KEGG   Neodiprion virginianus: 124305002
Entry
124305002         CDS       T09046                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
nvg  Neodiprion virginianus
Pathway
nvg03030  DNA replication
nvg03410  Base excision repair
nvg03420  Nucleotide excision repair
nvg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124305002
   03410 Base excision repair
    124305002
   03420 Nucleotide excision repair
    124305002
   03430 Mismatch repair
    124305002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nvg03032]
    124305002
   03036 Chromosome and associated proteins [BR:nvg03036]
    124305002
   03400 DNA repair and recombination proteins [BR:nvg03400]
    124305002
DNA replication proteins [BR:nvg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124305002
  DNA Replication Termination Factors
   ELG1-RFC complex
    124305002
Chromosome and associated proteins [BR:nvg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124305002
DNA repair and recombination proteins [BR:nvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124305002
  Check point factors
   HRAD17(Rad24)-RFC complex
    124305002
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 RCF1-5-like_lid AAA_lid_RFC1 nSTAND_NTPase5 AAA_16 Mg_chelatase Rad17 AAA_11 Viral_helicase1 RuvB_N AAA_19 nSTAND3 AAA_assoc_2 AAA_24 AAA_18 MeaB ABC_tran AAA_5 IstB_IS21 NTPase_1 DNAX_ATPase_lid MipZ AAA_29 RNA_helicase AAA_28 AAA_23 AAA_25 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 124305002
NCBI-ProteinID: XP_046619856
LinkDB
Position
5:complement(5392172..5412217)
AA seq 350 aa
MAGTDENGEPMDVEVVPSTSGINQKSKSSYRAAHLPWVEKYRPQVFSDIVGNEDTVARLS
VFAQNGNAPNIIIAGPPGVGKTTTILCLARVLLGPAFKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPQGRHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEKIIEPI
QSRCAMLRYGKLSDAQVLAKIIQVCEKENASYTDDGLEAIVFTAQGDMRQALNNLQSTHN
GFGHVNGENVFKVCDEPHPLHVKEMLELCSKGNIDKSFGIMSHLWRMGYSAEDIIGNIFR
VCKNLDIDEKMKLDFIKEIGLTHLGIVNGMNSLLQMQSLLARLCRIALKK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggctggaaccgacgaaaacggcgagccgatggacgttgaggtcgtgccgtcaaccagc
ggcataaatcagaagagtaagtcaagttacagagccgcgcatttgccatgggtggaaaag
tatcgtccccaagtgttttcagacatagtgggcaacgaggacactgttgcacggttgtct
gtttttgcccagaacggtaatgcgccgaatataatcatcgccgggccgcctggagtggga
aagacgacgaccatcctctgtttagctcgggttcttcttggaccagctttcaaggatgct
gttcttgagctcaacgcgtctaacgacagaggaatcgacgtcgtgcgaaacaagatcaag
atgtttgcccaacaaaaggtcacccttcctcaaggcaggcacaagataatcatactcgac
gaagcggacagcatgaccgacggtgctcaacaagccctacgccgaaccatggagatctac
agcaacaccaccagattcgcgctcgcttgtaacaacagcgagaaaatcatcgaacccata
cagtcgcgatgcgctatgttgcggtatggaaaactgtccgatgcccaagtcttagccaaa
atcattcaagtctgcgaaaaggagaatgcgtcttataccgacgatggattggaagcaatt
gtgttcactgcccaaggagacatgagacaagcattgaacaatttgcagtcgactcacaat
ggattcggacatgtgaacggagaaaacgtgttcaaggtttgcgacgaaccgcatcccctt
cacgttaaagaaatgcttgaattatgctcaaagggaaacattgataaatcgtttgggata
atgtcgcatttatggaggatgggatactctgccgaggatattattggaaacatattcaga
gtctgcaaaaatctcgatatagatgagaaaatgaagcttgatttcatcaaggaaatcggt
ttgacgcatttaggcatcgttaatggaatgaacagtctacttcaaatgcagagtcttttg
gcccgtctgtgccgaatagctcttaaaaagtaa

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