Neodiprion virginianus: 124306960
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Entry
124306960 CDS
T09046
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124306960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124306960
Spliceosome [BR:
nvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124306960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Aladin
PRP4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
Ge1_WD40
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Nup120_160
Beta-prop_SCAP
WD40_RFWD3
WDR54
Motif
Other DBs
NCBI-GeneID:
124306960
NCBI-ProteinID:
XP_046624131
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All DBs
Position
6:complement(30306719..30310797)
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AA seq
527 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLTATTAESSDEERDHNRSPSDTPTTAAALGNV
HISNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKNNLRQLGEPICLFGEGP
ADRRSRLRELLASLGEDAIKKKHEDEERPLHQTERDAESTWYHEGPDSLQIARSWIASYS
LPRARDRLEKSREELELPGATRTARRQELLKKLQALSIYCSQIGDSRPISFCQFSPNSKL
LATSSWSGLCKIWSVPECSIARTLRGHTCNVSCIVFHPNATLTEDMLGENASPTCVLASC
ASDGSVKLWGGGKNEEPLAEVEGHEPHRVSRIAFHPSGRFLGTCCHDASWRLWDLEQQAE
VLHQEGHAKAVHCISFQCDGSVVATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGVDFSP
NGFHLATASEDNSCKIWDLRKRSCIYTIPAHTNLLSDVKYQRTEGQYLVTASYDNTAKIW
SNKTWQPLKTLPGHDGKVMCCDVSPDHKFIVTSSYDRTFKLWAPENM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggaccttgtttatgtaaaaaagcaaaaaactgtgcattatggatcc
cttgaggaagctgaacgtgcccggctcacagctacgactgcagaatcttcagatgaggaa
agagatcataataggagtccatcagatacgccaacaactgctgctgccctgggcaatgtg
cacatatcaaatgaatacatggaacttgaagatgagatgtctaaagacaggcaagctttg
ctcgaagaatttgagcggagaaaaaaagccaggcagattaatgtttccaccgatgattcg
gaagtgaaaaacaatctgcgccaattaggggaaccaatttgtttgtttggtgaaggccca
gcagacagaaggtccaggttgagagaattattggctagtttaggtgaagacgctattaaa
aaaaaacatgaggacgaggagcggccattgcatcagacagaacgagatgcggaatcaact
tggtaccacgaaggaccagattcccttcaaattgcccgctcgtggatagcatcgtattca
cttcccagggcaagagatcggcttgaaaaatctagagaagaattagagcttccaggggct
acacgtactgcacgtcggcaggaacttctgaaaaaattacaagctctcagcatttattgc
tcccaaattggagacagccgtcccatatcattttgccaattcagtccgaattcaaaatta
ctggcaacatcttcctggtctgggctttgcaaaatttggtctgtacctgaatgctcaatt
gccagaaccctcaggggccatacctgtaatgtaagttgtattgttttccatccgaatgca
acactcactgaagacatgctgggagaaaatgcgtcgcctacatgtgttctagcaagttgt
gcttcagacggaagtgttaagctgtggggtggaggcaaaaatgaagagccgttagcagaa
gttgaaggtcatgagccccatagagtatcaaggattgcatttcatccatcgggtcgcttt
ttaggaacctgttgccacgatgcttcttggcgactgtgggatctggaacaacaagctgaa
gttttgcatcaagagggtcatgccaaggcagtacattgtataagtttccaatgtgacggc
agcgttgttgctacgggaggccatgattcctttggcagagtttgggacctgagaacaggc
cgctgtatcatgtttatggagggtcatttgaaatctattttcggagttgatttttcgcct
aatggttttcacctggctactgcaagcgaggataattcgtgcaaaatatgggacttaaga
aaaagatcgtgtatttacactataccggcacacaccaatttattatcagacgtgaagtat
cagcgtactgaagggcagtatttggtcacggcgtcgtatgacaatactgcgaaaatttgg
tccaacaaaacatggcaaccgttgaagacattgccaggacatgatggtaaagtaatgtgc
tgcgacgtttctcctgaccacaaatttatagtcacaagctcatatgatagaacatttaag
ctctgggcacctgaaaacatgtga
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