Neodiprion virginianus: 124305247 Help Entry 124305247         CDS       T09046                                  Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism nvg  Neodiprion virginianus Pathway nvg03040   Spliceosome Brite KEGG Orthology (KO) [BR:nvg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     124305247  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:nvg03041]     124305247 Spliceosome [BR:nvg03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     124305247  Complex C    U5 SnRNP specific factors     124305247 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 HAT_PRP39_N TPR_19 TPR_17 TPR_16 HAT_Syf1_CNRKL1_N Suf TPR_2 HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_8 TPR_11 TPR_1 TPR_15 TPR_6 ARM_TT21_2nd ARM_TT21_N NatA_aux_su TPR_CcmH_CycH ANAPC3 ARM_TT21 Iml2-TPR_39 FAT TPR_9 ChAPs ARM_TT21_5th TPR_MalT Wzy_C_2 TPR_Slam MIT Ribosomal_60s DUF4404 Motif Other DBs NCBI-GeneID:  124305247 NCBI-ProteinID:  XP_046620403 LinkDB All DBs Position 1:complement(26070046..26074163) Genome browser AA seq 931 aa AA seqDB search MAVPSASLSTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT KRAKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK EYREKRLREELERYRQERPKIQQQFSDLKRELVNVSEDEWKNVPEVGDARNRKQRNPRAE KFTPLPDSVLARNLGGDTSTSIDPSNGLASMMPGLATPGMLTPTGDLDLRKIGQARNTLM NVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA WIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPETAKAVIAQSVRHIPT SVRIWIKAADLETEVKAKRRVYRKALEHIPNSVRLWKVAVELEEPEDARILLSRAVECCP TSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRAI SSLNVNGVEINREHWFKEAMEAEKAGAVHCCQVIVKSIIGFGVEEEDRKHTWMEDAETCA QQGALECARAVYAYALATFPSKKSIWLRAAYFEKSYGTRESLEALLQRAVAHCPKSEVLW LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARAS APTPRVMMKSAKLEWALNNLEAALHLLQEAIETFEDFPKLWLMKAQIEEQQGNLDKALET YNQAIKKCPTSVPLWCLLAQLEQRKGQVTKARSVLEKARLRNPKNAELWLEAIRNELKGG GVRDMANTLMAKALQECPTSGLLWAEAIFMEARPQRKTKSVDALKKCEHDPHVLLAVSKL FWCEHKISKCRDWFNRTVKIDPDLGDAWAYFYKFELLNGTEEQQEEVKKRCVAAEPHHGE NWCRVSKNIVNWCLNTDQILTVVSKDLPIPI NT seq 2796 nt NT seq  +upstreamnt  +downstreamnt atggcggtgccatcagcttcgctttcaacgcgaaataaaaagcattttctgggggttcca gcacccttgggctatgtcgctggtgtcggaagaggtgcgacaggtttcacgactcgttct gatatcggtccagctcgcgatgccaacgatgtttctgacgatcgacacgctccacctacc aaaagagctaagaaaaaggaagaagaagaagaggatgaagaagatctcaacgattccaat tatgacgaattctccgggtatggagggtcgctgtttagcaaggatccttatgacaaagat gatgaagaagcagatgcaatttatgaagcgattgataaacgcatggatgaaaagcggaaa gaatatcgtgaaaagcgcctaagagaagaactggaacgttatcgccaagaacggcctaaa atccagcaacagttttcagatctgaagcgtgaactggttaatgtgtctgaggatgaatgg aaaaatgttcccgaagttggcgatgcgcgtaatagaaaacagcggaatccacgagctgaa aagtttacgcctttgccagattctgttttagcaagaaacttgggcggagacacttctact agtatagacccgtctaatggactggcttccatgatgcctggcctggccacacctggtatg ttgaccccaaccggtgacttggatttgcgaaaaattggacaagctcgaaacacgcttatg aatgtgaaactgaatcaagtatcagactctgttgagggtcaaacagttgttgatcccaaa ggttacttaacggatctacaaagtatgattcctacttacggtggcgacatcaatgatata aaaaaggccagattgcttttgaaatccgttcgtgaaacaaatcctaatcatcccccggct tggatagcatctgcccgcttagaggaagttacgggtaaggttcaagcagcaagaaatctt atcatgaagggctgtgaggtgaatccaacttctgaagacttgtggttagaagcagcgagg cttcaacctccggaaacggcaaaggccgtaattgcccagtctgtacgtcacattccaaca tctgttagaatctggatcaaagcagctgacttggaaacggaagttaaggcaaagagacgt gtttatcgaaaagccttagagcatattccgaactcagtacggttgtggaaagtagctgtt gagttggaagaaccagaagatgcaagaattttattgagtcgagcagttgagtgttgtcca acaagtgtcgatttgtggctcgccttggcccgattggaaacttacgataacgcgagaaaa gttcttaataaagctagagaaaatattccaacggatagacagatttggacgactgctgct aaactagaagaagctaatggcaataagcatatggtagaaaagatcattgacagagcaatt agttccttgaacgttaacggagttgaaattaatagagaacactggttcaaagaagctatg gaagctgaaaaagctggtgctgtccattgttgtcaagtcattgtcaagtccatcatcggg tttggagttgaggaagaagataggaaacacacttggatggaagatgcagaaacatgtgca caacaaggtgctttggaatgtgctagagcagtgtatgcttatgctttagcaacttttccc agcaaaaaatcgatctggctgcgtgcagcatattttgaaaagagttacggaacacgggag tccttggaagcgctactccaacgggctgtggctcattgtcctaagagcgaagtcctgtgg ctcatgggtgccaagtctaaatggcttgctggtgacgtgccagcggcaagaggtattttg tcattggctttccaagccaatccaaattctgaagagatttggttagctgcagtcaagctt gagtcagagaactccgaatatgaacgtgccagaagattgttggcaaaagctagagcatca gcgccaactcctagagttatgatgaaaagtgccaagcttgaatgggctcttaataatcta gaagctgcactgcatctcctccaggaagctatagaaacttttgaggattttcccaagctt tggttaatgaaggctcaaatagaagagcaacaagggaatcttgacaaagctctggaaaca tataatcaagctatcaaaaaatgccccacttctgtgccattgtggtgtttgttagctcaa cttgaacagcgtaaaggtcaagtgacaaaggctcgttctgtacttgaaaaagcacggctt cgtaatccgaaaaatgcggagctttggctagaggctattcgaaatgaattgaaaggtgga ggggtgcgagacatggctaatacgttgatggctaaagctctgcaagaatgtcctacgtct ggtctgctgtgggctgaagcaatctttatggaagcacgaccacaacgaaaaacaaagagt gttgatgcgttgaaaaaatgtgaacatgatccccatgttctactagcagtctccaagctt ttttggtgtgagcataaaatatccaagtgcagagattggtttaatcgcaccgttaagata gatcctgatttaggggatgcttgggcgtatttttataaatttgagcttttaaatggcact gaggaacagcaagaggaagtcaaaaagcgatgtgtagccgcagaaccgcatcatggtgaa aattggtgcagagtatctaaaaacattgtaaattggtgtttaaatactgaccaaatattg accgtagtttctaaagacttaccgattcctatctaa

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