Neodiprion virginianus: 124305473
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Entry
124305473 CDS
T09046
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
nvg
Neodiprion virginianus
Pathway
nvg03022
Basal transcription factors
nvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124305473
09124 Replication and repair
03420 Nucleotide excision repair
124305473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124305473
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124305473
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124305473
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124305473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-UDP
TRAF3_RING
zf-RING_2
zf-P11
zf-C3HC4_2
zf-RING_4
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
124305473
NCBI-ProteinID:
XP_046620930
LinkDB
All DBs
Position
5:1846794..1848590
Genome browser
AA seq
321 aa
AA seq
DB search
MDDQICPRCKTTKYRNPSLKLMVNVCGHALCESCVDLLFLKGSGACPECQIPLRRTNFRV
QLFEDSMVEKEVDIRKRILRDFNKKEEDFTTLREYNDYLEEIETIIYNLANNIDVIETNK
RIEQYKKANKEQILKSKSKLGREEYELEELLELEKQQEEERKLELIKQEAEMKKKKIREK
EALIDELMFSEADAANIVETFASTIQATREEAKVVPVAKVTQFSTGIKFGRQGQQTFMPV
PKVEEGPTYCYKRIEQEVEGPHPPGWQEMESGGYIAHVRSEKPAEKAGGFKSSIACLRAL
QEAMAGLYHNPSQRPPESMAI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaaatttgtccccgttgtaaaacgaccaagtacagaaatccgtcgttgaag
ttgatggtaaacgtgtgtggacacgcgttatgcgaaagttgcgtcgatctcttgtttttg
aagggctctggcgcttgtcccgaatgtcaaataccgttgcgaagaacaaatttcagggtc
caattgttcgaggactcgatggtagaaaaagaggtagacatccgcaagagaatactccgc
gacttcaacaaaaaagaggaggactttacaacgctgcgagagtacaacgattacctcgag
gaaattgaaacgataatatacaacctggccaacaacatcgacgtaatagagacgaacaag
aggatagagcagtacaagaaggcgaacaaggaacaaattttgaaaagcaagtccaagctg
ggcagggaggaatacgagcttgaggaattgttagagctggaaaagcagcaggaggaggag
cggaaactggagttgataaagcaggaggctgaaatgaagaagaaaaaaatacgtgagaaa
gaggctctcatcgacgagctaatgttctcagaagcggacgccgcgaacattgtcgagacg
ttcgcgtctacgatccaggcgaccagagaggaagctaaggtcgtgccggtcgcaaaagta
acccaattcagtaccggaataaaattcggcagacagggtcagcagacattcatgcctgta
ccgaaagtcgaggaaggtcctacctactgctacaagcgtatcgagcaggaagtcgaaggt
ccgcatcctcctggctggcaggaaatggaatctggcggatatatcgcgcacgtcagaagc
gaaaagccggcagaaaaagccggaggctttaaatcgagcattgcgtgtttgagagcgctt
caggaagcgatggctgggctgtaccacaatccctcgcaaagacctcctgagtcgatggca
atctga
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integrated database retrieval system
