Neodiprion virginianus: 124305656
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Entry
124305656 CDS
T09046
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvg03036
]
124305656
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124305656
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
eIF-5_eIF-2B
Motif
Other DBs
NCBI-GeneID:
124305656
NCBI-ProteinID:
XP_046621220
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Position
5:complement(4152714..4164772)
Genome browser
AA seq
1303 aa
AA seq
DB search
MNHRSTTDGRMMHRRGGKRIRMDDPVPPEYEAPMTPMTPMTPMTPLHETASNELQESYSS
YASYQAPQTPIHNPTPEHYSPDSYSSPGTSHQQQQQYVEQTTSFEPAAQFEQPMTPLAPA
NMRITRNTRARLRGSTVQQPKYKEIDTDFIPTVAPRGRGGGGRGRGRRVPHSNNLEDEAS
LYYIIKNNRSSLTTIVDDWIEKYKIDRGNALLMLMQFFINASGCKGRITSEMQTTMEHVA
IIRKMTEEFDEESGEYPLILPGQQWKKFRSNFCEFVQILVRQCQYSIIYDQFLMDNVISL
LTGLSDSQVRAFRHTATLAAMKLMTALVDVALTVSINLDNTQRQYEAERQKAREKRAADR
LESLMAKRKELEENMDEIKNMLTYMFKSVFVHRYRDTLPEIRAHCMAEIGVWMKKFHQNF
LDDSYLKYIGWTLHDKVGEVRLKCLQALQPLYASEELKLKLELFTSKFKDRIVAMTLDKE
YDVAVQAVKLVISILKHHREILTDKDCEHVYELVYSSHRAVAQAAGEFLNERLFVPDEEA
VAGVKTKRGKKRLPNTPLIRDLVLFFIESELHEHGAYLVDSLIETNQMMKDWECMTDLLL
EEAGPEEEALDNQKETSLIELMVCCIKQAATGEAPVGRGPTRKNMSAKELKQVQDDKQRL
TEHFIQTLPLLLDKYRADPEKLANLLAIPQYFDLDIYTKSRQEQNLESLLKKIHTIVEKI
NDTEVLDTAAKTLEHMCIERHAIYTSCDLARSTLIDMIVNKYKEAIDEYRSLIEGGDVPN
EDEIFETIQSLKKVAIFYSCHNMNPWGIWDSLYKDIEGARDPARCLPHEAVKYCISACFF
AILWGQNHLLEAVDSGSKRGEDECCELKKRLHILMDQMCYLVGGDGNAVVVPPILREEAY
NSICDLLVMFCNQLSTHHNPLMHHLVYETDQNMQNMLNKFIQEYVFCEEEDDEHDEHSKI
EELHKRRNFLAGYCKLIVYNMMPTKAAADVFKHYVKYYNDYGDIIKTTLGKARDINKTNC
ALTMQHSLNILYNEIVAEKGKVSRNSEEFTAIKELAKRFALSFGLDAVKNRDAIAALHRA
GVLFAITPPDGVELDPTGPPPNLAFLEILSEFTNKLLKQDKRVVLNFLDKRLQAGMPSSR
GEDWQPLLLYRNSLLHGETDQVPVTSKRAYTRRKKDLLAEEEEADEADDNSDHEFMGKFK
KKRGPRKNQLSVNKTSMPKSSRSSTLYDSSNESPAQPMSPSCGLNIDDVSSIPSHEIDGR
LKSLQIQSKSRRSVDISGPRELRRTARNSGRYIEGQYMESDSE
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcggtcgacaacagacggcaggatgatgcacaggcgggggggaaagcggatt
cggatggatgatcccgtccctccggagtacgaggctcccatgacccccatgactccgatg
accccaatgacacctttgcacgaaactgccagtaatgaacttcaggaatcttattcatcg
tatgcatcataccaagcgccacaaactcctatacacaaccccacccccgaacattactcg
ccggacagctacagctcaccaggtacctcacatcaacagcaacaacagtatgtggaacaa
acgactagttttgaaccagctgcacagtttgagcagccaatgacacctctggcaccagct
aacatgaggatcacaaggaatacacgcgccagattacgtggtagcacagttcaacagcca
aaatataaagaaattgatacggactttatacccactgtcgcccctagaggtcgtggtgga
ggtggacgaggtcgtggtcgacgggttccacattctaacaatcttgaagacgaagccagt
ctttactacattatcaaaaacaatcgttcttcccttaccactatagttgacgactggatt
gagaagtacaaaatcgatagaggaaatgccctcctcatgcttatgcaattttttattaat
gcgagtggctgtaaaggacgtattacatccgaaatgcagactactatggagcatgtagct
ataattcgtaaaatgacggaagaatttgatgaggaaagtggagagtatccattgatcttg
cctggacagcaatggaagaagttccgatcaaatttttgtgaatttgttcaaattctggtt
cgccaatgccaatattccataatctacgaccaattccttatggacaatgttatttctttg
cttactgggttgtcagattcccaagtcagagctttcagacacactgcaaccttagctgca
atgaagctcatgactgcccttgtagacgttgctctaactgtatcgataaatctcgacaat
acacagcgtcagtatgaagccgaaaggcagaaggcaagagaaaagcgagcagctgacaga
ttggagtcactaatggcgaaaagaaaggaacttgaagaaaacatggatgagattaagaac
atgctgacatacatgtttaagtctgtgttcgttcatcgttaccgagatactttaccagag
attcgagcgcattgtatggctgaaattggtgtatggatgaaaaaatttcaccagaacttt
cttgatgattcgtatttgaaatacataggatggacgctacacgataaagttggcgaagtt
agactcaagtgtttgcaagcgttgcagccgttgtatgcctcggaagaattgaaactcaaa
ctggagctatttactagcaaattcaaggatcgaattgttgcaatgacgttggacaaagag
tacgatgttgcggtccaagcagtgaagcttgttatatctatattgaaacatcacagagaa
atattgacagacaaggactgtgagcatgtctatgagctggtttactcatcgcatagagct
gtcgcgcaggctgctggagaattcctcaacgaacgactctttgtaccggacgaagaagca
gtcgcaggtgtaaagacgaaacggggtaaaaaaagacttccaaacacacccctgatcaga
gatctcgttctatttttcattgaatctgagctccacgaacatggcgcgtatctagtcgac
tcgttgatcgagactaaccaaatgatgaaagactgggaatgcatgactgatttattgctt
gaggaagcaggaccggaggaagaagcacttgataatcagaaagaaacttctctgatcgag
ttgatggtttgttgcataaaacaagctgccacaggtgaagcaccggttggcaggggtcca
acgcgtaagaatatgtccgcaaaagaattgaaacaggttcaagatgacaagcaacgactt
acggaacactttattcagactttacctttgctcttggataaatatagagccgacccagaa
aaattagcaaatttacttgcgatacctcaatactttgatctcgacatatacactaaatca
agacaggagcaaaaccttgagtcactgttgaaaaaaattcacaccattgttgagaaaata
aatgacaccgaagtgttggacacagcagccaaaactttggaacatatgtgcatcgagcgt
catgcaatatacactagctgtgacctggcccgatcaaccttgatcgacatgatagtgaac
aaatataaagaggctatcgacgaatacagatcattgatagagggaggagacgttccaaat
gaagatgaaatatttgagactattcaatccctcaaaaaagtagcgatattctacagttgt
cataatatgaatccatgggggatttgggactcattgtacaaagatattgaaggtgcaagg
gatcctgcaaggtgtttaccgcacgaagcagtaaaatattgtatcagtgcttgctttttc
gcaattttgtggggacaaaatcatctattagaagcagttgactcgggaagcaaacgaggg
gaagacgaatgctgcgaattgaagaaacgtttacacattctgatggatcagatgtgttat
ttggttgggggcgatggcaatgcagtggttgtacccccaattctgagagaagaagcttac
aattcaatttgcgacttgttggttatgttttgtaaccaattgagcacgcatcataatcct
ttgatgcatcatttggtttatgaaactgatcagaatatgcagaacatgttgaataaattc
atacaagagtatgttttctgtgaggaggaggatgatgaacacgacgaacactcaaagatt
gaagaattacataaaaggagaaattttttggctggatactgtaaactgatcgtttataat
atgatgcccacaaaagctgctgctgacgtttttaagcattatgtcaagtactacaatgat
tatggtgatataataaaaactactctcggcaaggcaagggatataaataaaacaaattgt
gctctaacaatgcagcacagtttgaacattctctacaatgaaatagtcgcagaaaaagga
aaagtaagcagaaacagcgaagagtttactgctataaaggaattagctaagcggtttgcc
ttgtcttttggcttggatgcagtgaaaaaccgtgatgcaattgcagctctacacagagcg
ggtgttttatttgctataacacctccagacggagtagaattggacccaactggacctcct
cccaatctggctttcttagaaatattgtctgaatttacaaataaacttctgaagcaagac
aaacgcgttgtgttgaactttctcgacaagcgattacaagctggcatgccatcatcgaga
ggagaggattggcaaccattgttattgtacagaaatagcttattacatggtgaaactgat
caagttccagtcacaagtaaacgtgcctacacaagacgcaagaaagatctcctcgctgaa
gaagaggaagctgacgaggctgacgacaattccgaccacgagttcatgggcaaattcaag
aagaaacgtggccctcggaaaaatcagctatcagtgaacaagacatcgatgccgaaatcg
agcagatcatcaactctttacgatagtagcaacgaatcaccagcgcagccaatgtctcct
tcgtgtggactcaacatagacgacgtgtcgagtattccatcgcacgaaattgatggaaga
ctaaagtcactccaaatccagtctaagtcaagacgtagtgtagacatatcagggccaaga
gaattacgcagaactgcaagaaactccggaagatatatcgaagggcaatatatggaatct
gattccgaatga
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