Neodiprion virginianus: 124304387
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Entry
124304387 CDS
T09046
Name
(RefSeq) DNA polymerase beta-like isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124304387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124304387
Enzymes [BR:
nvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124304387
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
124304387
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
124304387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH
Cdd1
HHH_3
HHH_2
MG3
DUF4332
Autophagy_act_C
Cytomega_UL20A
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
124304387
NCBI-ProteinID:
XP_046618476
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All DBs
Position
5:25529822..25532950
Genome browser
AA seq
337 aa
AA seq
DB search
MSKRKAPDNADNLNSDLSDFLIELANYERNVSKNIYKYNAYRKAAGTLAALSYRVKNGEE
AKKLPGVGEKIAKKIDEFLQTGKLQKLEKINADGISAPINLMTRVSGIGPSKAKELVDAG
IKTLEDLRKNQDKLTHHQKIGLKYFQDFEQKIPREEVRRLEFSLKSVIANLDKEYILTIC
GSYRRGKDESGDIDVLITHPKFTSESMDAKNKGGMLKNIVKHLEKEGIITETISIGNTKF
MGVCRDPAESSKPFRRLDIRVTPSDHYYCAVLYFTGSDLFNKNMRAHALKKKFTLNEYTL
KHLTLEGLPGNAELITSEEDIFSKLGLPYKKPEERNS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaaaggcacccgacaacgcagacaatctaaacagtgatctctccgatttt
ctgatagagctagcaaattacgagcggaatgtcagtaaaaacatctacaagtataacgct
taccgtaaagctgctggaactttggctgcactatcataccgagtgaagaatggtgaagag
gcaaaaaagttgccaggggttggagagaagatcgcaaaaaaaattgatgagttccttcaa
accggaaaattacaaaaacttgaaaaaattaatgctgatggcatcagtgctcctataaac
ttgatgaccagggtatcaggaattggaccatcgaaggcaaaggaattggtagatgctggt
ataaagactttggaagacctgagaaaaaaccaagataaattaacacatcatcagaaaatt
ggtttaaagtactttcaagattttgaacagaaaattccaagggaagaggtgcggcgactc
gagttcagtctcaaatcagtgattgctaatttagacaaagagtatatacttacaatctgt
ggtagttatagacgtggaaaggatgagagtggcgatattgacgtcttgataacacatcca
aaattcacatccgaaagtatggatgcgaaaaataaaggcggtatgctaaaaaatattgtt
aaacatcttgaaaaggagggaataatcacagagactatctctatcggcaacacaaagttt
atgggtgtttgccgagatccagcagaatcgagtaaaccatttcgccgactggatataaga
gttactcccagcgatcactactactgtgccgtattatattttaccggcagtgatttattc
aataaaaatatgcgggcacacgcacttaaaaagaaatttacgttgaacgagtataccttg
aaacatctaacattggaagggttaccagggaatgctgaattaatcacaagtgaagaggat
atcttcagtaaacttggacttccatacaaaaaaccagaagagaggaattcataa
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