Neodiprion virginianus: 124305465
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Entry
124305465 CDS
T09046
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124305465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124305465
Spliceosome [BR:
nvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124305465
Complex C
U5 SnRNP specific factors
124305465
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
124305465
NCBI-ProteinID:
XP_046620917
LinkDB
All DBs
Position
5:complement(1817364..1829273)
Genome browser
AA seq
2374 aa
AA seq
DB search
MSIPPYLLGPNPWATMMAQQQAHAQLAAAQAHAQAAAHAQAAHHAHMQAMAGPPLPQLPK
QPEVISEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMSSRK
YRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVY
IAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEED
ESVATWFYEHKPLVGTKHVNGSTYRKWNLSLPQMATLYRLANQLLTDLVDQNFFYLFDPK
SFFTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYN
NMPHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTMEPLLEEDEDFVLP
EEVQPFLQETPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPV
KVRVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGY
NMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSH
VQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPV
GKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHF
DLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILR
YVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYI
SPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQR
EELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAY
LDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKF
EKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIA
QYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLFCRYVDRIHLFLRF
TAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRL
PRSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEIT
KERTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNT
QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLR
WSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNR
RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHD
GKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNA
QRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHL
WQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSR
PSLLADSKDMMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGL
LIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEP
YLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKI
IHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPN
IVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILR
ALHVNTERTKVVLKPDKTTITEPHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVAS
LTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSN
YETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLR
AQIAGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPSSLPNHQYLKEMEPLGWIHTQ
PNELPQLSPQDISTHARVMAENPGWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQN
TDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANP
KEFYHEVHRPAHFLNFSSLEDGDGVGADREDMYA
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgtctataccgccttacttgctgggcccaaacccgtgggccaccatgatggcccagcag
caggcccacgctcagcttgcagctgcgcaagctcacgcgcaagcagcggctcatgctcag
gcagcccatcatgctcacatgcaagcaatggctgggccgccgctaccgcagctgcctaag
cagcccgaagttatttccgaagataaattgcaggaaaaagctcaaaagtggcagcaatta
cagtccaaacgttttgcggagaaacgtaaatttgggttcgtcgatgctcagaaggaggat
atgccacctgagcacataagaaagattattagagatcatggagatatgagcagccgaaaa
tacagacatgacaaacgtgtttatttgggtgctctgaaatacatgcctcatgctgtgatg
aaattgttggaaaacatgccaatgccatgggaacaaattcgggacgtcaaagtgctgtat
catatcaccggagccatcacatttgtcaatgaaattccatgggtcattgaaccagtctat
atcgctcagtggggaacaatgtggatcatgatgaggcgtgagaaacgagacagaagacat
ttcaaaagaatgagatttcctccgttcgatgatgaagaaccgcctctagattatgcagac
aatgtgttggatgtcgagcctttggaagccatacaaatcgagcttgactcggaggaagac
gaatcggttgctacatggttttacgagcacaaacctttggttgggacaaagcatgttaat
ggatcaacttatcgtaagtggaacttgtcccttccacaaatggcaacattatatcgtttg
gccaatcagctgctgactgatttggttgatcaaaatttcttctacctctttgatccaaag
tcgttctttactgcaaaagctttgaacatggccattcctggcggtcctaagtttgagccc
cttgtgaaggattcaaatgctgctgacgaggattggaacgagttcaacgacataaataaa
ataatcatccgacaaccaattcgtacggaatatcgtatcgcttttccttatctgtacaac
aacatgccacacttcgttcatctttcgtggtaccacgctcctaacgttgtctacatcaag
accgaggatccagatttacctgccttttattttgatccattgatcaacccgatttcacac
cgaaattcattgaagacaatggagcctcttcttgaagaagatgaagattttgtactgcct
gaagaggttcagccatttttgcaggagactccgctttatacagacaacacggctaatgga
attgctctgctttgggcaccacgtccgtttaacacgcgatctggcagaactagacgagcg
attgatattcccctggtaaaatcttggtaccgcgaacattgtccaccgggacagccagtc
aaagttcgtgtcagttaccagaaattgctaaagtactttgtcctgaatgcattgaaacac
aggcctccaaagccacagaaaaaacgatacctcttcagatctttcaaatcgaccaagttc
ttccagactacaactatcgactgggtagaagctggtcttcaagtatgcaggcagggatac
aatatgttgaacttgctcattcacagaaagaatttgaactatcttcatcttgattataac
tttaacttgaaaccggtcaagactttgaccaccaaagagagaaagaagtcgcgttttgga
aatgcattccatctctgtcgtgaaatcctccgactgaccaaactgattatcgattctcac
gttcagtaccgtttgaacaacgttgatgcctttcaactcgctgacgggcttcaatacatc
tttgctcatgtcggacaacttactggcatgtatcgctacaagtacaaactgatgaggcag
attagaatgtgcaaagacttgaagcaccttatctattacagatttaacactggtccagta
ggcaaaggtcccggatgtggattctgggcacctggatggagagtgtggctattcttcatg
cgtggtatcacaccgctgctcgaacgctggcttggtaatcttttgtctaggcagttcgag
ggacggcattccaaaggggttgcaaagactgtgaccaaacagcgagtcgagtcgcacttc
gatctcgaattgcgagcctctgtgatgcacgacatcgttgacatgatgcctgaaggtatt
aaacagaacaaagccagaacaattcttcaacatcttagcgaggcttggagatgctggaaa
gctaacattccatggaaggttccagggctgcctattccgatcgaaaatatgattcttcga
tacgttaagatgaaggctgactggtggactaacaccgcacattacaatcgcgaacgtatt
aggcgaggtgctacagtcgataagacagtctgtaaaaagaacttgggacgtctgacaaga
ctctacttgaaggcagagcaggaaaggcaacacaattacttgaaagatggaccatacatc
tctccagaagaagctgttgccatttatacaacgacagttcactggcttgagtctcgtcga
tttgcgccaataccattcccaccattgtcttacaaacacgacacgaaacttttgattctt
gctttggaaagattgaaggaagcctacagcgtcaagtcaaggttaaatcagagccagcga
gaggaactcggattgattgaacaagcctacgacaatcctcatgaggcgttgtcaaggatt
aaacgtcatttattgacgcagagggcgttcaaagaggtcggaatcgagtttatggatctc
tacagtcacctgattcccgtctacgacgttgagccgttggaaaaaatcacggatgcgtac
ctggatcaatatctctggtacgaggcggacaaacgcagacttttcccaccctgggtaaag
ccatctgatacagaaccgcctccacttttggtgtacaagtggtgtcagggtataaacaac
ttgcaggatgtgtgggatgttagtgaaggcgagtgcaacgtcctgcttgagtcgaagttt
gagaaactgtacgaaaaaattgatttaacattgctcaacagactcctcaggctcatcgtt
gatcacaatatcgctgattacatgacagcaaagaacaacgttgtcataaattacaaggac
atgaatcacacgaacagttacggtattataagaggtctgcaattcgcttcgttcatagca
caatactatggcttggtattggacttactcgtgctcggtttgcaaagagcaagcgaaatg
gctgggccaccgcaaatgcccaacgattttctgactttccaagatgtagcttctgaaacg
gctcatccaattcgtttattctgcagatacgtggatagaatccacttgtttctcaggttc
acagcagaagaagccagagatctgatacaacggtacttgaccgaacatccagatccgaac
aacgaaaatatcgtaggttacaacaataagaagtgctggcctagagatgcgagaatgcgc
ttgatgaaacacgacgtaaacctcggtcgagccgtattctgggacataaagaacagattg
cctcggtcgacgaccaccattcagtgggagaatagttttgtgagtgtctacagtaaagac
aatcccaatttgttattcaacatgagtggtttcgagtgtcgcatattaccaaaatgcaga
acgacgcatgaagaattcacgcacagagacggagtttggaatctgcagaatgaaatcact
aaggaaaggacggcacagtgtttcctcagagttgacgatgaaagtcttcagagattccac
aacagagtcagacagatcctcatggcgtctgggtcaactactttcaccaaaatcgtaaac
aaatggaacactgcgctcatcggtctcatgacttacttccgcgaagctgttgtcaatact
caagaacttctggatctacttgtcaagtgcgagaacaaaattcaaaccagaatcaagatc
ggtttgaactctaaaatgccttcgagatttccacctgtcgttttctatactcccaaagaa
cttggaggactcggtatgctgtctatgggacacgttctcattccacagtctgacctgaga
tggtcaaagcaaactgacgttggaattactcatttccgatccggaatgagtcacgacgag
gatcagttgattcccaacttgtacagatacattcagccatgggaatcagagttcattgat
tctcaacgagtgtgggccgagtacgcgttgaagcgtcaagaggcgaatgcgcaaaatcgt
cgtctcactctggaagatcttgaagacagttgggaccgtggtataccaaggataaacaca
ctcttccaaaaggataggcacactcttgcctatgacaaaggatggagaatccgaacagaa
ttcaaacagtaccaggtactcaaacaaaatccgttctggtggacccatcaacgtcacgac
ggtaaattgtggaacttgaacaactaccgaactgatatgatccaagcgcttggaggagtc
gaaggtatccttgagcatactctgttcaaaggaacgtatttccctacctgggaaggtctg
ttttgggagaaggcatcaggatttgaagagtcgatgaagtacaaaaaattgacaaacgca
cagagatctggtttaaatcaaattccgaaccgtcgttttactttgtggtggtcgccgacc
atcaacagagccaacgtttacgttggattccaggtgcaactggatctgactggaattttc
atgcacggaaaaattcccacgctaaaaatatccctgattcaaatcttccgtgcccatttg
tggcaaaaggttcacgaatctatcgtcatggatctgtgtcaagtgtttgatcaagaatta
gatgctctcgagattgaaactgtacaaaaggaaactatccacccgagaaagtcttacaag
atgaactcgtcttgcgccgatatcttgctcttctctgcgtacaagtggaatgtgtccagg
ccatctttgctagcagattcaaaagacatgatggacaataccacaacccaaaaatattgg
attgatgtccaattgaggtggggtgactacgattctcatgacattgaacgatacgcaagg
gcgaagtttttggactatacaacagacaacatgtcgatttatccttctccaacagggctg
cttatcgccattgatttggcttacaacctgcacagcgcatatggtaactggttcccgggc
tgtaagcctcttatccagcaagcgatggcaaagataatgaaagccaaccctgcgctttat
gtactaagagagcgcatcaggaaggctcttcaactctactcttcagaaccaacagagcct
tacctatcgtcacaaaattacggagagctgttctcaaatcagattatttggtttgtcgat
gatacaaacgtctaccgagtaacgattcacaagacttttgaaggtaatttgactacgaaa
cctatcaacggtgccatctttatcttcaaccctcgcactggacagcttttcctcaaaatt
attcacacctcggtttgggctggtcaaaagcgtctcggacagctggcgaaatggaaaact
gccgaggaagttgcggcgttgattcggtctcttcccgttgaagagcaacctaaacaaatt
atcgtaaccagaaaaggaatgttggatcctctcgaggttcatttactcgacttccctaac
atcgttatcaaaggttcggagttgcaacttccgttccaagcctgtcttaaggtagaaaag
tttggtgaccttattctgaaggctacggaacctcaaatggttctcttcaatctctatgac
gattggctgaaaacaatttcttcgtacacggcattttcacgtctgatcctgattctgcga
gcattacatgtcaacacagaaagaacaaaagttgttctcaagcctgacaaaacgactatc
acagagccgcatcatatttggccatcacttaccgatgacgagtggatcaaggtggaagtg
cagttgaaggatttgattttggctgactatggaaagaaaaacaacgtcaatgttgcatcg
ctaacacagtctgaaattcgtgacattattcttggaatggagatcagcgctccgtcggct
cagagacaacagattgccgagattgaaaaacagactaaagagcaatcgcagctcactgca
acaaccactagaacagtcaacaaacatggtgacgaaattatcaccgccactacttcaaac
tatgaaactcagacgttcagttcaaaaacggaatggcgagtgagagctatttcggccacc
aatcttcacctcagaactaaccacatatacgtttcgtctgacgatatcaaggaaaccggg
tacacttatatactgccaaagaatgttctcaagaaatttgtcaccatctctgacttacgc
gcgcagatcgcagggtatctgtacggcattagtcctccggacaatcctcaggtgaaggag
atacggtgtatagtaatggccccacaatggggtacacatcaaactgtgcatcttccaagt
tctttgccaaaccatcaatatctcaaagagatggaaccgcttggatggatacacactcag
ccgaatgaactgcctcaattatctccacaagacatatcaacgcacgccagagttatggcc
gaaaatcctggatgggacggagagaaaacaattgtcattacatgcagtttcacccctggt
tcatgttccctcacggcatacaaactcactcctagtggatttgaatgggggaaacaaaac
acggacaagggaaacaatcccaaaggatatcttccaagtcactacgaaaaagtacaaatg
ctgctttctgatcgtttcctgggcttctttatggttcctagtcagggttcttggaactac
aacttcatgggcgtgagacacgacccgaatatgaagtacgaactgcaattagcaaatccg
aaagaattttaccacgaggttcaccgacccgcccatttcttaaatttctcaagcttggaa
gatggcgacggcgttggagcggatagggaagacatgtacgcgtaa
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integrated database retrieval system
