Neodiprion virginianus: 124307349
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Entry
124307349 CDS
T09046
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
nvg
Neodiprion virginianus
Pathway
nvg03420
Nucleotide excision repair
nvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124307349
09124 Replication and repair
03420 Nucleotide excision repair
124307349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nvg03051
]
124307349
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124307349
Proteasome [BR:
nvg03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
124307349
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
124307349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Ubiquitin_2
Crinkler
TBK1_ULD
OTU1_UBXL
CUE
Ubiquitin_5
Dsc3_N
Rad60-SLD_2
UBA_2
Ubiquitin_4
UBA_9
Motif
Other DBs
NCBI-GeneID:
124307349
NCBI-ProteinID:
XP_046624887
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Position
1:complement(31843890..31848775)
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AA seq
365 aa
AA seq
DB search
MIITLKNLQQQTFTVEIDPSKTVKELKDKIEVQKGFPAQHQKLIYAGKILTDEQPLTTYN
IDEKKFIVVMVTKPKAGAGPSTSEEQHADGDNNKEHTAASPATLTTTPTAAEDVRPRPPP
VVLDPPAAVAPTGAQAESALLMGEEYNTMVNNIMDMGYDREQVEQALRASFNNPDRAVEY
LLTGIPAQLFEDPPEDPPEAQDQAQDPLAFLRTQPQFQQMRQVIQQNPQLLNTVLQQIGQ
TNPALLQLISQNQEAFVRMLNEPVGATGGTVQGTPAAAAAVAQGGLTGGTGAVAGIGAGA
GAGVGAGAGASLGAGVIQVTPQDKEAIERLKALGFPEHLVVQAYFACEKNENLAANFLLS
QNLDD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgattattacgcttaaaaatcttcaacaacagacgtttaccgtcgagattgacccctcg
aaaacggttaaagaattgaaagacaagatcgaagttcagaagggttttccggctcagcat
caaaaactcatatacgcgggaaaaatattgaccgacgagcagcctttaactacctataat
attgacgaaaaaaagtttatcgtggttatggtaacgaaacctaaggctggcgctggtcca
agcactagtgaggaacagcatgctgatggtgacaataacaaagaacacacagcagctagc
ccagcaaccttgactacgactcctacggctgcagaagatgttcgtccccgaccaccacca
gttgtgcttgacccacctgcagcagtggcacctactggagctcaggcagaaagtgctttg
ttgatgggagaagaatataatacaatggtcaataatattatggatatggggtacgatcga
gagcaggttgaacaagcattaagggcaagtttcaacaatcctgacagagcagtagaatat
ttactcactggtattccagctcagctgtttgaggacccacctgaagaccctcctgaagcc
caggaccaggctcaggatcccttggcattcttacgcacccaaccacagtttcagcaaatg
cgccaagtgattcaacaaaatccgcaattactaaatactgtactgcaacagattggacag
accaatccagccctactgcaattgatttcacagaatcaagaagcctttgttcgcatgctc
aacgaacctgttggtgctaccggcggaacagttcaaggaacgccagcagcagcggctgcg
gtggcccaaggaggacttacaggtggtacgggtgccgttgctggtattggtgctggtgct
ggggcaggtgtgggcgcaggtgcaggtgcgagtcttggagctggagtgattcaggtgacg
ccacaagacaaagaagcaatcgaaaggctgaaggcactgggattccctgaacatcttgtt
gttcaggcttattttgcatgtgaaaaaaatgaaaacctagcggctaactttctgctgtcg
caaaatctcgatgattga
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