Neodiprion virginianus: 124307602
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Entry
124307602 CDS
T09046
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nvg03037
]
124307602
Cilium and associated proteins [BR:
nvg03037
]
Primary cilia and associated proteins
Dynein and associated proteins
124307602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_RFWD3
WD40
Motif
Other DBs
NCBI-GeneID:
124307602
NCBI-ProteinID:
XP_046625405
LinkDB
All DBs
Position
6:28456568..28462934
Genome browser
AA seq
1006 aa
AA seq
DB search
MSSKGAIKKTAGSSTVLKTKNRQAGDASSDVLASPNSKDSKLTKLRDSKIQKTPQNSINK
LVSSRISSMDKPVGSQTKSIRQNGPGSTSISNTAASSPRTGAQLTSRTTTSGAKLVRQKI
EVEKRLKNVPPAERNKSKEKASKSYSEKRGSSSIYLPKTIRSSNAATTRTSSQVIASKTS
SVSTRDKQREGKSESPYKSAENKPRRTSRERKKSRTLSPSEIKMLHQAMKTDKAANDSLS
KKDNNLVKSHGEQNRTATNDNTDDYEYEDDFEDYESDFQECTDSEVSNVSEEQEISESPE
PEPIEMQREEQIKTINSADGRRSEEEHMLDSGHYELTEARKRAARIESMSMNQSKAPPLP
ELRQPINKSYRQEKTPENKSLPPSSTDEGFEDGRSGDFAKSPPVSQISFIDFQKPKDEKV
QKKLLSKSKRGEELLNMIKLDNVEWSLIEYTPIAYEDFIMNYGRLNTQQISVQTNEDNPE
TETQTESIEFINKWTQHPITCRRNLNNSEDVKLFKLEQIGVGEDTDCDETNTPIVPTYDI
LQLNEFLSKAGKVVLSLLEEKKVGGNVLRSNSHELPFSEGFIKLAVDSVSFLVDRTVSLL
HYSETLNKMLLSIHVLNSEGIETSNKEDYLTDCCIGCVWSTSEPSRPVKLFYSSCSITAC
CFHSTNYNVVFAGLEDGSINLWDLREDAMWHQKVTDKVNEVDWVLRSPTYTTADSVSDNY
HSSEIVAIRVVSYIEKDTSNASNNRLAPIQICTLDEEGELIVWSVLYTMGIRTDDLGLAH
WGDIRLQKTQQIAINTRRDKLEKIYTGYFDMHVDSVDTNNLFLATNTNSILHATCIGNKV
APNIYRGNEIEFCGGTRCIEGCPFKRSYFLVGCDDGTIRLHSLKIERALLQLIDDECKNP
VKSVQWSKSKPFTIFVLDSASKIHIWNLSNSDIYPMYTISTKKWGYVTSMQLSPCKTDHD
LINQYLALGTDNGRIEIHKLKKDFCYSQRNESDQELETFSRYVDIL
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaagggcgcaataaagaaaactgcagggtcgagtaccgtattaaaaacaaaa
aacagacaagcaggcgatgcatcttccgatgtcttggcgtcgcccaactcgaaagactca
aaacttacgaaactcagagattcgaagatacaaaaaaccccacagaactctattaacaag
ctggtatctagcaggattagttccatggataagcctgttggttctcaaaccaaatcaatc
aggcaaaatggtcctggatcaacatccatatccaatactgctgccagctctccgagaact
ggagcccagttgacgagcaggaccacaacctcgggagcaaaattagttaggcagaaaata
gaagtagagaaaaggctgaagaatgttccgccagcggaacggaataaatcaaaagagaag
gcgagcaaaagttactcggagaaaagaggatcaagttcgatatatttgccaaaaacgatt
agaagctctaacgctgctacaactagaacgtctagtcaagttattgcatcgaaaaccagt
tcggtgtctactcgcgataagcagagagaaggaaaatcggagagtccttataaatcagct
gagaacaagcctagacgaacgtcaagagaacgcaaaaaatccagaactcttagtcctagc
gaaataaagatgttacaccaggctatgaagactgataaagcagcaaatgatagtctgtca
aagaaagacaataacttggtaaaatcccacggagagcaaaatcgtaccgcgacaaacgac
aatactgatgattatgaatacgaagatgattttgaagattacgaatcggactttcaagag
tgtactgatagcgaagtgtcaaacgttagcgaggaacaggaaatttcagagagtcctgaa
cctgaaccaattgaaatgcaaagagaagagcagataaaaacgataaacagtgcagatgga
cgacggagcgaagaggagcatatgctagattctggtcactatgaactcacagaggctaga
aaacgagctgcacgcatagaatctatgtcaatgaatcagtcgaaggcaccaccattgcca
gaattgagacagcccataaataaatcgtataggcaagagaagacacccgaaaataagtca
ttacccccatcgtcgacggacgaaggttttgaggatgggagatctggagattttgctaaa
tctccacccgtatcacaaatatctttcatcgattttcaaaaaccaaaagacgagaaagtg
caaaagaaattgctgtcaaaatcgaaaagaggagaagaattgttgaacatgatcaaattg
gacaatgtcgaatggtctctcattgaatacacgcctatagcttatgaagattttataatg
aattatggacgattaaatactcaacagatctctgtacaaaccaacgaagataatcccgaa
acagaaacgcaaaccgagagtatcgaatttataaataaatggacccaacatcctataacg
tgtagaagaaatttgaacaacagtgaagacgtgaaattgtttaaattggaacaaatcggt
gttggcgaagatacagactgtgatgaaacgaacacaccaattgtaccgacttacgatatt
ctacagctgaatgagtttttgagtaaagcaggaaaagtcgtgctctcattgttagaagaa
aaaaaagttggaggaaacgtacttcggtctaattcgcacgagttacccttcagcgaaggc
ttcattaagcttgccgttgattcggtatcttttctagttgatagaacagtatcgctccta
cattactcagagactttgaataagatgttactgtcaatacacgttctgaacagtgaggga
attgaaacttcgaacaaggaagattatctaaccgactgttgcatcggatgtgtttggagt
acctcagaaccatcgaggccagtgaaactcttttactcatcttgttctataacagcttgc
tgttttcactcgacgaattacaacgtcgtatttgcaggcctagaagacgggtcaataaat
ctgtgggatcttagagaagatgcgatgtggcatcaaaaagtaaccgataaggtaaatgag
gtggactgggtgttgcgatcaccaacttacactacagccgacagtgtcagtgataattat
cacagttccgaaattgtcgcgattcgtgttgtatcttacattgaaaaagacacatcaaat
gcaagcaacaacagacttgcaccgattcagatttgcactttagacgaagaaggagagtta
attgtttggagtgtattatacaccatgggaattcgcacggatgatttaggattggctcac
tggggcgacattagacttcagaaaacccaacagattgcgataaacactagaagggataaa
ctggaaaagatttataccggctattttgatatgcatgttgatagcgttgatactaacaat
ctatttctggctactaataccaatagcatcttgcatgcaacgtgtattggcaacaaagtt
gcacccaacatttaccgagggaatgaaattgaattctgtggtggtactcgatgtattgaa
ggatgtcctttcaaacgatcgtactttctggtgggctgtgacgatggcactatacgactt
cattcgctgaagattgagcgagctcttttgcaattaattgacgatgaatgtaaaaaccca
gttaaatctgtacagtggtcaaaatccaagccgtttacaattttcgttttagacagtgcc
tccaaaatccacatatggaacctgagcaacagtgatatatatcctatgtataccatttca
acaaagaaatggggatacgtaacaagtatgcaattatccccatgcaaaactgatcacgat
ttgatcaaccaatatttggctcttggaacggataatggtcggattgagattcataagttg
aagaaggatttctgctacagtcaaagaaatgaatccgaccaggagctcgaaacgttttca
agatatgtagatattttgtag
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