Neodiprion virginianus: 124306421
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Entry
124306421 CDS
T09046
Name
(RefSeq) protein retinal degeneration B isoform X1
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124306421
Membrane trafficking [BR:
nvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124306421
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IP_trans
LNS2_PITM1-3
PITM1-3
DDHD
Acid_phosphat_B
LNS2
Transthyretin
Motif
Other DBs
NCBI-GeneID:
124306421
NCBI-ProteinID:
XP_046623069
LinkDB
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Position
5:complement(874900..903647)
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AA seq
1270 aa
AA seq
DB search
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESKGVGSGVEILVNEPYTNGPGGNGQYTR
KIYHVGSHLPAWFKSLLPKSVLTTEEEAWNAYPYTKTRYTCPFVEKFSIEIETYYYSDNG
YQENVFKLSGSDLRNRIVDVIDLVKDQLYGEYVKEEDPKLYVSEKTGRGPLTDSWLEEYW
ADVKGKSQPTPSGKSLMCAYKICRVEFRYWGMQTKLEKFIHDHALRKTMVRAHRQAWAWQ
DEWYGLTMEDIREIERQTQLALQRTMGAGESGEDAADDDQLDGTGNVSSSQDKDVAKTLA
ATLGSIEKNEDPQSPAYLRKQSDIPVINTAMSSEGELSPEDSPTESSAPRLIDERSDVKK
TWKRSNPSLHSPSSAKSFDIQVANWRMESIVRESESGSEDEFFDCQAGFIIPTIHKEDFG
DNSSLAKWSSLDLLAEEDDTVSPTAVTSNKQEDTIFSHSYLQRVASERSNKRLYIRSSAS
IDVSCPASPQHSPTNQPCRTTVLLIVLHAGSVLDANVDLTAKKSDITTFRGAFESVMRQH
YPSMVGHIAIKFVSCPSICTEVLCILSSLSPYSFDVSPSCTDAPQVTHDTIPIGSIPLLA
TCSPDYQDSVSRVVSGSNQVYQEFIKSEEGRGFNGQICFVADSVGSILGYDTLCRSLQYQ
SRHDSENSILENDNQVGEDNDGNEDGKHLSAPSPRRRSSSTSDNFNHCKLDFEVGEFFMF
GSPLSLVLAYRKISSTGDKNSNIPRPLVNQVYNLFHPTDPVAARLEPLISARFSLLPPVN
VARYQKYPLGNGQPYHLLEAVQTNPQLFVDGLNVPNTPMPHMRRMSEISLQSTMSGVVDN
IPLQAITALTQKWWGNKRIDYALYCPEGLANFPTNVLPHLFHASYWESSDVIAFILRQLG
RFDLPMLGNEEKELTCFRPGQPREKWNKKRTSVKLKNAAANHRANDVIVREGAPQVLIAR
FMYGFLDMIALTGEKVDIHVMKDAPAGEWTFLSTEVTDKTGRVAYKIPDEKALGYGIYPV
KMVVRGDHTSLDFFMAVIPPKTECVVFSIDGSFTASMSVTGRDPKVRAGAVDIVRHWQEL
GYLIIYITGRPDMQQQKVVSWLSQHNFPHGLVSFAEGLSTDPLRHKAAYLNTLIQEHGVI
IHMAYGSNKDISVYTAINLKPNQIFIVGKVSKKHQAFATILYEGYAAHLSALTAVGGSRP
AQGNARMVIPRGQFGLPGQNASLRRRRSAKRAVSHPLMGDVCVLERSTSVGPPPASQVPQ
LKRTMTQDKL
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgttgataaaagaatatcggatacctctgcctttgacggtggaggaatatcgcatagct
caactttacatgatagcgaaaaaatcacgcgaagaaagtaaaggcgtgggcagcggcgtt
gagattcttgtcaacgaaccttataccaacggtccaggtggcaacggacaatatactcga
aaaatataccatgtcggtagccatttgccagcttggttcaaaagtcttttaccaaaatcg
gttctcacgacggaagaagaagcttggaacgcttatccttacacaaagacacgctacact
tgtccgttcgttgagaaattctctatagagatagagacctactattattcggacaacgga
tatcaggagaatgttttcaaactctccggcagcgatttgagaaacagaatcgtggacgtc
atcgacttggtcaaggatcagttgtacggcgaatatgtgaaagaagaggacccaaagttg
tacgtgtcggaaaagacgggtcgcggaccgcttacagattcatggctggaagaatactgg
gcggatgtgaagggaaagtcgcagccaacaccttccggcaaatcgctgatgtgcgcctac
aaaatatgcagagtggaatttcgttattggggaatgcaaactaagttggaaaaattcatc
cacgatcacgcgcttcgaaaaacaatggttcgcgctcatcgtcaagcgtgggcttggcag
gacgaatggtacggtttaaccatggaggacataagagaaattgagaggcagacgcaactg
gcgctacagcgtacaatgggggctggcgagtcgggagaagatgcggcggacgacgatcag
ctggatggaacgggcaacgtatcctcgtctcaagacaaagatgtcgccaagactcttgcc
gctaccttgggaagcatagagaaaaacgaggacccccagagtccggcttacctcagaaag
caatcagacattccagttatcaatacagccatgagttcggaaggtgaattaagccccgag
gactcgccgacggaatcatctgctccccgactcatcgacgaaaggagcgacgtcaaaaag
acatggaagaggagtaacccgtcgcttcattcgccgagttcagctaaaagttttgacata
caagtagcgaattggcgcatggagagtatcgtcagagagtcggaatccggtagcgaagat
gaattctttgattgtcaagctgggttcataatacctactatccacaaagaggactttgga
gataattcgtcattagctaaatggagttctttggatcttctagctgaagaggacgacacg
gtttctccgactgccgtgacaagcaataagcaagaagacacaatattttcacattcgtac
ttgcaacgcgtggcaagcgaaaggagcaataagcggttgtacattaggtcttcggctagc
atcgacgtgtcctgcccagcctcgccccaacattctccaacgaatcagccgtgcagaact
accgttctgctcattgtcttacatgccggaagtgttctagatgccaatgtcgacttgacg
gcgaaaaagtcggacatcactacctttagaggggcctttgaatccgtcatgaggcaacat
tatcccagtatggttggacacattgcgattaagtttgtttcctgtccctccatatgcaca
gaagttctctgtattttgtcgagcttgagcccttacagttttgacgtttctccgtcttgc
accgacgctccgcaggtgacgcacgacacaattcctatcggatctattccattgctcgca
acttgtagtccggattatcaggattcggtgtcaagagttgtgagtggctcgaatcaagta
tatcaagaatttatcaagagcgaagagggacgtggattcaacgggcaaatatgcttcgtc
gccgattcggttggttcgatattaggatacgacaccctctgccgatctttgcaatatcag
tctaggcacgacagtgagaatagcattttagaaaatgacaatcaagtaggcgaagataac
gacggaaacgaggatggtaaacatttgtcggctccctctccgagaagaaggtcttcctcg
acaagcgataatttcaaccactgcaaattagactttgaggtcggtgaattctttatgttt
ggaagtcccttgtctctcgtcctagcgtatagaaagatatcatctaccggagacaaaaat
agtaacattcctaggccactggtaaatcaggtttacaacttatttcatccgaccgaccca
gtcgccgctcgtttagaacctttgatttctgcaaggttttcacttctccctccagttaac
gttgctcgatatcagaagtacccgcttggaaacgggcaaccgtatcatctgctggaggct
gtgcagaccaatccgcaattgtttgtcgatggtttgaacgtgccaaacacccctatgcct
catatgcgaagaatgtccgagatatctctgcagagtacgatgtccggagtcgtggataac
atcccgttgcaagcgataacagccctgacgcagaagtggtgggggaataagagaatcgac
tatgctctgtactgtcccgaaggtttggccaactttcctacaaacgtgttacctcaccta
tttcacgccagttattgggaatcttcggacgtaatcgcttttatattaagacagttgggg
aggttcgatttaccgatgctaggcaacgaagaaaaagaactcacatgcttccgtccaggg
cagcccagagagaaatggaataaaaaacgaacgtccgttaaacttaagaatgctgctgcc
aatcatagagcaaatgatgttatagtgagagaaggtgctcctcaagtactaatagcgagg
tttatgtacggcttcttagatatgatagctttaacaggagaaaaagtagacatacatgta
atgaaagacgcgccggcgggcgagtggacttttttgtctaccgaagtaacggacaaaact
ggtcgagtcgcgtacaaaattcccgacgagaaagcactgggctatggaatatatcctgtg
aaaatggttgttcgcggtgatcatacttcattagactttttcatggctgtgataccacca
aagacggaatgcgttgtattcagtatcgacggctctttcactgctagcatgtccgtgacg
ggtagagatccgaaagtcagagcaggcgccgttgatatagtaagacattggcaagaactg
ggatacctgattatctatatcaccggacgacccgacatgcaacagcaaaaggtagtttcc
tggctttcgcagcataatttccctcacggcttggtatcctttgccgaaggtttgtcgacc
gatcctcttcgacacaaggctgcgtatttaaacacgctgattcaggaacacggcgtgatc
attcacatggcttacggaagtaacaaggacataagcgtatacacggcaataaatttgaaa
ccgaatcaaatattcattgttggaaaagtttcaaagaaacatcaagcattcgctaccata
ctctacgaaggctatgccgctcacttaagcgctctgaccgcggtcggaggttccagaccg
gcgcaaggcaatgctcgaatggtaataccgaggggtcagtttggtctaccgggacagaat
gcctcgttacgccgtcgaagatcagcaaaacgtgcagtgtcgcatccgttgatgggtgat
gtgtgcgtcttggaaagaagcacaagcgtcggaccaccgccagcttcgcaagtgccgcaa
ctgaaaagaacgatgacccaggacaagctctga
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