Neodiprion virginianus: 124307448
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Entry
124307448 CDS
T09046
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvg03009
]
124307448
Enzymes [BR:
nvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124307448
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
124307448
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Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
124307448
NCBI-ProteinID:
XP_046625053
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Position
6:complement(29758222..29760564)
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AA seq
581 aa
AA seq
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MSADKRIATDEEEEDEEEKPKNFHEMELDDRILKAVAKLGWLEPTLIQEKTIPLLLDGKD
VLVRARTGSGKTAAFAIPIIQKILSGKQTQMRQEIKALILAPSKELCKQIHQVVSDLTNK
CSREVKSVDISSPLELNAQKPLLAEKPDIVIATPGRLLQHLKANNVSVKKTLETLVIDEA
DLVFSFGYEDDVKSVLAYLPTVYQAVLASATLSEDVLSLKALVLHNPAILKLEEPPLAPP
SQLAHYTLAAEENDKAAILYALLKLHLVRGKTIIFVNTVDRCYKLKLFLEQFGIPTCVLN
SELPASARCRAVTYFNSGTYDIIIASDEKALEEVNLISHLGCCTDFGIPNYCTIFTMFQP
LMVKDKKSKRRKDNESGVARGIDFQFVSNVINFDFPLDVTSYIHRAGRTARGKNQGTALS
FVAMRERSLLDEVDTQLKEGYNRENIFKTYQFKLDEVEGFRYRAKDAWKAVTRIAVREAR
LKEIKQEVLNCEKLKGYFEENPKDLKSLRQDKALHTVRQQPHLKDVPEYIVPQTLKRIAG
IGKRKRKFDREAAATGSSASKSKHLARASNPLISLSIPRKK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggataaaagaattgcaacagacgaggaggaggaggatgaagaggaaaagcct
aaaaacttccacgagatggaattggacgatcgaatactcaaggcagtggcaaaacttggt
tggctggaaccaactttgattcaggaaaaaacaataccgcttttattggacggaaaggat
gtattggtgcgagctagaactggctctggtaaaactgcggcctttgcaataccaataata
caaaagatcttgtctggtaaacagacacagatgaggcaggaaattaaagcgttgatacta
gcacctagtaaagaactttgcaaacaaattcatcaagtggtgtccgatttgacgaacaag
tgctcaagggaagtaaagtctgttgacatcagctcaccactcgaacttaatgcacagaaa
cccttactcgcagaaaaaccagatattgtcatcgccacgcctggcagacttctacaacat
cttaaggctaataatgtcagtgtcaaaaaaactttggagactcttgtcattgatgaggct
gatttggtattttcatttggatatgaagacgatgttaaatctgtactagcttacttgcct
accgtctaccaagctgttctagcttcggccacactctccgaagatgtactgtcgttgaaa
gcattagttctacataatccagcaatattgaaattagaggagccacccttagcaccaccc
tcacagttggcacattatactctggctgctgaagagaatgataaagcagctatattgtat
gctttgcttaaactgcatttagtcaggggaaaaacaatcatatttgtaaatacagtggat
cggtgttacaagctgaagttatttttggagcaatttggaatcccaacgtgcgttctgaac
tctgagttgcctgctagtgcaagatgcagggcagtaacgtatttcaatagtgggacttat
gatattatcatagcatcggatgagaaggccttagaagaggtgaatttaatttctcatctt
ggctgctgtacagattttggcattcctaattactgtacaatttttacaatgtttcagcca
cttatggtcaaagataaaaaatctaaacgcagaaaagacaatgagtccggtgtggcacga
gggatcgattttcagtttgtgtccaatgtgataaattttgattttccattggatgtgact
tcttatattcatagagcaggacgaacagcaagaggtaaaaatcaaggcacagcgcttagc
tttgtagctatgcgagaaagatctttgctcgatgaagttgacactcagttgaaggaaggt
tataacagggaaaatatattcaaaacttatcagttcaaattagacgaagtcgaaggtttc
aggtatcgagcaaaggatgcctggaaagcggtgaccagaatagcagtgcgcgaagctcgt
ctaaaagaaataaagcaggaagtactgaactgtgaaaagttgaaggggtattttgaagaa
aatccaaaagacctaaaatccctacggcaagacaaggcactgcacacggtgaggcagcag
ccccatttgaaagatgttccagaatacatagtgccccagacgctgaagaggatagcagga
atagggaaaagaaaacgaaaatttgacagggaagctgcagcaactgggtcgagtgctagc
aaatcaaaacacttagccagagcttcgaatccattaatcagtcttagcataccccgaaaa
aagtaa
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