Neodiprion virginianus: 124305484
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Entry
124305484 CDS
T09046
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
nvg
Neodiprion virginianus
Pathway
nvg03030
DNA replication
nvg03420
Nucleotide excision repair
nvg03430
Mismatch repair
nvg03440
Homologous recombination
nvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124305484
03420 Nucleotide excision repair
124305484
03430 Mismatch repair
124305484
03440 Homologous recombination
124305484
03460 Fanconi anemia pathway
124305484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvg03000
]
124305484
03032 DNA replication proteins [BR:
nvg03032
]
124305484
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124305484
Transcription factors [BR:
nvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124305484
DNA replication proteins [BR:
nvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124305484
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124305484
MMR (mismatch excision repair)
124305484
DSBR (double strand breaks repair)
HR (homologous recombination)
124305484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
zf-like
T2SSC
Motif
Other DBs
NCBI-GeneID:
124305484
NCBI-ProteinID:
XP_046620955
LinkDB
All DBs
Position
5:2103288..2108812
Genome browser
AA seq
607 aa
AA seq
DB search
MYELSEGALDQIMNGVEVEKPILQILGHKKLQSASTQERYRLLVSDGKRINSYAMLATQL
NSLITNDQLTEFSVCQVNRYAISMINNSGTQKRVMVILNIDVKVPGTEVGCKIGNPTQQD
GNVQNGDSTPAARLAAPVPKTNNSSNSVRPGRQQQSYLNDSVSSGAGISTTPIEALSPYQ
NRWVIRARVANKSAIKTWSNARGEGSLFSMDLVDETGEIRCTAFRDQCDKFYNMIEFGKI
YYISRCQLKPANKQFSNLKNEYEMTMTSETEVVPCHDDSDEIPTVKYDFAPISEIDGKEP
NAIIDVLGVCKSCSDITTVVARTTRKELKKRDVNLVDESNTMVTLTLWGTQADEFDGSSN
PVVAVKGARLAEFNGGKSLSTLNSSVLQIDPDIPEAHRLRGWYNTTGCTENVHTISKGLG
GGSGGMNGPWLTFKEAKDMQLGCRETPDYFIVKATINMIRTENSLYKACPTDDCKKKLID
QSNEMYRCEKCNRNYPNFKYRLLASINLADWTDNQWVTAFNEEAEKILGMTAQEIGELKD
NDDEAFLEKFGESAFKTFLLKLRVKMENYSDENRLKSTVVNVTPLDIKSYNNHLIAQIKE
LSNMGKA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaacttagtgaaggagccttggaccaaatcatgaacggtgtcgaggtcgaaaag
ccgattttacagatattgggacacaaaaagctgcaatcggcgagcactcaggagcgctat
cgcctcctagtttcagatggcaaaagaattaactcatacgcgatgttggctacacagcta
aactcgctgattaccaacgaccaactgacagagttttccgtgtgccaagttaatcgatac
gcaattagtatgatcaacaattcaggaacacagaagagagtgatggtcatactcaacatt
gacgttaaggttccgggcactgaagtgggctgcaaaataggaaatcctacccagcaagac
ggcaatgtacagaacggagattctactcctgctgcccgattagcagcgcctgtaccaaaa
actaataattcctcaaattctgttcgtcctggaagacagcagcaatcttatcttaatgat
tcagtatcctctggtgctggtatctcaactacaccgatagaagccctgagtccttatcaa
aacaggtgggtaatcagagctagagtagccaataagtcagctataaaaacgtggagcaat
gcacgtggcgaaggttccctcttttctatggatttagtcgatgagactggcgagattcgc
tgcactgcattcagagatcaatgtgacaaattttacaacatgatcgagtttggcaaaatt
tactacatttcacgttgtcaactgaagccagcgaacaagcaattcagtaatttgaaaaat
gaatacgagatgacaatgacatccgaaacagaggttgttccttgtcacgacgattctgac
gagatcccaacagtgaagtacgattttgcaccaatcagtgaaattgatgggaaggagccg
aatgcaataattgatgtgcttggcgtttgcaaatcttgtagtgatatcacaactgtagtt
gcgaggactacaagaaaagagcttaagaagagggatgtcaatcttgttgacgaaagcaat
acaatggttactctcacattatggggaacccaggcggacgagtttgatggatcttctaat
cctgttgttgccgtgaaaggtgcacgtcttgccgaatttaatggtggaaaatctctgtct
acccttaactcgtcagtgctccagattgacccagacattcccgaagctcataggctccgt
ggttggtacaacacaactggatgcacagagaatgtgcataccatttctaaggggttgggc
ggtggcagtgggggaatgaatggtccgtggttgacgttcaaggaggctaaagacatgcag
ctgggctgcagagaaactcccgactacttcatcgtcaaggcaactatcaatatgataagg
accgaaaactctctttacaaagcgtgcccgaccgatgactgtaaaaaaaaacttatcgat
cagtccaatgaaatgtatcgttgtgaaaagtgtaacaggaactatccaaacttcaaatat
cgactgctggccagtatcaatctcgcagactggacagacaaccaatgggtaaccgcgttc
aatgaggaggctgaaaagattttgggaatgacggcacaagaaattggtgaattgaaggat
aatgatgatgaagcgtttcttgaaaagttcggtgaatctgctttcaaaactttccttctc
aaattgagagtaaaaatggaaaactatagcgatgagaacagattgaagtccaccgtagtg
aatgtgacgccgctggatattaaaagctacaacaatcatctgatcgcgcaaattaaagaa
ctttccaacatgggcaaggcataa
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