Neodiprion virginianus: 124305256
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Entry
124305256 CDS
T09046
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
nvg
Neodiprion virginianus
Pathway
nvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124305256
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nvg01002
]
124305256
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124305256
03036 Chromosome and associated proteins [BR:
nvg03036
]
124305256
Peptidases and inhibitors [BR:
nvg01002
]
Metallo peptidases
Family M1
124305256
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124305256
Coactivators
SAGA/TFTC/STAGA complex
124305256
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124305256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
124305256
NCBI-ProteinID:
XP_046620413
LinkDB
All DBs
Position
5:complement(2522974..2528934)
Genome browser
AA seq
1221 aa
AA seq
DB search
MKKEKTADNSRPYKLAHQILSLTGISFQRKSIIGFVELTIVPLRDTLRLIKLNAKQCRIY
RVCLNDTYEAPFQYFDPFLDICQGDGKQRSLEFYSTHHLAAAQRVDPDNNSGELVIQVPP
DAAHLVGEGRGLRIGIEFSLEQPQGGVHFVLPDCEGNLAERGAHMYTYSYENSSRLWFPC
VDSFAEPCTWKLEFTVDDSMTAVSCGDLVEVVYTPDMRRKTFHYVLNTPACAPNIALAVG
PFEIFVDPYMHEVTHFCLPQLLPSLKVSAKYMHEAFEFYEETLSNRYPYSCYKQVFVDEI
DEDINAYATMSILNTNLLHSTAIIDQVYITKKAMAQAIAEQFFGCFISMQNWSDTWLPKG
ISTYLTGLYAKKCFGNNEYREWVQSELQEVVKYEEQFGGIILDPSQPPAPLPIAANTPAP
VPRVPDPGFYFPIRNLHTMSPKYIEVLRKKAHLVIRMLEHRIGQELLLQVFNKQLSLAAN
AAQQKIDSGLWSHMLISTNVFTKAIFTVTGKDMAVFIDQWVRTGGHAKFSLSFVFNRKRN
TVELEIRQDTTNQRGIRKYVGPLLVNIQELDGTFKHTLQIEGTVAKADITCHSKSRRNKK
KKIPLCTGEEVDMDLSAMDDSPVLWIRLDPEMTLMRAVQIEQPDYQWQYQLRHERDVTAQ
LEAIEALQNHSTPATRLALTDTIENEHCYYKVRCRAAHCLTKVANAMVATWAGPPAMLAI
FRKLFGSASCRRIIKQNNFTNFQHYFLQKTIPVAMAGLRNAHGICPPDVLTFLMDLFKYN
DNSKNRYSDNYYRAALVDALGATVTPVISVQQGTAITAESLSIDTKAILEEVTRNLNLEK
LLPCYKYTVSVACLKVIRILQKFGHLPSNPHLFRAYAAYGQFIDVRLAALEALIDFTRVD
GKWQDMEFLLDMAEMDPHPGVRHRLVRLIVENPPFERAHKHRLDKPDLVDRIWNLINGML
SHDTKLRCDLVDLYYTLYGSKRPLCIPIPELAAITKPRKVGPHISPERDIQPNPVNVNLE
TPPDIEVVLVQNKRKASPSKDLPGPSNNMSSECGPEAKKQKDDKTPGSNEGKVKSEYYSD
NSASLPGIMGTQGPVGFEPGMFKKEQEDHKHKGDSANKGKKKKKDKKKHKHKHKHKHDHK
HGKDKDKKEKDKTKDKDKDKEKDKDKDKDKDKDKEKDKDKDNNKSKDKDSNNLKIKDETL
SSASSSPSPDASTVTLEFVFP
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggaaaaaacggctgataacagccgaccctataaattagctcatcaaattttg
agcttgactggaataagcttccaacggaaaagcataattggtttcgtcgagctgaccatc
gtaccgctcagggacactctacgcctgattaagctaaatgccaagcaatgcagaatctac
cgtgtttgtttaaatgacacttacgaggcgccatttcagtactttgatccatttttggac
atttgtcagggggatggaaaacaacgatccttggaattttattccactcatcatttggcc
gctgctcagcgagtcgacccagataacaactctggtgaattagtcattcaagtaccacca
gatgctgctcatctagtcggagaaggaagaggtctgagaatagggattgagttttcactc
gaacaaccacagggtggggttcattttgtattaccggactgtgaaggaaatttagctgag
agaggggcacacatgtacacgtacagctatgaaaactcatctcgactgtggtttccttgc
gtcgatagctttgccgagccttgtacctggaagctggaattcacagttgatgattcaatg
acggcagtttcttgtggagacttggtagaagttgtatacactccagacatgcggagaaaa
acgtttcactatgttttaaacacccctgcatgtgctccgaacatcgctttagccgttggg
ccatttgaaatatttgtcgatccctacatgcacgaagtcactcacttttgtcttccccaa
cttttaccgtctctcaaagtttcagcaaaatatatgcatgaggcctttgagttttatgaa
gaaactctttcaaataggtatccgtactcgtgctataaacaagtattcgttgacgaaatt
gatgaggatatcaacgcctatgcaacaatgagtattttgaacacaaatttattacactct
acagcgattattgatcaggtttacatcaccaagaaggctatggcgcaggcaattgccgag
cagttctttgggtgctttatttcaatgcagaattggtctgacacctggcttcctaagggg
atttcaacttacctaaccgggctttatgcaaaaaaatgttttggtaacaatgaatatcgt
gaatgggttcaatcggagttgcaagaagtggttaagtatgaggagcagtttggaggaata
atattggacccctcccaaccgccagcccccttgcctattgctgctaacacgccagctccg
gtaccaagggtcccagatccagggttttactttccgatcagaaatctccacaccatgtcg
cctaagtacatcgaggtactacggaagaaggcacacttggtcattagaatgttggagcac
aggatcggacaagaacttcttttgcaggtgttcaacaagcaattatctctggccgccaat
gctgcgcagcagaaaattgactctggcttatggtcgcatatgctgatcagcacaaatgta
tttacaaaggcgatttttacagtcaccggtaaagatatggctgtgttcatcgatcagtgg
gtcagaacaggtggtcatgcgaaattcagccttagcttcgttttcaatagaaaaaggaat
accgtagagttggaaattcgtcaagatacaacaaaccagagaggcataagaaaatacgtt
ggccctttactggtgaacattcaagaactggatggtacttttaaacacacgctacagatt
gaaggcactgtcgctaaagcagatataacttgccacagcaaaagtagacgaaataagaag
aaaaagattcctctctgcactggagaagaggtcgatatggatctgtcagctatggacgat
tcaccagtactctggatccgattagacccggaaatgacgcttatgcgagcggtgcaaatc
gagcaacctgattatcagtggcaatatcaattaagacatgaaagagacgttactgctcaa
ttggaggccatcgaggctcttcaaaatcattctactcctgctactagattagctttgact
gatacgattgaaaacgaacattgttattataaagtcaggtgtcgagccgctcactgcttg
acaaaggtggctaacgcaatggtcgcgacatgggctggtcctccagctatgttggcaatt
tttagaaaattattcggctctgcatcttgtcgaagaattataaagcaaaataacttcact
aatttccagcattattttctacagaagacaatacccgtcgctatggctggcttgcgcaac
gcacatggcatatgcccgccagacgtcttgacttttttgatggacttattcaagtataat
gacaatagtaaaaatcgctactcggacaattattatagagctgctttggttgacgcctta
ggggcgactgttactccagtgatcagcgtgcaacaaggcacggctattactgcagagtcg
ctgtcgatagacacaaaagccattcttgaagaagtaacgaggaatttgaatttagagaaa
ctgctgccatgttacaagtacacggtcagcgtcgcgtgtttgaaggtcataagaatatta
cagaaatttggacatttacctagtaatccgcatttattcagagcttacgctgcatatgga
caatttattgatgttcggttagctgcattggaagcattgatagactttacaagagtagat
ggcaaatggcaggatatggagttcttactcgacatggcagaaatggatcctcaccctggg
gtgcggcacagattagttaggctgattgtggaaaacccaccatttgaaagagcccataaa
catagactggacaaacctgatcttgtcgatcgtatttggaatttgatcaacggcatgctg
tctcacgatacaaagctgaggtgcgacttggttgatctctactataccttgtatggcagt
aaacgacctctctgtataccaattccagagcttgcggccatcaccaaaccgagaaaagtc
ggacctcatattagcccagagcgtgatatacaaccaaacccggtcaatgtgaacctcgaa
actccacctgacattgaggtcgtgcttgttcagaataaaaggaaagcttctccgagtaag
gacctacctggtccgtctaataacatgtcttctgagtgtggccctgaagctaaaaaacaa
aaggatgataaaaccccgggatcaaacgagggtaaagttaaatcggaatactacagtgac
aactctgcatccttgccaggaattatgggcacgcagggccctgttggtttcgagcctggg
atgttcaagaaagaacaggaggaccacaaacataagggagattctgcaaataagggtaag
aagaagaagaaagacaagaagaagcacaaacataaacacaagcataaacatgatcacaag
catggaaaagacaaggataaaaaagagaaggataaaactaaagataaagataaggacaag
gaaaaggacaaggacaaagataaagacaaggataaggacaaagaaaaggataaggacaaa
gataataataaaagcaaggataaggattcaaataatctcaaaattaaagatgagacctta
agttcggctagctcgagtccaagtccagacgcgagtactgttacattagaattcgttttc
ccatga
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integrated database retrieval system
