Neodiprion virginianus: 124306284
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Entry
124306284 CDS
T09046
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
nvg
Neodiprion virginianus
Pathway
nvg03430
Mismatch repair
nvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124306284
03460 Fanconi anemia pathway
124306284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124306284
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124306284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124306284
NCBI-ProteinID:
XP_046622766
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Position
5:complement(23924612..23956049)
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AA seq
824 aa
AA seq
DB search
MSRPAKIRKLDETVVNRIAAGEVIQRPANALKELIENSLDAKASSIQVTVKEGGLKILQI
QDNGTGIRKEDMDIVCERFTTSKLQQFEDLKSIATFGFRGEALASISHVAQLTITTKVAD
DPCAYKASYIDSKLKAPPKPCAGSQGTTILIENLFYNVPTRRRALKSPAEELSRITEVVN
KYAIHNSNVGFVLRKHGDIVPQVRTQHNSTKVANIQTIFGVAVARELLEVEHTDDTYKFK
LCGLVTNANYSNKNFTLLLFINNRLVESTPIKKMLEDLYSVYLPRKAHPWCYISLEINPA
NIDVNVHPTKHEVRFLHEEAIIGKVKDAVDAQLLGNNASRTFYAQARLPQVDITKQALEE
VIPEYSNAGNKEKPVHAYQMIRTDSSDQKLEKFNFTVNTSSANQSLNESKEVKSTIVTES
KEDGQPKRLNPTKYAAEKAPNESSFFDSLLEDCLPHQTSTQVENLAKPSTSYAPLDGNTK
AQDVSEIENDEVEKAVSGGDSTTDEALKRVFQYLGNRDNIDYVKTIVEPGSSQDLADRHD
GSKTKKTDSQITSPSKNATAETTSGSKPKRPEFKSYSVNATRREVKLTSVLKLRKNVEDN
YHEGLRDILSNMIFVGCVDETFALIQSGLNLYICNTPKLLEELFYEIMLYDFENYGVMQF
SEPVSLSDLAMLGLETEEAGWTEEDGEKEELANSVKELLLEKADMMNEYFSIIIDKKGML
KSLPILLDKYFPSKAGMPLYVLRLATEVDWTAEQSCFDGICRETAKYFSYVSRNNENPEW
QNVTEHILYPAIKNSLLPPKHFAHDSTILQIARLPDLYRVFERC
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggccggctaaaataagaaagctagatgaaactgtggtgaacagaatagccgcc
ggggaagttattcagcgaccagcaaacgctctgaaagaactgatcgaaaacagcctcgac
gccaaggccagcagtattcaagtcacagtcaaagaaggcgggttgaaaatacttcagatt
caggacaatggaacggggatcaggaaagaggacatggacattgtctgcgaacgatttact
accagcaaactacagcaattcgaagacctcaaatcaatcgccacctttggcttcaggggt
gaagctcttgccagtatcagtcacgtagctcagctgacgatcacaacgaaagtcgccgac
gacccctgtgcgtacaaggcctcgtacatagacagtaaattgaaagcacctccaaaacct
tgcgctggtagccaaggtacgacaatattgatcgaaaatctgttttacaacgtccctact
agacggagagcattgaaaagtccagccgaggagctttccaggataacagaagtcgtgaat
aaatatgcaattcataattctaacgttggttttgttctgagaaaacatggagacatcgtt
cctcaggtacgaactcagcacaattctacaaaggttgccaatatccaaacgatattcggt
gttgctgtggcgagggagttgctggaggtcgagcacaccgacgatacgtacaaattcaaa
ctatgcggtctagtaacgaacgcgaattactcaaacaaaaactttacacttctgttgttc
atcaacaacaggcttgtcgaatctaccccaataaaaaaaatgttagaggatctctactcg
gtttatttgccgagaaaggcccacccctggtgctacatatctcttgagataaatccggct
aatatcgacgtgaacgtgcatcctacgaagcacgaggttcgttttctccatgaagaggct
ataataggaaaagtgaaagacgccgtggacgcacaactgctcgggaacaacgcatcgcga
actttttacgcccaagcgagattgcctcaagttgacattacgaaacaagcgctggaagaa
gtaattccagagtacagcaatgccgggaacaaagaaaagccagtccacgcttaccaaatg
atcagaacagattcctccgatcaaaaactggagaagttcaatttcacagtcaacacatcc
agcgccaaccaatcgctcaatgaatccaaggaggtaaaaagcacgattgttacggaaagt
aaggaagacggacaaccgaagcgattaaatccgacgaaatatgctgcggaaaaggccccc
aacgaatcgagttttttcgacagtttgttagaggattgcttaccgcatcaaacctctacg
caagttgaaaatcttgctaaaccttcaaccagttacgcgcccctcgacggtaacacaaaa
gctcaggacgtctcggagatcgaaaatgacgaggttgaaaaagccgtcagtggcggcgat
tctaccaccgatgaggcacttaagagggtttttcagtacctgggtaatcgggataacata
gattacgtaaagacaatcgtcgagccaggaagtagccaggatttagctgatcgacatgac
ggttccaaaacgaagaagactgattcgcaaatcacgtcgccgagtaaaaatgcaacggct
gaaacaacgtccggcagcaagccgaagagaccagagttcaaatcttactcggtaaatgcg
acaaggcgagaggtgaagctcacgagcgtgttgaaacttcggaaaaatgtcgaagacaac
taccacgaagggctgagggacatattgtcgaatatgatttttgttggctgcgttgacgaa
acttttgccctcatacagagcggactcaatctgtacatatgcaacaccccgaagttattg
gaagaacttttctacgaaataatgctgtacgactttgagaattacggtgttatgcaattc
tcggagcccgtctcactgtccgacctcgctatgctaggactcgaaaccgaggaagccggg
tggacagaagaagacggcgagaaagaggaattggcgaatagcgtgaaagaattattgctg
gaaaaggcagatatgatgaacgagtacttttcgattataattgacaaaaaggggatgttg
aagtccctgcctatactgctggacaagtactttccaagcaaggctggaatgccattgtac
gtgttgcgtttggcgacggaagtcgactggaccgcggaacaatcttgtttcgatggaata
tgcagagaaacggccaagtacttcagctatgtaagtcgaaataatgaaaatccggagtgg
caaaacgtcacggagcatatcttataccctgccataaaaaacagcctcctaccgccaaaa
cacttcgcccacgattccactatcttgcaaatagcaaggctgcccgatttgtatagagtc
tttgaaaggtgctga
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