Neodiprion virginianus: 124306883
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Entry
124306883 CDS
T09046
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
nvg
Neodiprion virginianus
Pathway
nvg04150
mTOR signaling pathway
nvg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124306883
04150 mTOR signaling pathway
124306883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124306883
Membrane trafficking [BR:
nvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124306883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
DUF5050
cEGF
Vgb_lyase
EGF
Motif
Other DBs
NCBI-GeneID:
124306883
NCBI-ProteinID:
XP_046623957
LinkDB
All DBs
Position
6:complement(6438878..6462693)
Genome browser
AA seq
1612 aa
AA seq
DB search
MTRTSLWCILAACILCSIAYCDASPSLLFVTYKDIRVANVSRSNKVSILVKDLSQESAAL
DFYYERNLVCWSDSGLEVIQCVNSNSTYTGDKFTVVNSSMISPEGLSCDWYTGKLYWTDG
EKKHVEVTSIDGLHRKVLFWTEIYQPRAIAVVPMRSILFWTDWGDVPKIETAAMDGDPNT
REVIVSEDIFWPNGLTIDYEAELVYWSDGRLKFIAVMDYHGKNRRKVVSQGLDYPFAITY
FDQKLYWTDWQTWCIHSYDIQGQSHPRELFHGEYIPGAIEVWDPRRQPYGDNPCRHNNGN
CSHLCLLSPKPPGYTCACPTGVKLIDNTTCANGPEELLLIVQRTEICRLSLDSPDYTGFP
LPLTGIKYAIAIDFDPVEEMLYWTDEAACGIRRTNLNGTEQEDIVTTEVKNPGGIAIDWI
ARNLYWTDTGTDRIEVARLNGTSRTVLINEDLIEPRAIALAPELGWMFWTDWNEKRPKIE
RSSLDGSDRILLITKDIVWPNGIAIDLERKKIYWCDAKTDKIEVCNMDGTDRREVITDNL
PHMFGLSLLGDYLYWTDWQRRSIDRAHKLTGADREVIVDQMPDVMGLKAVHLGIVEGTNP
CAINNGGCSHLCLNRPGHNYVCACQIGYELTKDERTCVIPDAFLLFSRKENIGRISIENA
NNDNIIPVTGVKDASALDFDMSDNRIYWTDIKVKAITRAFMNGSKMERVVDLGLETPESL
AVDWISHNLYWSDTGTQRIEVVHWNRYSRRVLIWQDLSKPRCLALDPGRGHMYWTEEQGV
GSIERAALDGSRRTVILSHIGQAHGLTIDHLERRLYWADLSIPAVDSYDLQTKKRKSIIT
QNIVYPFSVTQYLDYIYWTDWNTGDIERANKTNGANRTKIHSRLESVTDLLVFHASRQSG
WNPCAEKNGYCSHLCIALPGIGGKPSTTYKCACPTHYSLAPDNKTCIAPKTFIIYSLRNV
IGRLLPDTNECPDIVLRVQGLKNVRAIEFDPITQYVFWIDSRIQSIKKTLENKLHVAVVI
PGSSGHPFDLALDPLGRLLFWSCSINDAINVTRLDNGSMLGVVVKGLGEKPRSIAVHPEK
RLLFWTDISGDVKIMQSLMDGKERVVIASNLETSTSITVDPISDLIYWTHGRQIEFADLL
GRNKRVLVSTGYVSVTHMTILFDYLYWLDREGQVIERVNKTSGAGKKTLPNRHHIIDLVS
VRTPHDKVMESHICSPLNNHGGCSHFCTGISSPRCSCPQSLVLSDDGRTCRATAACGAEH
FTCSTVAKNCIPATWRCDGQSDCPDGNDELGCPPCRQDQFKCQNGHCIDMSWVCDGTPHC
VNGIDEAHCCQSREFQCTTTRVCISRSKLCNGWDDCADGSDETSPPCTAAIPTAAISTAA
IPKQNGAMLIAFGHGIYIVGAPLVIFIIILAGVGYCCCRRRRNNAGLPDILHDSAGEPLS
PKHGRVNIKSMPIQKNGRKDFKPVMETVRLSNLNGSSIGSSYDRSHITGASSSTRGSSAG
SYPQETLNPPPSPATTANSTRYSSSNASRYRPYRHYRQINQPPPPTPCSTDVCDESDSNY
PARYRYESEPFPPPPTPRSYSHSDAAMSCPPSPSSRSSTYFSPLPPPPSPVP
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgactaggacaagtctttggtgcatcctggctgcttgcattctgtgcagcattgcctat
tgtgatgcatcaccatcgctccttttcgttacctacaaggatatcagggtggcgaacgtc
tcccgttccaacaaagtatcgattctcgtcaaagatctttcgcaggagagcgcagctttg
gacttttactacgaacgaaacttggtgtgctggtctgacagtggtctagaagtgatacag
tgcgtcaattcaaacagcacgtataccggggacaagtttacagtggtaaattcaagcatg
atatcgcccgagggtttgtcctgcgattggtacaccggtaagctttattggacagacggt
gaaaaaaagcatgtagaagttacgagcatcgacggtttacacagaaaagtactgttttgg
acggagatttatcaacctcgtgcgattgccgttgtacctatgagaagtatactattttgg
acggattggggtgacgtgcccaagatcgaaactgctgctatggacggtgatcctaacact
cgcgaagtgatcgtatctgaggatatattctggccgaatggtttgaccatcgattacgag
gcagaattggtatactggtcggatggaaggttgaagttcattgctgttatggattatcac
ggcaagaacagaagaaaagtcgtcagccaaggactggattatccctttgctatcacttat
ttcgatcagaagttgtactggaccgactggcaaacatggtgtattcactcgtacgatatt
caggggcaaagtcaccccagagaattgtttcacggtgaatacataccgggtgccatagaa
gtttgggatccaaggaggcaaccttacggcgataatccgtgcaggcacaacaatggaaat
tgctcccacttatgtctgctcagtccgaaaccaccaggatatacgtgtgcctgtccaact
ggcgttaagctcattgataacactacctgtgccaatggacctgaggaacttcttctcatt
gtacagcgaactgagatatgccggctgtcgctcgattcgccagactacacagggtttccg
cttcctttaaccggtatcaaatatgcgattgctatagactttgacccagttgaagaaatg
ctctattggactgacgaagcggcctgtggtatacggagaacaaatctgaatggtaccgaa
caggaggatattgtcacaacggaagttaaaaatcctggcggtatcgctatcgactggata
gccagaaatttgtactggaccgatacagggactgatcgaatagaggtagctcgtttgaat
ggaacaagtagaacagtgttgataaacgaagatcttatcgaaccaagggctatagcatta
gcaccagaattgggttggatgttttggacagattggaacgaaaagagaccaaagattgaa
cgtagtagcttggatggtagcgatagaattttactaattactaaagatattgtttggccg
aatggtattgcaattgatctagagaggaagaaaatatactggtgcgatgcaaagactgat
aaaatagaagtgtgtaatatggacggtaccgaccgaagagaagtcatcactgataattta
ccccatatgttcggattaagccttttaggagattatctatactggacggattggcaaaga
aggagtatagatcgagcacataaattgactggtgccgatagagaagtcatcgtggatcaa
atgcccgatgtcatggggttgaaagccgtacatttaggaatagttgaagggaccaatcca
tgcgcaattaacaacggcggctgtagtcacttatgcttgaataggcctggtcataattac
gtttgcgcgtgccaaattgggtacgaattgaccaaggatgaacgaacctgcgttatacct
gacgcgtttctcttattctcaaggaaagaaaacatcggacgaatcagcattgagaatgct
aataatgataatatcatacctgtaaccggggtaaaagatgcaagtgccttagattttgac
atgagtgacaatcgaatttattggactgacatcaaggtaaaagcgataactcgggcattc
atgaacggttccaaaatggagagggtcgtcgacttgggattagaaacccctgaaagctta
gcggtcgattggatatcccacaatttatattggagcgatacagggacacagagaatagaa
gttgtacattggaatcggtatagcagacgtgttttgatatggcaagaccttagcaaaccc
agatgtctggcattggatccaggaagagggcacatgtattggacggaagagcagggcgtt
ggtagcatagaaagagctgcactcgatggctcacgaagaacagtgatattatctcacatt
ggccaagcacatggcttaacgatcgatcatttggagcgtcgtttatactgggcagatctt
tccatacctgcagtggacagctacgatttacagaccaaaaagagaaaatcaatcatcact
cagaatatagtctatccatttagtgtgactcagtatctggactatatttattggacagat
tggaatacaggtgatattgaaagagccaacaagacgaacggggcgaatcgaacaaagatt
catagtcggttagaatccgttacggatttattggtctttcatgcatcgagacaatccggt
tggaatccatgtgctgaaaagaatggatattgcagtcatttatgcatagctttgccagga
attggcggaaaaccgtcaaccacttacaaatgtgcttgtccgacccactacagcttggca
cctgacaacaaaacttgcatcgctcccaaaaccttcataatttacagccttcgcaatgtt
attggtcgccttttacctgacaccaacgaatgtccagatattgtactgagagttcaagga
ttgaaaaatgttcgcgccatagaatttgatcccatcacgcagtatgtcttttggatagac
agtcgtatacaatcgatcaagaagacacttgagaataagctgcacgtggcggtagtgatt
cctggtagttcaggacatccctttgacctagctttagatcctttgggaagattgttgttc
tggtcgtgctcaataaatgatgcaatcaatgtcaccaggctagacaatggatcgatgctg
ggagttgtggtgaagggtctcggcgagaagccaagaagtatagcagttcatcctgagaaa
aggctgcttttctggacggatataagtggtgatgtaaaaatcatgcagagtctgatggat
ggtaaagagcgagtagtcattgcatctaacttggaaacttctacgagcataacagttgat
cccatctctgatcttatctattggactcatggaagacaaatcgagtttgcagatctgtta
ggccggaataagagagtcctggtttccaccggatatgtcagtgtaacacacatgacaatt
ttatttgactacctgtattggttagatagagaaggacaagtgatcgaaagagtcaacaag
acatcaggagcaggaaaaaaaactttacccaatcgtcatcacattatcgacctggtttct
gtaagaactccacatgataaagtaatggaatcgcacatttgcagtccgctcaataaccac
ggaggttgttctcatttttgtactggaatttcatcacctagatgttcttgtccccaatca
cttgtactctcggatgatggtcgaacttgcagagcaactgcagcttgtggtgccgaacac
tttacatgctcaactgttgctaaaaattgcataccagctacttggcgttgcgatggccaa
agtgattgccctgatggtaatgatgaactagggtgtccaccatgtagacaagatcaattc
aaatgtcagaatggacactgcattgatatgtcctgggtttgtgatggtacaccgcactgt
gtcaacgggatcgatgaagcccactgttgtcaatctagagaatttcagtgtacaacaaca
agggtctgcatatcaagatcaaagctttgcaatggttgggatgactgtgcggacggtagc
gatgaaacatcaccaccttgtacagcagctattcctacagcagctatttctacagcagct
attcctaagcagaatggtgcaatgctgatagcatttgggcacggcatatatatagttggt
gctccattagtgatatttataatcatattggcaggcgtgggttattgttgttgcagaaga
agacgtaacaacgcaggcctgccagacattttacacgattcagcaggtgagccactctct
cctaaacatgggagagttaacataaaatcaatgcctatccagaagaatggaagaaaagat
tttaagcctgttatggagactgtcagattgtcaaatttgaacggaagtagcattggctcg
agctacgatcgtagtcatataactggcgcatcgagctctacgagaggaagctcggctggc
agttaccctcaggagacgttaaaccctcctcctagtccggctactacagctaactcgaca
agatactctagtagtaatgcatctagatacagaccttatcgccattatagacaaattaat
caaccaccgcctccgacaccgtgcagtactgacgtctgcgatgagtctgacagcaattac
cctgcacggtataggtatgaaagtgagccatttccacctcctcctacacctcgatcttac
agtcacagtgatgctgctatgagctgtccgccttcacctagttctaggtcttcaacgtat
tttagtccgttacctccaccgccgtctccggtaccttga
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integrated database retrieval system
