Neodiprion virginianus: 124305188
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Entry
124305188 CDS
T09046
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
nvg
Neodiprion virginianus
Pathway
nvg03020
RNA polymerase
nvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124305188
09124 Replication and repair
03420 Nucleotide excision repair
124305188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124305188
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124305188
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124305188
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124305188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
124305188
NCBI-ProteinID:
XP_046620265
LinkDB
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Position
5:22178553..22180147
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AA seq
276 aa
AA seq
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MPYANQPSVHITDLTEENVKFQVEDTELSVANSMRRVFIAETPTMAIDWIQLEANSTVLS
DEFLAHRIGMIPLISDDVVDRILYTRDCQCMDFCPDCSVEFTLDVKCAEDQTRHVTTADL
KSSDPRVLPVTSRHREDDASEYGETDEILIVKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNAMRHTLFPKPDEWPKSEYTELDEDQYEAPFNWEAKPNKYYFNVESSGALK
PENIVMMGIVALKNKLSNLQTQLSHEVQNDALSIHH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgctaatcagccttcggttcatataaccgatctcacagaagagaacgttaaa
tttcaggtagaagacaccgaactaagcgtagccaacagcatgaggcgagtgtttattgcc
gaaactccgacaatggccatagactggatacagctcgaagcgaattcaacagttttaagc
gacgagtttcttgcacataggattggaatgataccattgatcagtgacgatgtggttgac
agaattttatacacaagggactgtcagtgtatggatttctgccctgactgcagtgtcgaa
ttcacactggatgtcaagtgcgcagaggatcaaaccagacatgtgacaacagccgatctg
aaatccagtgaccccagagtgctgccagttacttcgagacacagagaagacgatgcaagc
gaatatggagagacagatgaaatactcatcgtcaaactgcgaaaaggccaggaactaaag
ctgagagcttatgcaaaaaagggatttggaaaagaacacgccaagtggaaccccactgct
ggtgtcagctttgaatatgatccagacaatgcaatgcgtcatacattgtttcccaagccc
gatgagtggccaaagtcggaatatactgagctcgatgaagatcagtatgaagcgccgttc
aactgggaagcgaagcctaacaagtattatttcaatgtcgaaagcagcggtgctctgaag
cccgaaaatattgtcatgatgggtatagttgccctgaaaaacaaattgtctaatctgcag
acacagctgagccacgaagtacaaaacgacgcgcttagcattcatcactaa
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