Neodiprion virginianus: 124304576
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Entry
124304576 CDS
T09046
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
nvg
Neodiprion virginianus
Pathway
nvg03008
Ribosome biogenesis in eukaryotes
nvg03013
Nucleocytoplasmic transport
nvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124304576
03015 mRNA surveillance pathway
124304576
03008 Ribosome biogenesis in eukaryotes
124304576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124304576
03009 Ribosome biogenesis [BR:
nvg03009
]
124304576
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124304576
mRNA cycle factors
Stress granule specific factors
124304576
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124304576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
124304576
NCBI-ProteinID:
XP_046618934
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All DBs
Position
5:complement(31073819..31081115)
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AA seq
633 aa
AA seq
DB search
MPKKSSKAQWNGRDPAAQNVQGKHYFDHDNRTIHPNSGRPRVSFKSQGRHGPDRGRNLKT
GLTNYLGEDISMTVGASNGPRQVLVRGKIGRRASWGRLIPFPQHGRREGRQGSQHRPPMF
ADSNWFKVTIPYGHKYQKDFVVKSLNSYISPDMFVPIMYKVLPNEAVFYVDDPNTADKLY
NCDRKITTNDGFKIQVRVKPGFPQVEIDQTLRERMKLAMVKRYVQETNALDLSKFHQDPD
LVTDYFCALFRPLMLAAVIDIVAEHIPNLEALNLDGNKLAVIERLNILTKKLPKLKVLYI
GENRIQEVSHLDVIKDLKLEELRLAGNPVCAKYKDRQTAYFSDVRKRFPRLLKLDGIILP
PPIRFDVADETASLPPTQRMYVVNTDAQAIAGQFLQQYFMIFDSDNRQPLLDAYHEQASF
SMTVSYGSNANKLDSYLRENRNLFRLNDIERKRKLLKQGRLPVVSFISEMPKTKHDLDGF
TMDLCLATETMMMIIVTGLFKELDGKKNPIRYFNRTFLIVPEGGGYCICNEQLHISHPTD
EQEKKAFTVRQSQPSSSSTPASTSSGTSVVTGISDEAKQHMTIALSEKTKMNLEWSFKCL
AEVQWDFNNALAAFQEFYTLGQIPPEAFLPNKT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaaatccagcaaagctcagtggaacggaagagatcccgctgcgcaaaacgtg
cagggtaaacactacttcgatcacgacaatcgcacaatccacccgaactccgggagacct
cgagtgtcattcaaatcacaaggaagacacggaccggatcgaggaagaaacctcaaaact
gggttaacaaattacctgggcgaagacatctcaatgaccgtaggagcgagcaatggacct
aggcaagtcttggtcaggggcaaaatcggtaggcgggcgtcttggggtagattgattccg
tttccgcagcatggtcggagagagggaaggcaggggtctcaacaccgccctccaatgttc
gcagactccaactggttcaaagttacgataccgtatggacacaagtaccagaaagacttt
gtagtgaagagcctgaacagttacatatcacccgatatgttcgtaccaataatgtacaaa
gtcttaccaaatgaagccgtgttctatgtcgatgacccgaacaccgccgacaaattgtac
aactgcgatcgtaaaataactaccaatgatggattcaagatacaagtaagggtaaagcct
ggttttccccaagttgaaatcgatcagacgcttagagaaaggatgaaacttgccatggta
aagagatacgtgcaggaaactaatgctctagatctttccaaatttcatcaagatcctgac
cttgtaacagactacttttgcgccttattcaggccactgatgttggccgcagttatagac
atcgtcgccgagcacatacccaacttagaagcattaaatttagatggtaacaaactggca
gttatcgagcgactcaatattttaaccaaaaagttaccaaaactcaaagttttatacatc
ggtgagaatcggatacaggaagtcagtcatctggatgtgataaaggacctaaaactagaa
gaactgaggctcgctggtaatcccgtttgcgcaaagtacaaagatcgtcaaactgcatat
ttcagtgacgtacgaaagaggtttccaagacttctgaaactggacggaattatactccca
ccgcctattcgatttgacgtcgccgacgagacagccagtttaccgcctactcaaagaatg
tacgtcgttaacacagatgcgcaagcaattgctggccaatttctgcagcagtatttcatg
atattcgacagtgataatcgtcagccattgctagatgcatatcatgaacaggcctcattt
agtatgactgtttcttatggaagtaacgccaataaactggatagttacctacgtgagaat
agaaatctgttccgccttaacgacatcgagagaaaacggaagctactaaagcaaggcaga
cttcctgtagtttcctttatatcagaaatgcccaagactaaacatgacctggacggcttt
actatggatctatgcttagccacggaaaccatgatgatgataatcgttaccggattgttc
aaggagctggatggcaagaaaaatcctatccgctacttcaatcgaacttttctcatagtc
cccgagggtggagggtactgcatttgcaatgagcaattgcatattagccatccaaccgac
gagcaggagaagaaagcattcactgtgcgacagagtcagccatctagttcctcaacaccg
gcatcaacatcatcaggtacatcagttgtaactggaattagtgacgaagcgaaacaacac
atgacgatagcgctaagtgaaaagacaaagatgaacttggaatggagtttcaaatgcttg
gcggaggttcaatgggactttaataacgctttggcagcgtttcaggaattttacacactt
ggtcaaataccgccggaagcttttttaccgaacaaaacgtga
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