Neodiprion virginianus: 124304525
Help
Entry
124304525 CDS
T09046
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
nvg
Neodiprion virginianus
Pathway
nvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124304525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvg03000
]
124304525
Transcription factors [BR:
nvg03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
124304525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
TPR_22
ORC6_2nd
Motif
Other DBs
NCBI-GeneID:
124304525
NCBI-ProteinID:
XP_046618849
LinkDB
All DBs
Position
5:7937639..7946038
Genome browser
AA seq
1045 aa
AA seq
DB search
MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA
CRKSSTPTVGRTGPNVEGNCVSLTRLLHLCNLSLIQFFTKSKNWADMANMPQDFRSKIDK
LERNFTVSMLIFKKYQPIFTDIFKNPADDVARPSRSRRQRAMPCTPSRVFEFCWTLFVCI
KGAFPDISHDLVNLNHLLLACCDLIYSNALLANRRDLLNPNFAGLPANYNNDDYVPPETA
NCIISLLCETREGIAVEAKVIKEYYLKDHINKLFNDKVLRGDQSNFSGILEPLNFDGNSK
AVNKAYEQHVLSVGDFDERKFLAEWRRVRLNRISANEMLSRDITFRGKIPRHYKLKDADA
SDNIGSPTLINNAGDFHEKFTLKHEQYGGQMQHLAPPTPLTGRKYLRSKDVANVTLLSTA
TQGVCRLQALLAGRKPAPSDTLKEILNSCTQDTEATIEARVNEIGEQFYRNYTQNTEDSD
TTNVDFGRKRLQLAQTLFYKLLETILSDEKRKNPNFDIMNLVSQEIFHQCLFACCLEIVI
YSYKSHRSFPWILTAVNVEPYYFYKVIEIIVRSEDQLSRDIVKHLNVIEEKILETLAWKS
ESPLWVAIENTKGGVPSYEEVSLPGTLHLDTVDPNTPGQPVLRRLALDRGNHHDVQQSPI
SSASERFQSPVAVTGLAKKRLFSEGRLSGQQSVLRVGSGQSVLQSKLSSVEGDQKLQLAP
NQITVLKTACPIGTNTPLQQISVNKESAKARRMGSVALFFRKFYHLAWVRMNDLCTKLEL
IDTDLKKKIWTIFEYSVKDQTELMKDRHLDQILMCAVYVICKIAKLDRNSFTEIMRCYRL
QPQAESHIYRSVLIAKVGANYMNDRELEICDDNMDENNGDAPPTPTCMAGTSQNFGTQIR
GDLIKFYNTVYVPQVKEFANKFTSRGGSTNLTLSPLPKSKSTIQSPVRRVTNSVMTRTLD
PKAITASPAPQLSYCFSRSPAKDLEAINRMMISVDARKSVGKRLLADDTTVDMNAAEQSP
AKKTTTPFVARKLENIIGERRTQSQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtcggacgatgttgaagattctacgtacagtaggcatcaagatttatgccaa
aaactcaatatggacgcgacagcagcttctgaagcttggaaatcgtacgagactattcga
cagaattacactcttgagggagatcaactgcattggataggctgtgcattgtacgttgcg
tgtcgaaagtcatcgacaccaacggttggtcgaacaggcccaaacgtcgaggggaactgc
gtgtcattgacacgtcttcttcatttgtgtaatttgtcactgatacaatttttcacaaaa
agtaaaaactgggcagacatggcaaatatgccgcaagattttagatctaaaattgacaaa
cttgagaggaattttactgtctcgatgcttatcttcaaaaagtaccaacccattttcacg
gacatattcaaaaatccagctgatgatgtcgctagaccctccagatctaggaggcagaga
gcaatgccatgtacaccatcgagagtttttgagttttgttggacactgtttgtatgcata
aagggagctttccctgatatttcacatgatttggtcaatttaaatcatttacttcttgcc
tgctgcgatctgatttatagcaacgcactgttggccaacaggagagatctgctcaatcca
aattttgctggtttacctgcgaattacaacaacgatgactacgtacctccggagacagca
aactgtattataagtttactgtgtgagactcgtgaaggtatcgctgtggaggctaaagtg
attaaagaatattacttgaaggatcacataaataagttgttcaatgacaaggttctgcgt
ggagatcaatcaaacttctcaggtatcctggagccgttaaattttgacggcaacagcaaa
gccgtcaacaaagcatacgaacagcacgttcttagtgtcggtgattttgacgaaagaaaa
tttttggccgaatggagacgagtgagactgaatagaatctcggccaacgagatgcttagc
agagatattacattccgcggtaaaatacccaggcactacaagcttaaagatgccgacgcc
agtgacaatattgggtcaccgacattaattaataacgcaggcgatttccatgagaaattt
acacttaagcatgaacaatatggtggtcaaatgcagcatttagcacctccaactccactg
actggccgcaagtacctgcgatccaaagatgtagcgaatgtaacattactatcaacagca
acacaaggcgtttgtcgtttacaagcgctcttagctggtcgtaagccggcaccaagcgat
actcttaaagaaatactaaatagttgtacacaggataccgaagcgacaatcgaagcaagg
gtcaatgaaattggtgaacaattctatcgtaattacacccaaaatacggaagacagtgac
accacaaatgtggattttggtagaaaacgacttcaactagcacagactttattctacaaa
ctattggaaacaattttatctgatgaaaaacgtaaaaaccccaattttgacattatgaac
ctagtgtcgcaagaaatatttcaccagtgtctctttgcctgctgtttggagattgtgatc
tattcttataaaagtcatagatcattcccatggattttaactgccgtcaatgtggagcca
tactacttctacaaagtaatcgaaattattgtaagatcagaagatcagttgtcacgtgac
atagtgaagcacttgaatgtgattgaggaaaagatactagaaactctagcttggaaaagt
gaaagtcccttatgggtagcaattgaaaacaccaaaggaggcgtaccaagctatgaggaa
gtttctttacccgggactttacatttggatacagtagatcctaatacacctggacaacct
gttttgagacgcttggcattggatagaggtaaccatcatgatgttcagcaaagcccaatt
tcctctgcttctgaaagatttcaatcaccagtggcagttacaggcttagctaagaaaaga
ttattctcagaaggtagacttagcggtcaacagagtgttcttagagtcggctctgggcaa
agtgtgttgcaaagtaaactatcgtctgttgaaggtgatcagaaattgcagttggctccg
aatcagataacagttttaaaaacagcgtgtccaatcggcacgaatactcccttacaacaa
atttcggtgaataaggaatcagcaaaggcaaggcgaatgggttcggtagccttgtttttc
aggaaattttatcaccttgcttgggtccgaatgaatgacttatgcacaaaattggaatta
attgatacagatttgaaaaagaagatatggacaatatttgaatattctgtaaaagatcaa
acggaacttatgaaggatagacatttagatcaaatattaatgtgcgctgtatacgtaatc
tgtaaaatagcaaagctcgacagaaattcattcacagagatcatgcgatgctacagattg
cagccacaagcagagtctcacatttatagatctgttctcattgctaaggttggtgcaaac
tatatgaatgacagagaattagaaatttgtgatgataatatggatgaaaataacggtgat
gctccacccactcctacttgtatggctggcacatctcaaaattttggtactcagatacga
ggagatttgatcaaattttacaacacggtttacgtaccacaagtgaaagaattcgcaaat
aaatttacgtccagaggcggatctacgaatttaactttgagtcctttaccaaagagtaaa
tcaacaatacagtcacccgtcagacgcgtcacgaacagtgttatgacaagaacactggac
ccaaaagctatcacagcctcacctgcgcctcagctaagctattgtttcagccgcagtcct
gccaaggatctggaagcaatcaaccgaatgatgatatctgttgatgcaagaaaatctgtt
ggaaaacgccttctagctgatgatacaactgttgatatgaatgcagcagaacaatctcct
gctaagaaaacgacgaccccttttgttgccagaaaattggagaatataataggtgaacgc
cgcacgcaaagccagtaa
DBGET
integrated database retrieval system
