KEGG   Neodiprion virginianus: 124304580
Entry
124304580         CDS       T09046                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
nvg  Neodiprion virginianus
Pathway
nvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124304580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nvg03041]
    124304580
Spliceosome [BR:nvg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    124304580
 Complex C
   U5 SnRNP specific factors
    124304580
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 eIF2A Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Nbas_N Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 WD_LRWD1
Other DBs
NCBI-GeneID: 124304580
NCBI-ProteinID: XP_046618946
LinkDB
Position
1:complement(26111613..26113601)
AA seq 371 aa
MHSSAARWLVVCEQTFYNFTITMPILDKRKGDEILALVPASKRTKNEVVFSSREKAVIQS
GPPRTSSLMAPIMLLEGHQGDIFSVEFHPEGQYLASTGFDRQIFIWNVYGECENIAVMSG
HSGAVMEMHFSPDGSNLYTASTDMTLGLWDLGSGYRIKKLKGHTSFVNSISGARRGPTQL
CSGSDDSTIRVWDPRKRGQCQTLNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAV
LYRLKGHTDTVTGLSLSPDGSYILSNSMDNTLKIWDVRPFGPYERCVKILSGHQHNFEKN
LLRCAWSPDGSKVSSGSSDRFHYIWDTTSRRILYKLPGHNGSINDVDFHPKEPIVVSGSS
DKQIYLGEIEG
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgcacagttcggctgctcgctggttggttgtttgtgaacagacattttacaattttaca
ataacaatgccgatcttagacaagagaaaaggtgatgagattctagcattggtgccagct
tcgaaaagaacgaaaaatgaagtggttttcagcagtagagaaaaggcggtgatccaaagt
ggccctcccagaacttcatcacttatggcgccaattatgctccttgaaggacaccaagga
gatattttctctgttgagtttcatccggagggtcaatacctcgcatcgacgggttttgac
agacaaatatttatatggaacgtctatggcgaatgtgagaacattgctgtaatgtcgggc
catagcggcgcagtgatggaaatgcacttcagcccagatggcagtaacttgtacactgca
agcacagatatgaccctgggactctgggatctcggatctggatacagaataaagaaactc
aaaggacacacatcgtttgttaattctatatccggagctcggagaggacctacacaactt
tgttctggcagtgatgatagcactattcgtgtctgggatccaagaaaaaggggccagtgt
cagactcttaataatacctaccaggtaactgctgtgacattcaatgatacagcggaacaa
gtcatcagcgggggtattgacaacgacattaaagtttgggacttacgaaaaaacgcagtg
ctctatagattgaagggtcacacagatacggttactggtttgagcctgagtccagatggt
tcttacatattatcgaattcaatggacaacacccttaaaatatgggacgtccgtcctttt
ggaccctatgaaagatgtgtaaaaattttatccggccatcagcataatttcgagaagaac
cttctgaggtgtgcatggtcaccagatggcagcaaagtgtcttcaggatcgtcagataga
tttcactatatctgggacacgacaagccgacgtatcctttacaagctccctggtcataat
ggatcaattaacgatgttgattttcatccaaaagaaccaatcgttgtttccggctccagt
gacaaacagatataccttggagaaattgaaggctga

DBGET integrated database retrieval system