Neodiprion virginianus: 124304820
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Entry
124304820 CDS
T09046
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
Organism
nvg
Neodiprion virginianus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_3
RTT107_BRCT_5
Prok-RING_4
zf-RING_4
DUF547
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124304820
NCBI-ProteinID:
XP_046619451
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All DBs
Position
5:complement(4685930..4693718)
Genome browser
AA seq
1741 aa
AA seq
DB search
MNEFEVDTEVKRIAEAIASSRETLQCTFCRQLPNEAVSGKCGHPICKNCASKICGTRKAI
CPICKTILTRSSIRKVKAIDDAVKCLKRLIDAFETDSRTNFLSFNLIPTKQDKDPKPSTS
GIVEHHFVTNQPQRSRKSSAADGIRRRATIDSGETLKITRRNSLHRNEDLTSMSNESNTT
LGKGHASMVHGLLAKSEPLEPNEKVGLWLDSEEFDEQLVVVGEIEKPVIPLVPSIATTEV
PDSASIDRPNSRMSLQSSRKTTSLTKKNRASSTPKKKKNGITYNTTREENMFDELCGKKV
SEQPTQNRKVKIASSSADSSWCKLEQFEQETSAKVRKRKRLNISIEKPSTSKQVVGTLDL
ECSEDDDKIEDAKSSENLIDSNNVQGKNKPHIISDRKLETEEILYLPKLNKRQVKEIIGV
SCTQTDFDTSKNSSFSPEKSPTKLRNNQTSLRKSDNSNHNNSNDSLPLQIEPEKDTTSCI
ESIVRPKSRLSLSLSGSRPSSRLSHKSPSESTVRILQQRTDEKSPILGMSSVRVSFHQND
EETKEGTQRNQSNSSTGKDRSIRSCSGFMKRNLVLKRLSSESGKHNVSMLKRGKLYRSRS
NVKFLRLGSIISRTLRNELKNIFCSGKVSTCDVETQTNSRLTQTNHMVCSVCKKHVSSEA
LDNVIIPETRTVSSVSSKSKATQIKEVGTSDPATQRALIEEEFDTVNKVNMMSPKEDSQL
KYLSTESPTVDNTERSVKKRRRSPDLQEYAQAIENYANKLIVTDSEDQDTPCQEKFLSSK
EINDQTQEKKISSLGTTFSTKTSLLSKITDNPNCLLNLSKSRSPSSRSDTKSLHTSPKRR
IRASDSFASESKRQSMEKRKLQIKMSGSYCNTSSDSDGETIRVKKATPISMRKCSGGSKS
PMANAKYKVVRKLKYSQESGSNPGTNLRTSQPLEQQGTHEKENRAEEPSTKKTFKRIRQM
SSPELQDDYLETEVTSKTSGSNSSLIGARPIVSWEANKSPLPSEELSVVFSSNKETQDSK
RKRSPSPSSIDIHAIASNWCADLNLSSEEFDNKNDSVLGVFSSKATKKKKLQIDNSPVSS
SSDSLPILDQTAFYGKPRKGTDSISKSENHDVTDRVVNEKNTITRDCGDEVEEAIEVNKG
SLNNSQSSAKDITSDKDKRNRSNCDLEDARIPSERNENSCGENAISAMSNISVEKNEIAE
NMDSLLQLGDKLNGVITPRGNSTPIKNKSFQNRNPVTFHRHSYNSNKENEAERESENEED
KGKEGTLLRDSSKLTNRTTHEASKVKNIRISNERNDTVESARVDGDVESCQSSFDHDCMN
ITQDHMMLQEVENNLLRPKSIKEREKNSRNNVQKSVDEKATKISPQKKSLVAMDNQKVKA
CTETHSDDSETMGEDIIERTPEKTKALKKDLYDHIENSQRSTVSRRSFMSVDITPIQRKF
QKFMHTATNVSPLVERAGKSSADQHGAAKIARLSFHSTPKSVDPKKNLFARPVLTKPRGA
SESRLCFVCSNLTLPQIENVKAFARLHNADYTVNYKPEVTHVIVKTEEDDSAARTMKYLL
GIAHKKWIVSYQWVTDSSSQNRLLEEEDYEVVDSDTHEPGPRRSRLSKTGLFDEFAFTCM
AATSEIPVSNLQDLVGSSGGTVFQTLEDLATERNKYKVILYDTDTQQPTVLDKWRQKSRA
LPVPLEWVLTCISQYELVSLYSYLPPFTPEVAANLGFPQELLIEDEEDSLSPNETSASNA
A
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatttgaggtggataccgaagtgaagagaatcgcagaagcgattgcatctagt
cgagaaactcttcagtgcacattctgtcgtcaactgccaaatgaggctgtcagcggaaaa
tgcggtcatccaatttgcaaaaattgtgcgagcaagatatgtggaacgagaaaagcgatc
tgccctatctgcaagaccatcttaacaagaagcagtatacgcaaagtaaaggctattgac
gacgctgtgaagtgtctgaaaagactcattgatgcatttgagacagattcgaggactaat
tttttgtcctttaacctaattccaacaaagcaggataaggatccgaagccttcgaccagt
ggaattgttgaacatcactttgtcacaaatcaacctcagagatctcgtaaaagttcagcg
gcagatgggataagaaggcgagcgaccatcgattctggggaaactcttaagataacaagg
agaaactccttacatagaaatgaagatctgacgagtatgtcgaacgagagtaatactact
ttgggaaaagggcatgcctccatggtccatggtctcttagctaaatctgaacctctcgaa
ccgaacgaaaaggttggtctttggttggattcggaggaatttgatgaacagcttgtggtt
gtcggagaaatagaaaaaccagttatccctctggtcccatctattgcaacaactgaggtc
ccagactcagcgtccatagatcgtcccaattcgcgcatgtcactacagagcagtagaaaa
actacatccctaactaaaaagaatcgagcctcgtcgactccaaagaagaaaaaaaatggg
attacttataacaccactcgcgaggaaaacatgtttgatgagttgtgcgggaagaaagta
tctgagcaaccaacgcaaaataggaaagtcaaaattgcctcaagttcggcggatagttca
tggtgtaaattagagcaatttgaacaggaaacaagtgccaaggtcagaaaacgcaaacga
ttgaacatcagtatagaaaaaccaagtacatctaagcaagttgttgggacattggattta
gaatgttctgaagatgatgataaaatcgaggatgctaaaagtagtgaaaatctgatcgat
agcaacaatgtacaaggcaagaataagccacacatcatatctgacagaaagctggagact
gaggaaattttgtatctcccaaaattaaacaaacgccaagtaaaagagataattggcgtt
agttgtacgcagacagactttgacacatccaagaattccagttttagtccagaaaaatct
ccgactaaattgcgtaataatcaaacgtcgctgagaaaatctgataacagtaaccacaac
aacagcaacgattcgttgccactgcagattgaacctgaaaaagatacaacgtcgtgcatc
gaatcaatcgtgagaccgaaatccaggctaagtctttctctttctggcagtcgtccgagt
tctagactttcgcataaaagtcccagtgaatccacagtgaggatattacaacagagaacc
gatgagaaatctccaattcttggcatgagttctgtcagagtttcatttcaccaaaacgac
gaagaaacaaaggaaggaactcagcgaaaccaaagtaattcttctacgggaaaggatcgt
tccataagatcgtgcagcggtttcatgaaaagaaatcttgtgttgaaaagattatcttcc
gaaagcggtaagcataatgtgagcatgctgaagagaggtaaactttacaggtctcgaagt
aacgtcaaatttctacgccttggttcgattatatcgcgaactttgcgaaacgaattaaag
aatattttttgttctggaaaagtgtcgacgtgcgacgtggagacccagacgaattctaga
ctgactcaaacaaatcatatggtatgcagtgtttgtaaaaaacatgttagcagcgaggca
ttggacaatgtgataattcctgaaacacggaccgtctccagtgtctcaagtaaatcaaaa
gcaacgcaaattaaggaagtcggtacgagtgatcctgcaacgcagcgcgcattgatagaa
gaagaattcgacactgtgaacaaggtgaatatgatgtctccaaaagaagattcacagctc
aagtatttgtcaacggagtctcctacggttgacaatactgaacgttctgttaaaaaaaga
cgcagatctcctgatctccaagaatatgctcaagcgatcgaaaattatgcaaacaaattg
atagtaactgattcggaagaccaagataccccgtgccaagaaaaatttcttagcagtaaa
gaaataaatgatcagacacaggaaaaaaaaatttctagcttaggaactacattttctaca
aaaacttctttgctttcgaagattaccgataatcctaattgtttattaaatttaagtaag
tcaagatctccctcgtcacgttcagatactaaatcattacacacgtcgccgaaaagaaga
atacgggcatcggattctttcgcaagtgaatctaagagacaaagtatggagaaacggaaa
ttacagattaaaatgagcggaagttactgcaatacttcttctgattctgacggtgaaaca
attcgagtaaaaaaggcaacgccaataagtatgagaaagtgttcgggaggtagcaaatcc
ccgatggcaaatgccaaatacaaagttgtaagaaaattgaagtatagtcaagaatctggc
tcaaatcctggcactaatttgagaaccagtcaaccgctggaacaacaaggaacacacgag
aaggaaaacagagctgaagaaccatctacgaaaaaaacattcaaaagaatacgtcaaatg
tccagtccagaattacaagatgattatttggaaacagaagtaacatcaaaaaccagcggg
tctaacagctctctaattggtgctaggccaattgtttcttgggaagccaataaaagccca
ctgccgagtgaagaacttagcgtcgttttctcatccaacaaggaaacacaagattctaaa
cgcaagagatctccttccccaagctccatcgacattcatgcgatagcaagtaactggtgc
gcagacctgaatctttcgtcggaagaatttgacaataaaaatgactcagttttgggagta
tttagcagcaaagctacaaagaaaaaaaaattgcagattgataactcgcctgtatcgtcg
agcagtgacagtctaccgatattggaccaaactgcgttttatgggaagcccaggaaaggc
acagattcaatatcaaagtcagagaaccatgatgtgacagatcgagtcgtcaatgagaaa
aatacaatcactcgtgactgtggtgatgaagttgaagaagctatcgaagtgaacaaagga
tctctaaacaatagtcaaagtagcgctaaagatatcacatcagataaagacaagagaaac
aggtcaaattgtgatcttgaagatgccagaattccgtctgaaagaaatgaaaattcttgt
ggtgaaaatgctatttctgccatgtcaaatatttcggtggaaaaaaatgaaattgccgaa
aatatggacagtttgcttcaactcggcgataaattgaatggagtgattacaccaagagga
aattcaacgccgataaagaacaaatcattccaaaatagaaaccctgtaacatttcatcga
cattcgtataattcaaataaagaaaatgaggcggaaagagagtcagagaatgaggaggat
aagggaaaggaaggtactttactcagagactcgagtaaattaacaaaccgcacaactcat
gaagcatcaaaggtgaaaaatataaggatatcaaacgaaagaaatgatacggttgaaagt
gctagggtagatggcgacgtagaatcctgtcaatcgtccttcgatcacgactgtatgaac
ataacgcaagatcacatgatgctccaagaagtcgaaaacaacttactgaggccaaaatct
atcaaggagagagaaaagaacagtcgaaacaatgtgcaaaaaagtgttgatgaaaaagcg
acaaaaatttcgcctcaaaaaaaatcattggtagctatggacaatcaaaaggtcaaagct
tgtactgagacacactctgacgactcggaaactatgggtgaggacataatagaacgtaca
ccagaaaagactaaggcgttaaaaaaggacctttacgaccacattgaaaattcgcaacgg
tcgactgtctcgagaagaagcttcatgtcggtggacataacaccgatacagagaaagttt
caaaaatttatgcataccgctaccaacgtttctcctttagttgaaagagctggcaaatca
tcagccgaccaacacggcgctgccaaaattgcacggctctcgtttcacagtactcctaaa
tcagttgatccaaaaaaaaatctttttgcgcgacccgtcttgacaaaacctaggggcgcg
agcgagagcagattatgctttgtctgcagcaacttgacacttcctcaaattgagaatgtg
aaggcatttgcccgtttgcacaacgcggattataccgtgaactacaaacctgaagtaacc
cacgtaattgtaaaaactgaagaagatgattctgcagcgaggacaatgaaatacctcctt
ggcattgctcacaagaaatggatagtcagttatcagtgggtaacggactcttcgagtcag
aacaggctcctcgaagaggaagattacgaagtggtggacagtgacacgcatgagcctgga
ccacgccgatcgaggttgagtaaaacaggcttgttcgacgagtttgccttcacttgcatg
gcggctacctcagaaattccagtcagcaaccttcaggatcttgtaggtagctcgggcggt
acggtgttccaaactttggaagaccttgccactgaaaggaataagtacaaagttattttg
tacgacactgatactcaacagcccacagtcttagataagtggcggcagaagagtcgagca
ttgccagtgccgctcgaatgggttctgacttgtataagtcagtacgagctggtgtctctc
tactcttacctgcctcccttcacgcctgaggtagcggcgaacttaggatttccacaagag
ctactcatcgaagacgaagaggacagcctcagtccaaatgaaacgtcggcatcgaacgct
gcctaa
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