Neodiprion virginianus: 124306455
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Entry
124306455 CDS
T09046
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124306455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvg04147
]
124306455
Membrane trafficking [BR:
nvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124306455
Exosome [BR:
nvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124306455
Exosomal proteins of bladder cancer cells
124306455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
GATase
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
124306455
NCBI-ProteinID:
XP_046623164
LinkDB
All DBs
Position
5:35089672..35098512
Genome browser
AA seq
1215 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILVSLHNGIIQLWDYRMCTLLDKFDEHDGPVRGICFH
NQQPLFVSGGDDYKIKVWNYKQRRCIFTLLGHLDYIRTTMFHHEYPWILSASDDQTIRIW
NWQSRTCICVLTGHNHYVMCAQFHPSEDIIVSASLDQTVRVWDISGLRKKSVAPGPGGLE
DHLKNPGATDLFGQADAVVKHVLEGHDRGVNWACFHPTLPLIASGADDRQIKMWRMNDAK
AWEVDTCRGHYYNVSCVLFHPRQELILSNSEDKSIRVWDMTKRACLHTFRREHERFWVLA
AHPTLNLFAAGHDSGMTIFKLERERPAYAVYGNLLFYVKDRFLRKLDFNTSKDSSVMQIR
GGGKVPAYSMSYNQAENAVLICTRSALNVENSTYDLYMIPKDGDSNSDPDAKRASGVTAI
WVARNRFAVLDRGYSLVIKNLKNEVTKKVQIPNCDEIFYAGTGMLLLRDAEQVILFDVQQ
KRTLAEVKISKCRYVVWSNDMSHVALLAKHTVNICNRRLESICSIHENTRVKSGSWDDSG
IFIYTTSNHIKYAINNGDHGIIRTLDLPIYVTRVKGNQVFCLDRECRPRILNIDPTEYKF
KLALINRKYEEVLHMVRTANLVGQSIIAYLQQKGYPEVALHFVKDEKTRFGLALECGNIE
VALEAARTLDQKSCWESLAQAALLQGNHQVVEMCYQRTKNFEKLAFLYLITGNLDKLRKM
TKIAEIRKDVSGQYQGSLLLGDIYERAKILKNSGQTSLAYVTEKIHGIASEEDDLQYESM
KEELEDLERGAVYLQPPIPTQQAENNWPLLTVSKGFFEGAMMSRGKTQVAAALAPEDDSG
PVEGWGNDDELGMDDEEGGDTEIVGDTEEGAGWDVGDEDLELPPELEAATPSSEDGYYSP
PTKGIPPTQHWVNNSQLVSDHILAGSFESAFRLLHDQVGVVEFQAYESIFLSTFARARTS
YSSLPSIPSLYGYPQRNWKEANVKNGLPAVGLRLTDLVQRLQVCYQLTTGGKFTEAVEKL
QHILLSVPLLVVDTRQDIAESQQLIQICREYILGLKMETTRKTLPKSTLAEQKRLCEMAA
YFTHCNLQPVHQILTLRTAVNMFFKLKNYKTAASFARRLLELGPRAEVAQQARKILQACD
KNPVDEHQLLYDEHNPFTLCAGTYTPIYRGKPEIKCSLCGASYQPQFKETICTVCEVALV
GKETIGLRISPLQFR
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaagttcgaaacgaaatccgcccgcgtcaagggcttgtcttttcatcctaag
aggccctggatccttgttagtttacataatggcattatccaactctgggactaccgcatg
tgcaccctgctggataagttcgacgagcacgacggtccagtccgaggtatctgcttccac
aatcagcaaccactgttcgtctcaggtggtgatgactacaagatcaaagtatggaactac
aaacagcgccgctgcatattcaccctcttgggtcacctcgattacataagaacaacaatg
ttccatcatgaatatccatggattctcagcgcatctgacgaccagacgatacggatttgg
aattggcagagtagaacgtgtatatgcgtattaacaggtcataaccactatgtgatgtgt
gcgcaattccacccttcggaggacattatcgtctcggcatctctcgaccagacggtaaga
gtctgggacatttccggattgcgtaagaaaagcgtagccccgggaccgggcgggctagaa
gatcatttgaagaaccctggagcgacagatttgtttgggcaagctgatgccgttgtaaaa
catgtccttgaggggcacgatcgcggcgtaaactgggcatgctttcacccgaccttaccg
ctaatcgcttcaggggcggatgatcgtcaaattaaaatgtggcgaatgaatgatgccaaa
gcttgggaagtcgacacttgcagaggccactactacaacgtatcttgtgtactcttccat
ccgcggcaagaattgattctgtcaaactccgaagacaagagtattcgggtctgggacatg
accaagcgagcctgccttcacaccttcaggagagaacatgaacgattttgggttctggcc
gcgcacccaactctcaacttattcgcggctggacatgattccggaatgactattttcaag
ctcgaaagagagcgtccggcttatgccgtctacggcaatctgttgttctatgtcaaagac
cgttttcttaggaaattagatttcaacacatcgaaggatagctcggtaatgcagatccgt
gggggtggcaaggtgccggcttacagtatgtcctacaaccaggctgaaaatgctgttctg
atctgtacgaggtctgcgctgaacgttgaaaacagtacttatgacttgtacatgattcct
aaggatggtgactccaatagcgaccccgatgctaagagagcctcaggcgtgacagcgata
tgggtagcaagaaacagatttgcagtcctggatagggggtattctttggtgattaaaaac
ctcaaaaacgaggtgacaaaaaaggtgcaaattccaaattgcgacgagattttttatgct
ggaacggggatgctcttgttaagggacgctgaacaagtcatactctttgatgttcaacag
aagagaacactagcagaagtgaagatctcgaagtgtcgttacgtcgtatggtcaaacgat
atgtcacatgttgcactattagctaagcacacggtgaacatctgtaatcgtcgtttggaa
tcaatatgttcgattcacgagaataccagagtgaaatctggttcctgggatgactctgga
atatttatttatactacgagtaatcacataaaatacgctattaacaatggcgatcacgga
attattcgtactctagacttaccaatctacgttactcgcgtaaaaggaaaccaagtattt
tgtctagatcgcgaatgcaggccgagaatattgaatatcgaccccacagagtacaaattt
aaattagcattgataaacagaaagtacgaagaagtcttgcacatggttcgtacagcgaat
ttggttggtcaatcgataatcgcctatctacagcagaaagggtatccagaagttgctctc
cactttgtgaaagatgagaaaaccagatttggacttgccttggagtgcggtaacattgag
gtcgccctagaggcggcaagaactttggatcagaagagttgttgggaaagcttagctcaa
gcagctctacttcagggcaatcatcaggttgtagagatgtgttaccagagaacaaagaac
ttcgaaaagcttgcatttttgtacttgattactgggaatttggacaaattaagaaagatg
acaaaaatagcagaaattaggaaagatgtttctggtcaataccaaggaagtttacttttg
ggagatatttatgaaagagcaaaaatattgaagaactctggtcagacgtcactcgcgtat
gtaacagaaaaaattcacggaatcgctagtgaggaggacgacttgcagtatgaatcaatg
aaagaagaattggaggacctcgaacggggagcagtatatctccagcctccaattcctact
caacaagctgagaacaattggccattattgacagtttccaaaggtttcttcgagggtgca
atgatgtctcgtggtaagactcaagtagccgctgctctggcaccagaagatgactctggg
ccggttgaaggatggggtaatgacgacgagttgggcatggatgacgaagagggtggagat
acggaaattgtaggcgataccgaagaaggggctggctgggacgttggcgatgaagatcta
gaattgccaccagaattagaggcagcgacaccatcttctgaagacggctactattctcca
ccaacaaaaggaattcccccaacccaacactgggtcaataattctcagctggtatctgac
cacatcttagctggttcctttgaatctgccttcagattactacacgatcaagttggagtc
gtcgagtttcaagcttatgagtcaatatttttgagtacatttgcacgagcacgcacctca
tactcaagccttcccagtataccatcactttacggctatccacaaagaaattggaaagag
gcgaacgtcaaaaacggcttaccagctgttggcttgagattgactgatcttgtgcagaga
ttacaagtctgctaccagttgaccacaggtggaaaattcactgaagcagttgaaaaacta
caacacattttgctcagtgttccacttctggttgttgatacaagacaagatattgcagaa
tctcaacagctaatacaaatctgtagagagtatattcttggtctcaaaatggaaactact
agaaaaactttacccaaaagcactttggcagaacagaaacgactatgcgagatggctgct
tactttacacactgcaatttgcagcctgttcatcaaattctaactctacgaacggctgta
aatatgttcttcaaactaaagaattataaaactgcagcttcatttgctagaagattattg
gaacttggtccaagggcagaggttgcacagcaagctaggaaaatactacaggcatgtgac
aaaaatccagtcgatgaacaccagctgttatacgacgagcacaatccatttactctatgt
gcgggtacttacactccaatttatagaggcaaacccgaaatcaaatgctcactttgtggg
gccagctatcaacctcaattcaaagaaactatctgcacagtctgcgaggtagctctggtt
ggaaaagaaactattggactgaggataagtcccttgcaattccgataa
DBGET
integrated database retrieval system
