Neodiprion virginianus: 124305962
Help
Entry
124305962 CDS
T09046
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvg03000
]
124305962
03036 Chromosome and associated proteins [BR:
nvg03036
]
124305962
Transcription factors [BR:
nvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
124305962
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
124305962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
bPH_3
Motif
Other DBs
NCBI-GeneID:
124305962
NCBI-ProteinID:
XP_046621989
LinkDB
All DBs
Position
5:8544283..8550929
Genome browser
AA seq
757 aa
AA seq
DB search
MDFLEYSDITAEVKGVMTPGKLKLTDQHLIFKNQKTGKVEQISGSDMEMVNYQKFVGTWG
LRIFLKNGTLHRFRGFKDGDQEKIAKFFTSNYQKDMLEKELSLKGWNWGTAKFNGSVLSF
DVGHHTAFEIPLYYVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPISDSAEQDPVEGF
HQQVMSKASVISVSGDAIAIFREIHCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLR
LFLLPHKDSRQMFFVVSLDPPIKQGQTRYHYLVLLFSQEDETSIELPFTEKELEQKYHDK
LTKELSGPTYEVLGKVMKAISVRKLTGPGGFVGHSGTPAVGCSFKAAAGYLYPLERGFIY
VHKPPIHIRFEEIASVNFARGGGSTRSFDFEIELTSGVTHTFSNIEKEEYAKLFDFITSK
KLRVKNRGKTDKPKYNDDFGNSDQEDEPDAYLARIKAEVEERSDDNQESEESTDEDFNPN
QDESDVAEEYDSNVSASDSDADSDASGGSGKKEKKEKKEKKEKKHKSAKTVSEKPRKSRK
PKKEKDENKPKRPSTAFMLWLNNTREEIKAKNPGIAVTEIAKKGGEMWRELKDKSEWEQK
AAKAKEDYAVAMKDYEASGGAAGTKAKESGKEKSDKQKKESKKEVSPSKLMTGGAFKSKE
YISDEESSSGSGDDSEDKKGSSKKKKSDESEDEKKKVSEDESDSAKKTKKRGNKRPAETD
GKKTKKGKKDLSDAEGSDEEFDEPEESTPATSDAESE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctcgagtattctgatattaccgccgaggtaaaaggcgtcatgactccagga
aagttgaagttgactgaccaacatttgatattcaaaaatcagaaaacaggaaaggttgag
caaatttctggttctgatatggaaatggtcaattaccagaaatttgttggaacctggggc
cttcgaatattcctaaaaaatggaacgttacatagatttcgaggcttcaaagatggggac
caagaaaaaatagccaaattttttacttcaaactatcaaaaggatatgttggaaaaggaa
ctcagtttgaagggttggaactggggaactgcaaaattcaatggttcagtgctaagcttt
gatgttggacatcacactgcgtttgaaattcctttgtattacgtttcacaatgtaataca
ggaaaaaacgaagttactctagagtttcatcagaacgatgatgcgccggtaagtctaatg
gaaatgaggttccatattcctataagtgacagtgccgaacaagatcctgtcgaaggattc
catcagcaagtgatgagcaaagcgtcggtcatcagtgtcagtggagatgcgatcgctatc
ttcagagaaattcattgccttacgcctcgtggtcgttacgacatcaagatattccagtct
ttctttcaacttcacggtaaaacattcgactacaagatccctatgtctactgtgctcaga
ttgttcttactgcctcataaagacagtaggcaaatgttttttgttgtcagtttagatccg
cccatcaaacaggggcagacacgttatcattatttggtactgttgttcagtcaagaagat
gaaacgtctattgaattgccattcacagagaaagagttggaacaaaaatatcacgacaaa
ttaactaaagagttatctggtccaacttatgaggttcttggcaaagtaatgaaagctata
agtgtcagaaaacttaccggacctggtggctttgttgggcactcaggaactcctgcagtt
ggttgttcgttcaaagctgcagctggttacttgtatccattggaaagaggtttcatatac
gttcataaaccaccaattcacatacgtttcgaagaaattgcttcggtcaatttcgcacgt
ggcggtggatcaacgagatcatttgattttgaaattgaattaacgagtggcgttactcac
acctttagcaacattgaaaaagaggaatatgccaaactctttgactttatcacatccaag
aaactgcgagtgaagaacaggggcaaaactgacaaaccgaagtacaatgacgactttggc
aacagcgatcaagaggatgagcctgatgcttatttggcaagaatcaaagcagaggtagaa
gagagaagtgatgataatcaagagtctgaggagtcaaccgatgaagatttcaatcctaac
caggatgaaagtgacgttgctgaggaatatgatagcaacgtgagtgcatctgacagcgat
gcagattcagatgcttcaggtggaagtggaaaaaaagagaaaaaagaaaagaaagagaag
aaagaaaagaagcacaagtctgctaagactgtttctgaaaagccacgaaaatcacgtaaa
ccaaagaaggagaaagatgagaataagcccaagcgaccgtccactgctttcatgttatgg
ttgaataatactcgagaggagatcaaagcgaaaaatcctggaattgctgtgactgaaatc
gcaaagaaaggtggtgaaatgtggcgagaactaaaagataaatctgaatgggaacaaaaa
gcagctaaggctaaggaagattatgcagtagctatgaaagattatgaggccagcggcggt
gccgcgggcacgaaggctaaagaaagtggtaaagaaaaatcagacaagcaaaagaaagaa
agtaagaaagaagtctctcctagtaaacttatgacaggtggcgctttcaagagcaaagaa
tatatcagtgacgaggaaagcagtagcggtagcggtgatgattctgaagataaaaagggt
tcatcaaagaaaaagaaatccgatgaaagtgaagatgaaaaaaagaaagtctctgaggat
gaaagtgattcggcgaagaaaacgaaaaagagaggaaataaaagacctgctgaaaccgat
gggaaaaagacgaaaaaggggaagaaagatttatcagacgctgaaggtagcgatgaagag
ttcgatgaacccgaagaaagtacccctgcaacaagtgacgcagaatcggagtag
DBGET
integrated database retrieval system