Neodiprion virginianus: 124306825
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Entry
124306825 CDS
T09046
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124306825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvg03000
]
124306825
03021 Transcription machinery [BR:
nvg03021
]
124306825
03036 Chromosome and associated proteins [BR:
nvg03036
]
124306825
Transcription factors [BR:
nvg03000
]
Eukaryotic type
Helix-turn-helix
ARID
124306825
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124306825
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
124306825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
124306825
NCBI-ProteinID:
XP_046623832
LinkDB
All DBs
Position
6:complement(5438981..5477165)
Genome browser
AA seq
1827 aa
AA seq
DB search
MAKFLNKDPVTYQRERDGFIKGLHHFHETRGTPFRRPPKISGNEIDLYLLYVLVTAHGGW
IKVNSRNEWTSLCEQFHLPTECVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDEDEDS
RHRKWSARALHSVPLTYNHHQHNVAESLREYNGLSANLYKPSNYDKLALSLLSPLPNEQD
FAINVCTLLSNEGKHSLRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRVRNYSINSF
WSDVIDTQDVLDLTDERDFMKKAINTPKTFSRRKILEKEKQNKLIQAENEENVTPMEVDE
VPTECSRLDTAQTEREESESCRYQNQNQNQNQNSIRFDEEDKDLFCVGRTLGTQDPYGQR
ILQIASILRNLSFTPENILILGRNRCFLRFVLLCVSTRWSNLHQLGFDMLGNVANEILLK
EAGHRITNVMLSCVSRGIDSPDRFIVISCLEVLNKISQQDSNEEIITLGLDDSAYEIICR
FLALSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILM
RVVETVSTITVPATVSGQSAAVTPAAPVQVVASSVPSVPTTITATTAPVSPAPSRPTTPA
SVNSKQTSHKAIEASNTIQQQHAHQQIIQENEQFALSWLKATFEHSTGVKIEQEELYKKY
LGCCTKIGRRGVIAPLHFPRCVRSVFGGTVGPNPIKGESTGTQYYEGIKVRSVPLTVSFS
SQTLPASNVIHPIQATNTTPVKVLPTQQRTLKTISPAPDSTALENSITGAQRTPAPASPI
LKAQLSAPPKPPSTIPNQPQIPVTKVDSKSQVSVSHPHLSQALLASGSQLQQQHQSQVQV
AMKDDPRSGATSSSIIKSLLATKVTISGDCMPSAAASCVSAPSACVINTTTSIASSISAN
QLITSNQVAQRQQQQRLLQAQLTGVIQPAAPTATPAVASPKIISSNKLKSTTAATPAKKF
QRINGAKVIIPNNCDKADVNDSENINQVVTSTTVISNPTENHISSTVKVCRPPPLVPLSG
GNKTNHRTICTSLAEDSDSTNNSLASSSGIGGSRDCSGVGAEEENSLTSFEGILLNGAPS
NLDIDAQEDGSSKDSSSVSSKDKPLQSMMLADLLERKVDKEPIMNGVLGKNSINEKGMDL
VENHIEKVLKESPTDVKVKTEVDENDVLQTEGSEETLIEAPRGIKRSASEPDEIESKKPK
YSNGTRSPEPGVDLKTVESTVSSLKSEEPDDDKDSEKATVSSTAANLYAALAADCIEDEI
DLVDDHAILVKDEPIVKEEPQVLLNQSEQQQPLHQQLQQTQTQVQTQVQTQVQTQVQTQM
QTQMQTQMQTQTQTQTPQQQQQHHHQQHQHQHHQQQLIVAAPRQIVVQQAIQSNNQVIIP
TNTVKGRQPQQPQVLLQQGAGGQLQYVVSGGVPGQNYVLAQSQTALVQGQAQTVLVAQTT
QQQGTGAKTIIILQPQSAAQPSSQKMVAVTPQGQQVVVTQVPRPILQSPALSNIPPPLVP
TSATIPQASIIVNSSVAQANTNAVTVAIPAVAQQGSITTSVPSRVVTPTPASTPPPTRPT
TPHQAAATHGLAVKQSLKITKTTNSSTSTETDSKPSTSQHPVETKTITIKIDPNAFLCEW
RGCLRQFKTAHEVYLHVCEAHCPIGGEEILCLWASCDGLKRRRFSLMTHLYDRHCNSEAM
ALRRKQLTVTGKTEISTSTPATPHHPGYAPNAAFHAIKRHALEFVNPKELMQRPSKPAAA
TSSTSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSAHGRRHLRAYEPHLAGV
ALSNVESSRTIAQVLYDMNDQSSSSHR
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattcctcaacaaggaccctgtcacctatcagcgggagcgtgacgggttcatc
aagggacttcatcattttcacgagactcgcggaacacccttcaggaggccaccgaaaatc
agcgggaacgagatagacttgtacttgttatacgtgctggttaccgcccacggaggatgg
atcaaggtaaactcgaggaacgaatggacgtcactttgcgaacagtttcacctaccaacc
gaatgcgtgaacagcggtgtcggcctcaaacaaatatacctaagatacctagacaggtac
gaaaaggttcacttcctcggtgaagatgggcagcaggctgacgacgaggatgaagactcg
agacaccggaaatggtcagcgagggcgcttcactcggtacctttgacctacaatcatcat
cagcacaacgttgccgaatccctgcgggaatacaacggtctctcggcaaacttatacaag
ccgtctaactacgacaagcttgctctttcgctgctctcgccgctaccgaacgagcaagat
tttgcgataaatgtttgcaccttgctgtcgaacgagggtaaacactcgcttcgtcttgac
aagtatccacggcttgttaatatactattggcacacgctggagtattcgattctcctggc
actcgacagcttttcatcgaagtctattcacgggtcaggaattactccatcaactcattt
tggtccgatgttatcgatacgcaagacgtcctggacctgacggatgagagagactttatg
aaaaaagccatcaatacgccaaagactttctcgaggcggaaaattcttgaaaaagaaaaa
cagaacaagctcatacaggcggaaaatgaggaaaatgttacgcctatggaagtcgatgag
gtaccaacggaatgctcgcggttggataccgcgcaaaccgaaagggaagagagcgaaagt
tgtcgatatcagaatcagaatcagaatcagaatcagaattcgataaggttcgacgaggag
gacaaagacttgttttgtgtgggtcgaacgttagggacacaggacccttacggccaacgc
atacttcagatagcttccattctaaggaacttgagctttacccccgaaaacatattgatt
ttagggaggaatagatgtttcctaagatttgtactcctatgcgtcagtaccaggtggagc
aatctgcatcagcttggttttgacatgttaggcaatgttgctaatgaaattctactaaaa
gaagctggtcatcgaataaccaatgtcatgctgtcctgcgtgtcacgaggcatcgactca
cctgacagatttattgtcatatcctgccttgaggtgctgaacaaaatcagccagcaagat
agtaatgaagaaattatcactctcggcctagacgatagcgcctacgaaataatatgcagg
tttctagctctgagtgacattgccttgcttgtttatactttggagtgtctctacgcgctg
acttctttgggtgaacgtccttgtacaagcgtcgcgcgggtacgcggggctatagataca
ctagttgctctggtcacagtggaggcgcaaagctacggaccaaaagcttgcattttgatg
agagtcgtggagacggtatcgactataacggttccagcaacagttagtggacaaagcgct
gctgtaacaccagcggcacctgttcaggttgtagcttcatctgtaccatctgtaccgacg
acaatcactgccacgacagcccctgttagtccagctccctcgaggcccaccactccagct
agcgttaatagcaaacaaacttcgcataaagcgatagaagcctcgaatacgatacagcag
caacacgctcaccagcaaattattcaagaaaacgagcaattcgcccttagttggcttaag
gctacattcgaacactcgacgggagtgaaaattgaacaggaagaactatataaaaagtac
cttggatgctgtacaaagattggaagacgaggtgtaatcgcgccgcttcattttcccaga
tgtgttagatccgtttttggcggaaccgttggaccaaatccgataaagggagagtcaacg
ggaacccagtactacgaaggcatcaaagttcgctccgtaccactgacagtgtctttttcg
agccaaaccttaccagcgagtaatgtgattcatccgatccaggcgaccaacacaactcca
gtaaaggtgcttcccacacaacagcgaacactcaagaccataagtcctgctcccgatagc
acagccctagaaaattccataactggtgcacagagaaccccggcccccgcgtctcccatt
ctcaaagcgcagttatcagccccaccaaaaccaccctctacgattcccaatcaaccccag
attccagtcaccaaggttgactccaaaagtcaggtgtcagtgtcgcacccccacctgagt
caagccctgctggccagtggttctcagttgcaacaacagcaccaatcccaagttcaagta
gcgatgaaggacgatcctcgaagcggtgcaacttcaagttcaataataaaaagcctcttg
gctacaaaggtaacgatcagcggcgactgcatgcccagtgccgctgccagttgtgtgtct
gccccttctgcctgcgtaataaacactaccactagcatcgcatccagcatcagtgccaac
cagctaataaccagcaaccaggttgcccagcgtcagcaacaacaacgactacttcaggct
caattgacaggagtcattcagcctgcagcgcctactgccacaccagcagtagcttcacct
aaaataatctcaagtaataagctgaaatctactactgctgccactcctgcaaaaaaattc
caaaggattaatggagctaaggttatcatccccaacaattgtgacaaggctgacgtaaat
gactctgagaacatcaatcaagtggtaacgtcaacgacagtgatttcgaatccaacggaa
aatcacatatcctccacagttaaagtctgtcggccacctcctctagttccattgagtgga
ggaaataaaactaatcatcgaactatctgtacatcattagcagaagactcagattctact
aataattcgctcgcatctagtagcggaattggtggaagtagggattgttctggtgttggc
gctgaggaagagaactcattgactagttttgagggtatccttttgaatggtgcacccagt
aacttggatatcgatgcccaagaggatggatcttcgaaagattcatcaagcgtaagctcc
aaagacaaacctctgcaaagtatgatgctggcagatctattggagagaaaagttgacaaa
gaaccaattatgaacggcgttttagggaaaaattcgataaacgagaagggaatggacctt
gtagaaaatcatattgaaaaagtgttgaaagaatctccaacggacgtgaaagtaaaaacc
gaagtagacgaaaatgacgtattgcaaacggaagggtctgaagaaacgcttatcgaagca
ccaaggggtataaagagatcagccagtgagccagatgaaattgaatcaaagaaacctaaa
tattccaatggtacgagatctccagaacctggtgttgatttgaaaaccgttgaatctaca
gtttcaagcctgaaatcagaagaaccagatgatgacaaagatagtgaaaaagcaactgta
tcctcaacggccgcaaacctgtatgctgcgctagctgcagactgcattgaagacgaaatt
gacctagtagatgatcatgcaatcctagtgaaagacgaaccaattgtaaaagaagagcca
caagtgttgttaaaccaatctgaacaacaacaaccgctacatcagcaactccagcaaact
caaacacaagttcaaacacaagtgcaaacacaagtgcaaacgcaagtgcaaacacaaatg
caaacacaaatgcaaacacaaatgcaaacacaaactcaaacgcaaacaccacaacagcag
cagcaacaccatcaccaacaacatcagcatcaacaccatcaacaacagctgatcgtagct
gcacctagacaaatagtcgtccaacaagctattcagtcaaataatcaagtcatcattcca
acgaacacagttaaagggagacaacctcaacagccccaagtccttttgcaacaaggagca
ggaggtcagttacagtatgttgtttctggaggtgttcctggacaaaattatgtactcgcc
cagtctcagactgctctggttcaaggacaggcccaaacagtcttagtggctcaaacgacg
cagcaacaaggaactggcgcaaaaactataattattttacaaccacagtctgcagcccaa
ccaagttcgcagaaaatggttgcagttacaccgcaagggcaacaagttgtcgtgacacag
gtcccaagaccaattttgcagagcccagccttgagtaatatccctccgcctttggtgccg
acttcggcaacaatccctcaagcttccattatagtaaatagctccgttgctcaggcgaat
acgaacgcggtaacagtagctattccagccgtagctcagcaaggatcgataactactagc
gtaccgtcgagagtggttacccccacacctgcatccacccctccgccaaccagacccact
acaccgcatcaggcagctgccactcatgggcttgctgttaagcaatctctcaagataacg
aagactacgaactcctcaacatcaaccgaaacggattctaaaccttcgacgagtcaacat
cccgtcgaaactaagaccatcacaatcaaaattgatcctaatgcttttttgtgcgaatgg
cgaggttgtttaaggcaattcaaaacggcccatgaagtttaccttcacgtatgcgaagcg
cattgtccaattggaggtgaagaaattttgtgtctttgggctagctgtgatggattgaag
agacgtagattttctctgatgactcatctgtatgacagacactgcaactcagaggctatg
gcactaagaagaaagcaattgactgtgactggtaaaactgaaatatcaacatcaacacca
gcgacaccacaccatcctggctatgcacccaatgccgcatttcatgcgatcaaaaggcat
gccctggaatttgtcaatcccaaggagttaatgcagaggccatccaagcccgctgcagcc
acttcgagcacttcttctcccagaccagggcaaaatcctccaccggaacaggatgacaac
gaaggcccagtgaccaaaagtattcggctgacggcagctttgattctcagaaacctagtc
atttactccgcacatggaagaaggcatctcagggcatacgaacctcatctggcaggagtg
gcgctaagcaatgttgaatcatccagaacaatagcacaagtgttatatgacatgaacgat
cagagcagcagtagtcacaggtga
DBGET
integrated database retrieval system
