Neodiprion virginianus: 124305818
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Entry
124305818 CDS
T09046
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124305818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124305818
03009 Ribosome biogenesis [BR:
nvg03009
]
124305818
Enzymes [BR:
nvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124305818
Spliceosome [BR:
nvg03041
]
Complex A
U1 snRNP components
U1 related factors
124305818
Complex B
124305818
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
124305818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
124305818
NCBI-ProteinID:
XP_046621646
EnsemblRapid:
ENSNVRG00000014749
LinkDB
All DBs
Position
5:complement(28122701..28128986)
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AA seq
572 aa
AA seq
DB search
MINNRIFVTRRTIDVAAAVLGFLPTTYGGSTSGYRSGGGRGGGGGGQRNGYGGGGGGGSS
SSGRFGSRGGGGGGSSRGGGGGRGGSSLRKPNWDYENLKPFKKDFYVPHSNVSSRLPREV
EIYRGDKQITLKGDSIPNPIQYFEEGNFPDYVMQGIRKQGFAEPTAIQAQGWPIAMSGRN
MVGIAQTGSGKTLGYVLPAIVHINNQQPLNHGDGPIALILAPTRELAQQIQTVATEFGSL
SYVRSTCIFGGAPKGGQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRM
LDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTDYTQLNIGSLTLSANHNI
LQIIDVCQEHEKETKLGSLLQEIGNVNDDGGKTIIFVETKKKVENITRNIRRYGWPAVCM
HGDKSQQERDYVLREFRNKKGSILVATDVAARGLDVDDVRYVINFDYPSSSEDYIHRIGR
TGRSQSTGTSYAFFTPQNGRQAKDLVNVLQEANQVINPKLSELASRSGGGGGGGYGGRNR
WGYGGGRGRENNYSGGSKRFDTGRSNGYNNYN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatcaataaccggattttcgtcactcgacggacaatcgatgttgctgctgctgttctt
ggcttcttgccgacgacctacggtggatcaactagtggataccgtagtggaggtggtcgc
ggaggaggtggcgggggtcagagaaatggttatggtggtggcggcggaggtgggagcagt
agcagtggtcgttttggcagcagaggaggaggtggaggtggcagcagccgtggaggcggt
ggaggtcgaggaggcagcagtctgaggaaaccaaactgggactatgagaacctgaaacca
ttcaaaaaagacttctatgttccccactctaacgtatccagccggctgcctcgcgaggtg
gaaatttacagaggagacaagcagatcaccctcaagggcgacagcattccaaaccccatt
cagtatttcgaggaggggaattttcctgactatgtaatgcagggaattagaaagcaggga
tttgcagaaccaacagcaattcaggctcagggatggcccattgccatgtctggacgcaac
atggtcggcatcgctcaaaccggatcaggaaaaactctaggttacgttctcccagccatt
gttcatatcaacaatcagcagcctctgaatcacggtgatggacccatcgctctgatcctt
gcaccgaccagagaactcgcgcagcaaattcagacggttgcgacagaattcggctctctt
tcctatgtcagaagcacgtgcatatttggtggagcacctaagggaggccaggctcgagac
ctggagcgaggggtcgaaatttgcattgccactcctggtcgcctgatagattttcttgaa
aggggcactactaatttacgcagatgcacgtacttggtattagacgaagctgacagaatg
cttgatatgggatttgaacctcaaatcagaaaaatcattgagcagatcagacctgacagg
caagtactgatgtggtctgcaacttggccaaaagaagttcgcaaccttgctgaagagtat
ttaactgactacacgcaactgaatatcggctcgctcacactttctgcgaaccacaacatt
ctgcagattatcgatgtttgccaagagcatgaaaaagaaaccaaattgggaagcctgctg
caagaaattggaaacgttaacgacgatggcggaaagacaattatatttgttgagactaaa
aaaaaggttgagaacatcacaagaaacatccgcagatacgggtggccagcagtatgcatg
catggcgacaaatcgcagcaagagcgtgattacgttctcagagaatttagaaacaagaag
ggttcaatccttgtagcgacagatgttgctgcgcgtggcctggatgtggatgacgtaagg
tacgtgatcaatttcgactacccgtcatcgtcagaagactacattcacagaatcggtaga
acgggccggtcgcaaagtacaggaacaagctacgctttcttcaccccacagaatggcaga
caagccaaggacttggtcaatgtacttcaagaagctaatcaggttatcaatcccaaacta
agtgagttggcttcgcgaagtggtggcggcggcggcggaggctacggaggcagaaatcgt
tggggatatggaggcggacgtggacgagaaaataattattctggcggtagcaagcggttc
gatacgggccgcagcaacggttataacaattacaattga
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