctgagttccgcaaatcccaacaatagccgtgtagccagaggaacagacgac
gagttggatggtttgacgcttgacggaggtgcctcagagtccgagtatacgaaggacggg
tcttctgtcattgtaatgtcggacaggggtctcgaccagctcaagcagcagcctggagga
atcggtgcacaactgcgctctacggggccactggtaccgataattagtgtgactccccat
tctccaggatttgcaaagcactatcctgttctcgatgacaaccttcgtcaactgcacgag
atacacgaaagcattcagcgaatgcgggatttgacgctgaccactaccggtcacaatgct
cgctcccgcctccatcgtcatcacacgcaaaggcttagttcttcttgtccctcgctttgt
cctctaaatcccgtccctctccgtactcatgagcatcaagataccagctctgaccccgac
ttgttagtcgacggttcggcaaacagttcgcccacccattttccctcatctaatcgtcac
ttgccccatggaagtcaaggagtcgacagacgacgaagttggaccgatcttgaggattca
agacggggttcgcgccactctggacaggaccatcaccttcatctacaagcccgaacgatg
gatgaaacaaacgtcttgaacgatttttcgtttcagcgtcagcggagcataagcctcagt
agcttggagagtgaactagatttagatttagatagtaagcctcaccccactggaacggta
cctggaagcaaagcgtctagatcacaagccagtactcattcactcaacgaagcagatctt
attcagggtgactttcagaagatcgtggcaaagagagagaggctgggcgagagcggagga
ctgatgcccggaattactggctctcgtctaccactgcagaaatccatttcaacaccctca
attgttacaccccctgtccacacgcatcttaccgattctgggactcgaactactccttta
cttaccgctattctacatggcccgggacgtcacgacagaggcagcggaagcgagacagaa
acggaggatcttattccacaacgaagccacgggtttcacggagatttggccagagaaggt
acacccaatgcacaagcctcctttgacgaactacttaccgacggagttgtggatgacgat
aatcattctgagaagacacgtcgaaagcggggctctctattctttcgtaagaagaaagat
aaaagcggcaaaaaagcaaaccaaagtcaacagcaccagtgggtgtcggtagctgcagcc
agtcatcaaagcggagcaacgtgtgatttttgcaccaagcagctggtggccaacaagcca
gctctacactgtgaaaattgcggagctactgttcatcaaagtcaaggatgcaaggatcag
ctgacgttggagtgtgtcaaacagaagcaacattcatcaaaatcgggatccaagtccgtg
tctggcactccagcagcgaccaacaatgctaagagagggtcgacgtcttcattacctcct
cctttgtcgacgaacagcgggagggagattagcaacaagaaaaccgcaacgggatacagt
ccttggcggcgagtcgccaccaagctaggagtcaatcaaacgatcaatgaggaaagagac
ggggatagcactggacaccatcgtgaagcgccaagtaactgggaagaacacgaatttggc
gaagagagtcatcagtttaacgtcggtgatttagaggggctggaccctgagttgggcttg
ggaaaagaggaacccgattcatggactgcagccgtggggcgcaatgtagccaggggtctt
gtaaatagctgcgagcgcgaagttaagcgacaggagcacatatacgagtttgtcttgaca
gagaaacatcactgccttgttttactggctatggagcgaatattcgctgatggccttagg
cgtcattttggcctaccacctacagatctcgaacgaatgtttcctcggctacgagatctt
acagatattcatctaaagtttctgttaaagctgaggagacgccaacagtccaactctgtt
gtgccaactatagcggacattttgatcgaacagttttcagggggtaatgctacatcaatg
aaaagtgcgtatggtgatttttgtagtcgtcaccgtgaagcagtgaatgcctacaaatac
tattatcgcagcgagcccagattcgttcgctttgtacggcattgccaggcaaatcctctc
ttgaagaagaaaggcattccagagtgcattctcttcgtcacccaacgattgacaaaatac
ccgctactcgttgaacctctgatcaagacaggggttgcatcccatgaagtcgaggatcta
cgccaagcgttgcttcttgttaagcaaattttaggggatgtcgatgcccaagttgccgac
aaggagcgagctgatcgaaagctagaaatctatcacagaatcgaggctaagtctttcgcc
acgcatcggggtatgaagttcaaaaagtcggatgtgctaggaagcaatcgtaccctcaaa
tttgagggtacagcattcttgatgcaaggtcgtagcaaaatggcacctgtggttgttgtc
gttctatcggatgtattattctttcttgctgaaacaagagatcagaaatatgcattcttt
gcaccagataacaaggctggtgttgtctcacttcagaagctacttgtgagagagaaagct
ggacaagaatccagaggcatttatttgataagcagtaacccctcggatccggaaatgttt
gaactgaaagtgcaaaaacccaaggacaaacagctctggatacaggcaataagagctgca
gttgaaacatgtccgcaggatttagagaacgaaaatgacgaactgggtaacaacggagaa
aacgaacatagggataaccgttcctcatctgtatcaacaatatctgccgaagaaagacag
cgtattgtcgacgcgaaacagtcacatatacgcgacattgtcgatgaactgcgaaaaaaa
gatgtagaacaagccgcgttactcgaagaaaagatgggattgcaattgagacttcgatct
gctaccggtgtgtggaacacaaatgaaagtgacaacgaacgagagagtcgagaagacaga
gagttgcccgactgcagtaaattagtgccagattacaaacgacttgtgcacgctgacata
ggtttagtctggagcgaggctgttgttgctgttcagaaggcgatgcgacttgccagttca
ttgtcatttagtacaggaagtgcaacactttcacgtagtttaagctccgctggtgaacgg
catagtgaagcctatgtgccgccagcactgtgtgtacctagacgtgcggaaacgtttgct
gggtttgatcacaataaggagcgttccccgtggcgcgacaacacaactttgaactctgtc
attccgcccatgaagattggtaatttattaagtgaattgggtgaaggaaaggaggatgaa
gaagcagacactgagaccgatggaaatcgagatcaacaattagctgccgttcagttgtca
cactacgtttataggctcttttgtatagtcgcgattcaaatgacgacgatcaacagtctc
caagcacagctagcagcttggaaagacggaagtggaaagtcgaccaataaccgaccaaat
ccgaatcggcaactggaagagctacgcaatctgcaggatcaacttagccgtgaaaaggcg
gcgtggcgtgcgtcaactcaacaagagcgtacggaactggatgaacagcgggcccaactt
tcaaggctacgggatcaacttacagccgaacagcgtgatgtcacgcaacaacgcgatcag
ctgtatcgccgactcgaagcgttagagagacaaggtgtttctctggtaacaccggctgca
accggagctgcacctgcacatggaagccaaagtactgacacattgccatcgcggaaaagt
caggacaacaaacgtataccattgaatttgatcagtgctactaaccaacagaaagttcag
agcagccttcctccagtcaagcaacagctgcctttgaagctggccagtggcagcaacaat
aataattctagaagctcgagcatcattgccaataacagccctgatcgtcactcaagagct
ggtagcagtccggcaatcgtgacaagctcatcgttttcatcacctgaccttagtagcagc
aatagttttagcaatattaacaccaacacgcagactcgattacgagcaacacgttcgcct
cctgaacagccgcatcatcaccaccacaaccaacagcagcagtcgcaacaatcacaacag
caacaacatcaacagcaaaggacggaacaacccctagaagaagaagttatatttttctga
DBGET
integrated database retrieval system
