Neodiprion virginianus: 124306815
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Entry
124306815 CDS
T09046
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124306815
09122 Translation
03013 Nucleocytoplasmic transport
124306815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124306815
03041 Spliceosome [BR:
nvg03041
]
124306815
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124306815
Spliceosome [BR:
nvg03041
]
Complex C
Other components
EJC/TREX
124306815
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124306815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
CTB
Motif
Other DBs
NCBI-GeneID:
124306815
NCBI-ProteinID:
XP_046623806
LinkDB
All DBs
Position
6:complement(3307607..3316217)
Genome browser
AA seq
1428 aa
AA seq
DB search
MAGKIWNSELWKSWDKHGKNDFLKLIKQKYKEGNTTEWRKGLYQLISNGIRGNVKKDSVV
STLGELMNIDGAIPSAVVDIFTLIDAEAHNEDRNNLYYIVKESEKFLTDRILKERLEIDT
LQDVGTLKNRNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQEYQENEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRPDDDSLFIPLIRSYMSDQQVLCEVLGFKYRSS
TAATPFSLQKVAALMLQHHVIKLDDILPWLVPDDKDIIKDHELAMKQAKEYVRKMSVIST
KDKEEVPEEKDVVQDKYVTNQKFGLCQALLEVGAWDIAQNLFKRLPDHCFTDQRPIALAL
CRMIQSIIEPAYRKYCIISPKLPGRKVPPMKSPLAPLPFYKLDDIHDRLLPMLMILGPNL
HHDAILMYKIMRLCHVAIKQCELDSNKQPISKENNLYYDVLTILDVALLPSLSFMDCNCC
VAEEIWNILKFYPYQSRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKP
VGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDILGYCLVEALAGA
DRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLIVKEIV
QKMAGIEAAEEMTREQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKDALSEHDLAVALC
LLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSM
LQDNHIHSDVAFFLARPMFAHAINIKYDSLRKADPNYKKMSSALKQAKYAEAAQAVMAPV
ALSVRPLHPLKVWEDISPQFLVTFWSLTMYDLYVPVESYEREINKLKQLALQAADSKDMN
MSKGKKEQERYTTLTEKLQDEKKKQEEHVGKVFAYLRQEKDSWFLSRSAKSAKNETITQF
LQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEAN
RYGRFLCAMLETVMRWHSEEALFDKECSNYPGFVTKFRVSNQFSEANNMVGFENYRHVCH
KWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQ
RQDLHVLATSYSGQLKAKTPSMIRESDFHHVGDKAGKNLESSNDDSVEKVSNGVAIKEVN
NGDTRTEKDGQELREKRSISGQTHHDSTEKLRKKEESKDLIEGREKSIKKEEPKSDDTTD
KKERKYYKDEHYYGGAVDNLDRDLSSVSNSSGSSGPSQDAPERDTKRRKVENVPKNKQEN
RRTEVAAEKKERSGKTKVRTDEEKELRRERKLGRKRDRTEESIVPAEQKRRKDDERAKGT
HQNGDVPEHREKHHYNKEKSPYTKERVHEREGRETRDKHRRSSDPKRR
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaaatatggaattccgagttatggaaatcatgggataagcatggaaaaaat
gatttcctcaagttaatcaagcaaaaatataaggaagggaacacaacagaatggagaaag
ggtttataccaattgatatcaaatggaatccgaggaaacgtaaaaaaggatagtgtagtg
tcgacacttggtgaacttatgaatattgatggtgcgattccatcagctgttgtagacata
tttacattaatcgatgctgaagcgcataatgaggatagaaacaatttgtattacattgtc
aaagaatcggaaaagtttctcacagatagaatcttgaaagagcgtctggaaattgatact
cttcaagatgttgggacgttgaagaatcgcaattttcaaactaagttcatcaaagttaaa
accaaactctactacaaacagcgaaaattcaatttgtttcgcgaagagagcgaaggatat
tctaaactgattgttgaattaaatcaagaatatcaagaaaatgaagttgcatctaccttg
gagattgtcaagtctctcattggttactttaatcttgaccctaacagagttcttgatatt
ttgctggaaacatttgaaaatcggccagatgacgacagtttatttattcctctcattcgc
tcttacatgagtgaccagcaagtactttgcgaagttctaggctttaaatatcgctcttca
acagcagcaaccccattttctttacagaaagttgcagcattgatgttgcaacatcatgta
atcaaactggacgatattttaccctggcttgtgccagacgataaggatataattaaggat
catgaattggcaatgaaacaagctaaagaatatgttagaaagatgagtgtcatatccact
aaagataaggaggaagtccctgaggaaaaagatgtcgtacaggataagtacgttaccaat
caaaaatttggactctgtcaagcattattagaagtcggtgcatgggacatagcacagaat
ttatttaaacgactaccagatcattgctttactgatcaacgaccaattgcactggcactt
tgcagaatgattcagtcaatcatcgaaccagcctacagaaaatactgcatcatatcacca
aagttacctggtagaaaagtgccgccaatgaaaagccctctagctccactgcctttttat
aaattggacgacatacacgatcgtttactgccaatgctgatgatacttggacctaactta
catcacgatgcaattttgatgtacaaaattatgcgtctgtgtcacgttgctatcaagcaa
tgcgaattggactcaaataagcaacctataagcaaagaaaacaatctttactatgatgtg
cttacaattttggatgtggcactactgccctctctttcgtttatggattgcaactgttgc
gtagctgaagagatttggaatatactaaaattttacccttaccaaagccggtactgtctt
tacgcacgatggaaaaatgatacacctttacaacatgcagcgttgcttagaaaaagagca
gatgctcaaaaaaagattaagtcaataatgaagcgcgtcagtaaagagaccataaaacca
gtaggaagatctattggcaagctgacccattcttcccctggagttttgtttgattatgta
ctgatacaaattcaattgtacgacaaccttattgggcctgtggtggattcccttaaatat
ttgacaaacatctcgtatgacatacttggctattgcctggtagaagctttagctggagct
gacagggacagatttaagcatgacggtacaagcatttctctctggttacagtcacttgct
tctttctgtggagctatctttaaaaaatacaacattgagcttactggacttctacaatat
gtggccaatcaacttaaggcacagaaaagcttagatttgttaattgtaaaggaaattgtg
cagaaaatggctggtatagaagccgctgaagaaatgactcgtgaacaattggatgcaatg
gcaggcggggatctcctcaaaaatgaagctggatacttcagtcaagttcgaaatacgaaa
aaatcatcacagcgtttgaaagatgctctgtcagaacatgacttggccgtagctctttgt
ctactcatggcccaacaaaaacactgtgttgtatacagagaaaccgacaagtctcacctc
aagcttgtaggtaaattatatgaccagtgtcaagatacactcgttcaatttggcacattt
cttggatcaaccatgactgtggacgaatatgtagaacggctaccgtcgatacactccatg
cttcaagataatcacatacattctgatgtcgcattttttcttgcacgaccaatgtttgct
catgccattaatataaagtacgattcacttaggaaagctgatcctaattataaaaaaatg
tcaagcgcattgaaacaggcgaagtacgctgaagcagcacaagctgttatggctcctgtt
gctctttctgtcagaccattacacccacttaaagtatgggaagatatttcaccacaattt
ttagtgactttctggtcacttacaatgtatgatttgtatgttcctgttgagagctatgaa
agagaaataaacaagctcaaacagcttgctttgcaggctgctgattccaaagatatgaac
atgagcaagggcaaaaaggaacaagaacgttatacgactttgactgaaaaactgcaggat
gagaagaaaaaacaagaagaacacgttgggaaagtttttgcctatttaaggcaagaaaaa
gactcatggtttttgtcgaggagtgctaaatccgctaaaaatgaaactattacacaattt
ctacagttatgtttgtttcctcggtgcacatttacaactgttgacgctatgtactgtgcc
aaatttgtacacactattcactctctgaaaactgcgaatttctctacacttctctgctat
gatagactcttctgtgatatcacttactcggtaacatcatgtacagaaaatgaagctaat
cgatatggtagatttttatgcgctatgttggaaactgtgatgcgatggcattccgaagaa
gctcttttcgataaggaatgtagtaactaccctggttttgtgaccaaatttcgtgtcagc
aatcagttctcagaagcaaataacatggttggatttgaaaattacagacacgtctgtcac
aagtggcattacaaaataacaaaggctatcgttgtttgcctcgattcaaaagattacgtg
caaataagaaattccttgataatacttatcaaaatactaccacattttcccgttctggca
aaactctcgcaaatacttgaaagaaaagttgaaaaagtacgtgaagaggagcgtggtcag
cgccaagacttgcatgtattagcaacatcctacagtggacaattgaaggcaaaaacacca
agtatgatccgtgaatcagattttcatcacgttggcgacaaggctggaaaaaaccttgaa
tcgtctaatgacgatagtgtggaaaaagttagtaatggagttgcaatcaaagaagttaat
aatggagatactcgtacagaaaaagatggacaggaattacgtgaaaaacgcagcatatca
ggccaaacccatcatgacagtactgaaaaactccgtaaaaaagaagaaagtaaagatctg
atagaaggaagggagaagtcaattaaaaaagaagaaccaaaatcagatgatacgactgat
aaaaaggaacgaaaatattacaaggatgaacattattatggtggagctgttgacaatttg
gatcgtgatctttcgagtgtgtctaatagcagtggtagttcgggtccatcacaagatgca
cctgagagagatactaaacgaaggaaagtcgaaaatgttcccaaaaataaacaagagaat
aggagaacagaagtagctgctgaaaagaaggaacgttctgggaaaacaaaagtgcgaaca
gacgaagagaaagaacttcgcagagaaaggaaacttggtcgtaaaagggatcgaacagaa
gagtctattgtacctgcagaacaaaaacgaaggaaagatgacgaaagagcaaagggaact
catcaaaacggtgatgttccagaacacagagaaaaacatcattataataaggaaaaatct
ccatacacaaaggaacgggttcacgaacgagaaggacgggaaacacgcgacaaacatagg
cgaagttcagatccaaaacggaggtga
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integrated database retrieval system
