Neodiprion virginianus: 124306453
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Entry
124306453 CDS
T09046
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
nvg
Neodiprion virginianus
Pathway
nvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124306453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124306453
03036 Chromosome and associated proteins [BR:
nvg03036
]
124306453
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124306453
Coactivators
SAGA/TFTC/STAGA complex
124306453
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124306453
STAGA complex
124306453
TFTC complex
124306453
SAGA complex
124306453
SLIK complex
124306453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
124306453
NCBI-ProteinID:
XP_046623157
LinkDB
All DBs
Position
5:complement(20854730..20860986)
Genome browser
AA seq
628 aa
AA seq
DB search
MNDNDSIYGTTLSQESMKVIAESIGVGNLPDEAAKDLAEDVSYRLKEIIQDAAKFMHHSK
RQRMTAHDIDHALKIKNIEPTYGFFARENVPFRFASGGGRELHFVEDKEIDLNEAVSNSQ
SWPKLPLEVTLRAHWLCIDGVQPTIPENPPPVSKDAQKVESVDPTSKLTAKGQSVGIGKP
GGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEALQSLSADPG
LHEMLARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHELIPSVATC
IVSRQLCMRPEMDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNSQVNQ
FGTPLASLYGAIEGLSELGPEVVKALIIPKIKSISERIESCIEGPVLSSIDKNGAGHIKT
LLVKVVAPVLKGMRPAPDYVEEYKQDFGYVGPVLCAAVAKARIQPATLTTSATASTTLTT
NQQQGPTTVVTKPLVQSVPAGSPGQQAPSRTMILGSGRGGTTPTGGCQKFVILQSRSQTP
TMPNVVQTPGQQQQQQQVKITQNSSSHQQKQHLQGSTPKLVVVCMPSSNQNATTTVSQAS
LTSKPQTVFVTQQSIERSLSPTDEHAFQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaacgattcgatatacgggacgaccctgtcccaggagtccatgaaagtgatc
gcagaaagcattggggtcggaaatcttcctgacgaggctgccaaggatctcgccgaggat
gtaagctacaggctaaaggagatcattcaggatgcagcaaaattcatgcaccacagtaag
cgtcagaggatgactgcacatgacatcgaccatgcattaaagataaagaacatcgagccg
acatatggcttctttgcacgagaaaacgtccccttcagattcgcatcgggaggaggtaga
gaattgcactttgtggaggacaaggagatagacttgaacgaagcagtgtccaacagccag
tcgtggcctaagctaccgctcgaagtaacgttgcgagcccattggctttgcattgatggc
gtccagcctacaatcccagaaaatccacctcctgtatccaaggacgcgcaaaaggttgag
agtgttgatccgacaagcaagctcactgccaagggtcagagtgtcggcattggtaagccg
ggaggaggaggaaagagtcaaaagttgagaaacgttgagacggtgcatgtaaagcagctc
gctacccacgagcttagtgttgagcagcagctctactacaaggagataactgaggcctgc
gttggatcggacgaggctcgtagagctgaggccctgcaatctttgtctgcggatcctggt
ttgcatgaaatgcttgccagaatgtgcaccttcatcgccgaaggcgtcagggtcaatgtg
gtgcaaaacaatctcgcacttctcatttacctcatgagaatggtcaaagcccttctcgac
aatcccagcctttatctagagaaatacctgcacgagctgataccgtcagtagcgacgtgc
atagtctctcggcagctgtgcatgagacctgaaatggacaatcattgggcgctgagagat
tttgcatcacgcctgatggcccagatctgcaagaacttcaacacgtcgacgaacaatgtg
cagaccagagttactcgcatgtttagtcaggcgctggctaagaatagtcaggtaaatcaa
ttcgggacgcccttggcctcgctctacggggcgatcgaaggactctctgagctcggccca
gaggtggtcaaggcgctgatcattccaaagataaaatccatatctgagaggatcgagagc
tgcattgaggggcccgtactttccagtattgataaaaacggtgctggtcatatcaagacg
ctgttagttaaagttgtcgctcctgtgttgaaaggcatgcgtccggctccggattacgtt
gaagagtacaaacaagactttggatacgtcggtccagtgctttgtgccgctgttgctaaa
gctcgaatccaacctgcgactcttaccacctccgcaacggcctccaccactctcaccaca
aaccagcaacagggaccaaccactgtggtgacaaaaccgctcgttcaatcagtgcccgcg
ggtagcccaggtcagcaggctcctagcagaacgatgatactgggttccggcaggggtgga
acaacgccgacgggcggctgtcagaagttcgtcatacttcagtcgagatcgcagacaccg
acgatgccgaacgtcgtacaaacaccaggccaacagcagcaacagcagcaggtcaagata
acgcaaaatagttctagtcatcaacaaaagcaacatctccagggtagcaccccaaaactg
gtggtggtttgcatgcctagtagtaaccagaacgccacgaccactgtgtctcaggccagt
cttacttctaaaccacagacagtctttgttactcaacaaagcatcgaaagatctctgagc
cccaccgacgagcacgcttttcaatag
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