Neodiprion virginianus: 124304979
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Entry
124304979 CDS
T09046
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124304979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvg03032
]
124304979
Enzymes [BR:
nvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124304979
DNA replication proteins [BR:
nvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
124304979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
POL2_thumb
RPOL_N
Motif
Other DBs
NCBI-GeneID:
124304979
NCBI-ProteinID:
XP_046619805
LinkDB
All DBs
Position
5:15398078..15427527
Genome browser
AA seq
1482 aa
AA seq
DB search
MDEPASLQTGRSRRQKIDKKGRYSALEKLKQLKGSKNKYHVDELANVYEEVDESEYSKKV
QERQIDDWIVDDDGNGYVEDGREIFDDDLDSESIQQASQTKESGPRKKKSNSNKGKGNIR
NMLVGMPSKKETQVKLDDDDILNDLMAELKSGKQDVQPKKTREPNKFLVRPHTKLRTNEK
ITVPPKLQKPLLNVGSASQQIDDNSEDEQLFDIATRSEKSMKKETDLKTTSQFCPSSVSI
SQAIDDDSDIETQNYSCKSSEAPFRTLEKAKPSHTNHIVDSMEEDINHYTDDLSSFDFED
SNQAFTDTSKTTKALQPELKGKTVKPSVTNEDMLSDLWDDDFGEQITEMEISVDNSNLPL
HVNETGEKIFRFYWWDAFEDPYKQPGVVYLFGKVYIETAKAYVSCCIVVKNIDRKIYLLP
REHVKPTDTAEESETKAISMMDVYKEFNEYANKNGIKSFRSCTVTKSYAFEKKGVPKTSE
YLEVKYPAKDPAIASNYSGPTIEQVFGTSVNALELLLIERKIKGPCWLDVKCPLPTNSPV
SWCKVEVNCLKAENISVSISKYSTPPPPLIVATLNVRISFNTKSQQNEIAMIGVLLHNKY
HIDQPSPKPPFVQHFCLITRPEDAGWVMYSKDSLIRRTQTELIHCDKERNLLEELLNRLQ
KADPDLLVGCDCGFQFDVLMHRMFNLRIPNWSRVGRLKRTLPPMYKGKVLIGQVLSGRLL
CDIQTSAKELNLKVRSYDLQSLCTNVLKGKEKDCREIKPEDTAKYYANIDKLVELVRLTM
LDASRIIMIMFELNVMPLALQITCIAGNILSRTLTAGRAERNEYLLLHAFNDKGYITPDK
RNTKADKNNIEKDESNSRKKKAAYAGGLVLEPKKGFYDTLILLMDFNSLYPSIIQEYNIC
FTTVPGAAYSDSTELCIPETCLEPGVIPTEIRKLVESRVQVKNLMKASNISPELRMQYNI
RQLALKLTANSMYGCLGATHCRFYAKGLAALVTAKGREILINTKDLVERLNYQVIYGDTD
SIMINTNVLDYEQVFAIGKQIKQEVNKLYKKVELDIDGVFKYLLLLQKKKYAAVTMTKLP
NGQIETTQEHKGLDIVRRDWCQLACEVGRNVLDQLLCEQPFDARLENIFEILRVVSKSLK
EGNVPLSSLVITKQLSKNPSDYPDKKQAHVNVALRLNEKGGRMWKAGDTVPYIICEDGTD
KSATERAYHVDELKNSETLKIDVNYYLLSQLFPVIMRICDPIDGIDDVLLSEHLGLEGIY
KPKQHFEHEEALPLLDDDKFKYCDHLKFTCQNEMCRTEITMDGAFTNTPTGLTPVLSKCS
NTDCSMAPWQYLPTIQNRLQLAIRAAIDKYYEGWMECEDPACFNKTRRVPQQIFGIHPVC
DFCQKCVMYRIYTETQLYNQISYYHHILDINKPTYKHLGSQLSTDVRNAYNILREFVEKQ
LRSSAYSIVNLTQLFSYLDSNWTKQKGMAGPRFYIEVSQLRR
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacctgcatctctacagacaggacgatcaaggcgtcagaagattgataaaaag
gggcgctattctgctttggagaagctgaaacagttgaaagggagcaagaacaagtatcac
gttgacgagctggccaacgtgtacgaagaagtcgatgagagcgagtacagtaaaaaggtt
caagaacgtcaaatcgatgattggattgttgatgatgatggtaatggatatgtcgaggat
ggtagagagatatttgatgatgatttggacagtgagagtattcagcaagcgtcacagacg
aaggaatctggacctcggaaaaagaagagtaattcaaacaaagggaaaggaaatattagg
aacatgctcgtaggaatgccctctaagaaagagacccaagtgaagctggatgatgatgat
atattgaacgaccttatggcagagttgaaaagtggtaaacaagatgtgcagccaaagaaa
actcgtgaaccaaataaatttttagtcaggcctcacaccaagttacggacaaatgaaaaa
ataacggtgccacccaagttgcagaagccattgcttaatgtgggatccgccagtcagcaa
atagatgataacagtgaagacgaacagctgtttgatatagctaccagaagtgagaagagc
atgaaaaaggaaacggatcttaaaactacatcacagttctgcccatcatccgtcagtata
agtcaagcgattgatgatgacagtgatatcgaaacgcaaaattatagttgtaaaagttca
gaagctccttttcgaactctggaaaaggcaaaacctagtcacacaaatcacatagtcgat
agcatggaagaggacatcaaccattatactgatgatttatcaagtttcgactttgaagat
tcaaatcaagcatttacggacacgtcgaagacaaccaaagccttgcagccagaattaaag
ggaaaaaccgtaaagccatcagttacgaacgaggatatgctgagtgatttatgggatgat
gattttggagaacaaataacggagatggaaatatcggttgataattcaaaccttccttta
cacgtcaatgaaacaggtgaaaaaatatttagattctactggtgggatgccttcgaagat
ccttacaaacaacctggcgtggtctacttgtttggcaaagtttatattgagacagctaag
gcctatgtttcctgttgcattgtggtcaagaatattgacaggaagatctacctcctaccg
agagaacatgtaaaacctacagacactgccgaggaatcggaaacaaaagcgatttcgatg
atggacgtttataaagaatttaacgaatacgcaaacaagaatggcatcaagagtttccgc
tcttgtacagttacaaagagttatgcatttgagaaaaagggtgtacctaaaacatcggaa
tacttggaagttaaatacccagccaaagatcccgctattgcttccaattatagtggacct
acgattgaacaagtgttcggaacatctgtcaatgctctggagctactgctgattgagcga
aaaattaaaggtccttgctggttggatgtcaaatgcccattgcctaccaatagtccagtc
agctggtgtaaagtggaggtcaattgtttgaaggcggaaaacatatcggtatcaataagc
aaatatagcactccaccacctccattgattgtggcaacacttaatgtgcgaatatccttt
aatacaaaatcgcagcagaacgaaattgccatgataggagttcttctgcataataaatat
catattgaccagccatcaccgaagcccccgtttgtacagcatttttgtttgattactaga
ccagaagatgcgggctgggtaatgtattcgaaagattctctaatcagaagaacccaaacg
gaattaattcactgcgacaaagagcgaaacttgcttgaagaactattgaatagactgcaa
aaagcagatccagacttgttagtcggatgtgactgcggatttcagtttgatgttctcatg
cacagaatgttcaacttgagaataccaaactggagcagagttggaaggttgaagcgcact
ctacctcctatgtacaagggcaaagttttgatagggcaagtactgagtggtcggttgctt
tgcgacatccagacgtcagcgaaagaattaaaccttaaagtcaggagttatgatttgcag
tcactttgtacaaatgtcttgaaggggaaagaaaaagattgcagagaaattaagccagag
gataccgcaaagtattatgctaatattgataaactagtggaactggtgagacttacaatg
cttgacgcatcacgcattatcatgataatgttcgaactcaacgtcatgcctctagcacta
cagatcacttgcattgctggaaatattctttcgagaactctgaccgctggccgagccgag
agaaacgagtatcttttgctacacgcttttaatgataaaggctatattacacctgataaa
cgaaacactaaggcagataagaacaacattgaaaaggatgaaagtaattctcgtaaaaag
aaagcagcctatgcaggtggtttggttttggaacctaaaaaaggattttacgacactttg
attttactcatggacttcaattctttgtatccaagtatcatacaagagtataatatatgc
tttaccaccgttcctggagctgcctacagcgacagtacagaactttgtattcctgaaaca
tgtttggagccaggagtcattccaacagaaatccgtaaactagtcgagagccgtgtccaa
gttaagaatcttatgaaggcatccaatatttctcccgaattgcgaatgcagtacaacatt
aggcagttggcccttaaactgactgccaattctatgtatggatgtttaggagcgacacat
tgccgattttacgccaagggattggcagcattggtcacagcaaaagggcgagaaatctta
attaatacaaaagatttagtggagagattgaactatcaagttatctatggtgacactgat
tcgattatgatcaatacaaatgttctagattatgaacaagtgtttgcaattggtaaacaa
atcaaacaggaagtgaacaagctttacaaaaaagtagaattggacattgatggtgtgttc
aagtatctcttgcttttgcaaaagaaaaaatacgctgcagttacaatgactaaactaccc
aatggtcagatagaaacgacgcaggaacacaagggtttagatatagtcaggagagattgg
tgccaattagcctgtgaagtaggaaggaatgtactggaccaattgctgtgtgaacagcca
tttgatgcaaggttagaaaatatatttgaaatcttgcgggttgtttcaaaatcgctgaag
gaaggtaatgttccactttcgtcgcttgttataacaaaacagttatcaaagaatccaagt
gattatccagacaaaaaacaagctcatgtcaatgttgctttacgcttaaatgagaaaggc
ggacgtatgtggaaggctggcgatacagtaccgtacattatttgcgaggacggtacagat
aaatctgcaactgaaagagcgtaccatgttgacgagttgaagaacagcgagactttgaaa
atagatgtcaactactatttacttagccagttattcccagtcataatgcggatttgcgac
cccattgatggcattgacgacgttttgctgtcagagcatttaggtttggaggggatctat
aaaccaaagcagcactttgagcatgaggaggcattaccattgctggatgatgacaaattc
aaatattgtgaccacttgaaattcacatgccaaaatgaaatgtgtcgaacagaaataact
atggatggggcttttacaaatactcccactggtttgacgccagtgctatcaaaatgctcg
aacacagattgctccatggctccgtggcagtacttaccaaccattcaaaatcggcttcaa
ctagccatccgggctgcaatcgacaagtattacgaaggctggatggagtgtgaggatccg
gcatgttttaacaagactcgaagagttcctcaacagatctttgggatacacccagtctgt
gacttttgtcaaaagtgtgtcatgtacagaatttacactgaaacccaattgtacaaccag
atcagttattaccaccatatactagacatcaacaaaccaacatacaaacatttaggatcg
cagctttccactgatgtaaggaatgcgtacaacatacttagggaattcgtggaaaagcaa
ttacgaagcagtgcttattcgattgttaatctgacgcagctgttctcatatcttgattcc
aactggacgaagcagaagggaatggctggaccacgattttacatagaggtctctcaactc
cgacgatga
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integrated database retrieval system
