Neodiprion virginianus: 124306623
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Entry
124306623 CDS
T09046
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124306623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124306623
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124306623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
124306623
NCBI-ProteinID:
XP_046623393
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Position
6:9269704..9273536
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AA seq
500 aa
AA seq
DB search
MSSKRTATSELNHDNWNDEETREEAGTFSKASKEDLQRRVIKSARRRIVNSGGDDAPKAA
FGAFTAFKTAAPAGSSPFSFLANTSNATNTKSSEKTVANKVGPSNGSVNPAANGPESKDS
SSLKQESMSKNSDAKHFPTGKEDGKIFKKSTDYYAKLKGLNESVTQWIKSHVDSNPFCIL
TPIFKDYDKHLKEIEAKHGQETTSTILSPEKTGEKSNLESSPVKSKSNLETGKTESQTKK
SVFSNPSVGNAESKSESSIFKNANVGKSLFGNTETTSEVKSVFGSVSTERNPFLSTSFTV
VEDKKKETESEITDQKPTASLSFPPSGPTATFSFGQSSATSTASAGFSFGGGKPFSFGNV
AKTTEAEETKEDEEKDDDDEPPKPDFKPITEDDAIYEQRCKVFVKKDGNFADRGVGTLFL
KPTPNDKTQLIVRADTSCGNLLLNTILTEGIPMQRMGKNNVMMVLLPTPDSKPPPTPVLL
RVKTSEDADALLEKLNKHKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaaacgaactgctacctcagagctgaatcacgataattggaacgatgaagaa
actcgggaagaggcaggaacgtttagcaaagcatcaaaagaagatttgcagagaagagtc
atcaaatcggccagacggcgaatagtcaacagcggaggggatgatgcaccaaaagcagcg
tttggcgcgtttactgctttcaaaactgctgcacctgcaggttcttcaccctttagcttc
cttgcaaatactagtaatgcaacaaatacgaagagtagtgaaaaaacggtggctaataaa
gtaggtccgagcaatggatcggttaaccctgcagcgaatgggccagaaagcaaagattct
tcttcgttgaaacaggaatcaatgtcgaaaaattcggatgctaagcattttccaactgga
aaggaagatgggaagattttcaaaaaatcaacagattattatgcaaaattgaagggactt
aacgaaagcgtcactcaatggatcaagtcacatgtagattcaaatccgttttgtatttta
accccaatatttaaagattatgacaagcatcttaaagaaattgaagctaaacatggacag
gaaaccacctcgaccattttgagcccagaaaagactggggaaaaatctaacttggaaagt
tcacccgttaagagtaagtcgaatttggaaactggaaagactgaatcacagactaagaag
tcggtctttagtaatccatcagtgggaaatgcagagtcgaaaagcgaatcatcgattttc
aagaatgcgaatgttggaaaatcgttattcgggaatactgaaactacctcggaagtcaaa
agcgtttttggcagtgtttccactgaacggaatccatttttaagtacatcgtttacagtt
gtagaagataagaaaaaggaaaccgaatctgaaattactgatcagaaaccaacagcaagt
ctttcgtttccaccatctggtcccacagccacattcagctttggccaaagttcagcaacc
agtacagcttcggcaggattcagtttcggaggtggaaaaccattttcttttggcaatgtg
gctaaaactacagaagcagaagagactaaagaagacgaagaaaaagatgatgatgacgaa
ccaccgaaaccagacttcaaacccatcacggaagacgatgcaatttatgaacaacgatgc
aaggtatttgtcaaaaaagatggaaattttgctgatcgaggagtaggtaccctgtttctg
aagcctacacccaacgacaaaacacagctaatagtgcgtgccgatacttcgtgcggaaat
ttactcttgaatacaatattaaccgagggtataccaatgcagcgtatgggaaagaataat
gttatgatggttcttcttccaacaccagattccaaaccaccaccgacaccagttttgtta
agagttaagacgagcgaggacgccgatgcgttgttagaaaagcttaataagcacaagaaa
tga
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